Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0662
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75543-13|CAI79192.1|  281|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z75543-12|CAA99874.4|  280|Caenorhabditis elegans Hypothetical p...    29   4.2  
AY728061-1|AAU43722.1|  281|Caenorhabditis elegans cadmium-induc...    29   4.2  
Z49132-10|CAE18050.1|  163|Caenorhabditis elegans Hypothetical p...    28   7.3  
U13019-13|AAC24450.1|  336|Caenorhabditis elegans Serpentine rec...    27   9.6  

>Z75543-13|CAI79192.1|  281|Caenorhabditis elegans Hypothetical
           protein K01D12.13b protein.
          Length = 281

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 558 ALLLYILYKCGKFHTPPPRNFRKKGYKVFASRINV*IYQ 442
           A  +Y +YK  KF TPP  N + K +K       V +YQ
Sbjct: 14  AAAIYAVYKINKFFTPPTINPKPKIHKTDFKIDTVYLYQ 52


>Z75543-12|CAA99874.4|  280|Caenorhabditis elegans Hypothetical
           protein K01D12.13a protein.
          Length = 280

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 558 ALLLYILYKCGKFHTPPPRNFRKKGYKVFASRINV*IYQ 442
           A  +Y +YK  KF TPP  N + K +K       V +YQ
Sbjct: 14  AAAIYAVYKINKFFTPPTINPKPKIHKTDFKIDTVYLYQ 52


>AY728061-1|AAU43722.1|  281|Caenorhabditis elegans
           cadmium-inducible lysosomal proteinCDR-7 protein.
          Length = 281

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 558 ALLLYILYKCGKFHTPPPRNFRKKGYKVFASRINV*IYQ 442
           A  +Y +YK  KF TPP  N + K +K       V +YQ
Sbjct: 14  AAAIYAVYKINKFFTPPTINPKPKIHKTDFKIDTVYLYQ 52


>Z49132-10|CAE18050.1|  163|Caenorhabditis elegans Hypothetical
           protein ZK666.12 protein.
          Length = 163

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
 Frame = -1

Query: 441 TTFVCLVKIY*CVLYELQ-SRDIFKNIVNFICSGY-SCFLLLTSSTRKRKKFEKKV 280
           T  V     Y C  YE   S  +F     F+   Y  CFLLL   T  RK F+  V
Sbjct: 104 TAMVLFYAKYICEKYESPLSYSLFSLFCLFLLPAYYRCFLLLKFKTSHRKMFKSMV 159


>U13019-13|AAC24450.1|  336|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 9 protein.
          Length = 336

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = -2

Query: 554 FFSIFSI-SVENFILLLLAIFVKRDTKFLLHV 462
           FF I+S+ S+  FILLLL IF+   T+F ++V
Sbjct: 63  FFVIYSMDSIVGFILLLLDIFI---TRFFVYV 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,944,452
Number of Sequences: 27780
Number of extensions: 256769
Number of successful extensions: 613
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)