Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0661
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.78 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.8  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.5  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 564 EYYLIIPCCKNVDILS-KFNVIFWKMD-LMV*FTSFHGYG 677
           +YY +  CC N+ I++  FN    K++  +V F  +H +G
Sbjct: 54  KYYWLNVCCLNLSIVTIFFNFATKKLEQFIVRFMKYHFFG 93


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 279 GGGRMSGTNDKAGGPN 326
           GGG  SG N   GGP+
Sbjct: 526 GGGSGSGNNQPPGGPS 541


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +1

Query: 208 LKMTAGNFYINDKST 252
           +K+TA +F+I DKST
Sbjct: 287 VKITAADFFILDKST 301


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +2

Query: 224 ATSISMTN-QLVCSRSAAIWRWP 289
           AT +S+   +L CS +AA+W  P
Sbjct: 45  ATGLSLPACRLFCSEAAALWPKP 67


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 401 IWIINISKWNKCFLNRLWSC 342
           +W+INIS    C+    +SC
Sbjct: 134 VWLINISATYICYAFGKFSC 153


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 4/9 (44%), Positives = 8/9 (88%)
 Frame = -2

Query: 106 YLYHYIHKW 80
           ++YH++H W
Sbjct: 102 FIYHFLHSW 110


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 401 IWIINISKWNKCFLNRLWSC 342
           +W+INIS    C+    +SC
Sbjct: 367 VWLINISATYICYAFGKFSC 386


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 401 IWIINISKWNKCFLNRLWSC 342
           +W+INIS    C+    +SC
Sbjct: 367 VWLINISATYICYAFGKFSC 386


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 4/9 (44%), Positives = 8/9 (88%)
 Frame = -2

Query: 106 YLYHYIHKW 80
           ++YH++H W
Sbjct: 102 FIYHFLHSW 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,876
Number of Sequences: 336
Number of extensions: 3122
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)