Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0663
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   0.91 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   4.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   6.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   6.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   6.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   6.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   6.4  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    20   8.5  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 0.91
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 185 YVWML*KLFLVID*KFDEK 129
           +VW L KLFL+     DEK
Sbjct: 12  HVWFLSKLFLLCPRSIDEK 30



 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 237 NKMKHFLVLREY 272
           NK+KH L+ + Y
Sbjct: 116 NKLKHMLIWKSY 127


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 215 QIHLPSSNVYYVWM 174
           QIH  +++ +Y WM
Sbjct: 196 QIHQQTNHTFYPWM 209


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 132 KKVQEISMLYISRFKFSLAFTCTMKK 55
           KK     MLY+   +  +   CT+K+
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAECTLKE 505


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 132 KKVQEISMLYISRFKFSLAFTCTMKK 55
           KK     MLY+   +  +   CT+K+
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAECTLKE 397


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 114 ISPELFFIKFLINH*KQFLKHPH 182
           I P LFF+   +   + FL H H
Sbjct: 195 IPPYLFFVPPPLMFLQDFLSHQH 217


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 114 ISPELFFIKFLINH*KQFLKHPH 182
           I P LFF+   +   + FL H H
Sbjct: 428 IPPYLFFVPPPLMFLQDFLSHQH 450


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 114 ISPELFFIKFLINH*KQFLKHPH 182
           I P LFF+   +   + FL H H
Sbjct: 428 IPPYLFFVPPPLMFLQDFLSHQH 450


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 221 FIQIHLPSSNVYYVWML*KLFLVID*KFDEKKFRR 117
           F++ +L S    YV     LF+V+  K    K+R+
Sbjct: 37  FVKTYLVSDFENYVTFFCSLFIVVILKLILAKYRQ 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,984
Number of Sequences: 336
Number of extensions: 1414
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)