Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0661
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde dehy... 97 8e-21
AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde dehy... 75 6e-14
Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical p... 42 4e-04
AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde dehy... 38 0.007
Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical pr... 36 0.028
U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde dehydr... 33 0.15
AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde dehy... 32 0.34
AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde dehy... 32 0.34
AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde dehy... 32 0.34
U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde dehydr... 30 1.4
U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde dehydr... 30 1.4
AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde dehy... 29 3.2
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 29 4.2
U55856-4|AAK68354.1| 443|Caenorhabditis elegans Synaptotagmin p... 28 7.3
AJ303370-1|CAC33881.1| 155|Caenorhabditis elegans synaptotagmin... 28 7.3
>AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform a protein.
Length = 563
Score = 97.5 bits (232), Expect = 8e-21
Identities = 41/83 (49%), Positives = 60/83 (72%)
Frame = +1
Query: 7 EPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVF 186
EPT+I TDP KL+TEE+FGPV+T+ VY D +D+ + + +T + LTGA+F++D+ F
Sbjct: 430 EPTLITVTDPKSKLLTEEMFGPVVTVLVYEDSKVDEVLATVKDATPYGLTGAVFSQDKEF 489
Query: 187 LKKAYENLKMTAGNFYINDKSTG 255
L +A + L+ GN Y+NDKSTG
Sbjct: 490 LYRARDVLRDAVGNMYLNDKSTG 512
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +3
Query: 255 SVVGQQPFGGGRMSGTNDKAGGPNYVMRWTTPQSIKETFVPLTDIDYPYM 404
S+VGQQPFGG R+SGTNDKAGGP+Y +RWT+P +IKET V LTD YP M
Sbjct: 513 SIVGQQPFGGSRLSGTNDKAGGPHYGLRWTSPLTIKETSVSLTDWKYPSM 562
>AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform b protein.
Length = 512
Score = 74.5 bits (175), Expect = 6e-14
Identities = 30/61 (49%), Positives = 45/61 (73%)
Frame = +1
Query: 7 EPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVF 186
EPT+I TDP KL+TEE+FGPV+T+ VY D +D+ + + +T + LTGA+F++D+ F
Sbjct: 430 EPTLITVTDPKSKLLTEEMFGPVVTVLVYEDSKVDEVLATVKDATPYGLTGAVFSQDKEF 489
Query: 187 L 189
L
Sbjct: 490 L 490
>Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFL 189
PTI+ D + +EE FGP++ + ++D DI+ + T+F L +F +D
Sbjct: 794 PTILSNIDDENFAASEESFGPIMCVSSFDDDDIEDVLRR-ANDTEFGLAAGVFTRDSSKS 852
Query: 190 KKAYENLKMTAGNFYIN 240
+ E L AG ++N
Sbjct: 853 LRVAEALH--AGTVFVN 867
>Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFL 189
PTI+ D + +EE FGP++ + ++D DI+ + T+F L +F +D
Sbjct: 794 PTILSNIDDENFAASEESFGPIMCVSSFDDDDIEDVLRR-ANDTEFGLAAGVFTRDSSKS 852
Query: 190 KKAYENLKMTAGNFYIN 240
+ E L AG ++N
Sbjct: 853 LRVAEALH--AGTVFVN 867
>AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde
dehydrogenase protein 5 protein.
Length = 437
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFL 189
PT+++ + D M +EIFGPVL I K++ +++D I K L IF KD+ +
Sbjct: 322 PTVLDV-EKTDPFMHDEIFGPVLPIITV--KNLCESIDFINKGEK-PLAAYIFTKDEAKV 377
Query: 190 KKAYENLKMTAGNFYIND 243
++ + T+G +ND
Sbjct: 378 QRFLN--ETTSGGVTVND 393
>Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical
protein F45H10.1 protein.
Length = 569
Score = 35.9 bits (79), Expect = 0.028
Identities = 17/71 (23%), Positives = 37/71 (52%)
Frame = +1
Query: 4 HEPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQV 183
+EPT+I + + EIFGP+ ++ + D+ + ++ + + L G +F +DQ
Sbjct: 379 YEPTLITNVQSNTNIAHTEIFGPIASVQKFRDE--QEVLE-AANNCRVGLAGYVFGRDQS 435
Query: 184 FLKKAYENLKM 216
L++ L++
Sbjct: 436 RLQRVARKLEV 446
>U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde
dehydrogenase protein 10 protein.
Length = 506
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFL 189
PT+I K+MT+EIFGPV+ I + D + + ST + L+ +++ D L
Sbjct: 390 PTVIVGLHDASKVMTDEIFGPVVCITPF---DTAEEVIERANSTPYGLSATVWSSDSDEL 446
Query: 190 KKAYENLKMTAGNFYIN 240
L+ AG + N
Sbjct: 447 LNTANELR--AGTVWCN 461
>AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform c protein.
Length = 494
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/78 (26%), Positives = 40/78 (51%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFL 189
PT+++ + D M +EIFGPVL I + ++++ I K L IF +++ +
Sbjct: 319 PTVLDV-EKSDPFMHDEIFGPVLPIITV--QSFSESLEYIADGEK-PLAAYIFTRNEAKV 374
Query: 190 KKAYENLKMTAGNFYIND 243
K+ + ++G +ND
Sbjct: 375 KRLLN--ETSSGGVTVND 390
>AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform b protein.
Length = 493
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/78 (26%), Positives = 40/78 (51%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFL 189
PT+++ + D M +EIFGPVL I + ++++ I K L IF +++ +
Sbjct: 319 PTVLDV-EKSDPFMHDEIFGPVLPIITV--QSFSESLEYIADGEK-PLAAYIFTRNEAKV 374
Query: 190 KKAYENLKMTAGNFYIND 243
K+ + ++G +ND
Sbjct: 375 KRLLN--ETSSGGVTVND 390
>AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform a protein.
Length = 493
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/78 (26%), Positives = 40/78 (51%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFL 189
PT+++ + D M +EIFGPVL I + ++++ I K L IF +++ +
Sbjct: 319 PTVLDV-EKSDPFMHDEIFGPVLPIITV--QSFSESLEYIADGEK-PLAAYIFTRNEAKV 374
Query: 190 KKAYENLKMTAGNFYIND 243
K+ + ++G +ND
Sbjct: 375 KRLLN--ETSSGGVTVND 390
>U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform b protein.
Length = 422
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 7 EPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVF 186
+PTI + EEIFGPV+TI + D + + +T + L + KD
Sbjct: 304 KPTIFANVKDQMTIAQEEIFGPVMTIIRF---DTMEELVEKANNTIYGLAAGVMTKD--- 357
Query: 187 LKKAYENLKMT-AGNFYIN 240
+ KA T AG+ ++N
Sbjct: 358 IDKALHIANATRAGSVWVN 376
>U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform a protein.
Length = 510
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 7 EPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVF 186
+PTI + EEIFGPV+TI + D + + +T + L + KD
Sbjct: 392 KPTIFANVKDQMTIAQEEIFGPVMTIIRF---DTMEELVEKANNTIYGLAAGVMTKD--- 445
Query: 187 LKKAYENLKMT-AGNFYIN 240
+ KA T AG+ ++N
Sbjct: 446 IDKALHIANATRAGSVWVN 464
>AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde
dehydrogenase protein 2 protein.
Length = 537
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 7 EPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKD--IDKTMDLIGTSTKFALTGAIFAKDQ 180
+PTI + K+ EEIFGPV+ + ++ + I+K +T + L + D
Sbjct: 419 KPTIFANVNDQMKIAQEEIFGPVMIVIRFDSMEELIEK-----ANNTIYGLAAGVVTND- 472
Query: 181 VFLKKAYENLK-MTAGNFYIN 240
L KA + + AG+ ++N
Sbjct: 473 --LNKALQVANTIRAGSVWVN 491
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFL 189
PTI+ P+ EEIFGPVL V +++++ +++I + + AIF +
Sbjct: 391 PTILAGVKPNMTCYREEIFGPVLV--VMEAENLNEAIEII-NNNPYGNGTAIFTSNGATA 447
Query: 190 KK 195
+K
Sbjct: 448 RK 449
>U55856-4|AAK68354.1| 443|Caenorhabditis elegans Synaptotagmin
protein 1, isoform b protein.
Length = 443
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 76 LTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFLKKAYENLKMTAGNFYIND 243
LT+ + K++ K MD+ G S + +F +D+ LKK N+K N Y N+
Sbjct: 309 LTVVILEAKNLKK-MDVGGLSDPYVKL-EMFGEDRKRLKKKKTNIKRKTLNPYFNE 362
>AJ303370-1|CAC33881.1| 155|Caenorhabditis elegans synaptotagmin 1
protein.
Length = 155
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 76 LTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFLKKAYENLKMTAGNFYIND 243
LT+ + K++ K MD+ G S + +F +D+ LKK N+K N Y N+
Sbjct: 28 LTVVILEAKNLKK-MDVGGLSDPYVKL-EMFGEDRKRLKKKKTNIKRKTLNPYFNE 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,990,883
Number of Sequences: 27780
Number of extensions: 261658
Number of successful extensions: 502
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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