Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0661
(695 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein c... 36 0.034
At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)... 35 0.045
At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)... 35 0.045
At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identica... 34 0.078
At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identic... 33 0.14
At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putativ... 33 0.18
At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial (... 33 0.18
At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putativ... 32 0.32
At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putativ... 32 0.32
At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putativ... 32 0.32
At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogena... 32 0.42
At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar ... 31 0.73
At5g62530.1 68418.m07848 delta-1-pyrroline-5-carboxylate dehydro... 30 1.7
At4g19240.1 68417.m02838 expressed protein 28 5.1
At4g03390.1 68417.m00461 leucine-rich repeat transmembrane prote... 28 5.1
At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase (S... 28 6.8
>At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein
contais aldehyde dehydrogenase (NADP) family protein
domain, Pfam:PF00171
Length = 484
Score = 35.5 bits (78), Expect = 0.034
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 7 EPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTK 144
EPTI+ ++M EEIFGP+L I +DI +++ +I T K
Sbjct: 329 EPTILLDPPLDSEIMNEEIFGPILPIITV--RDIQESIGIINTKPK 372
>At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/78 (30%), Positives = 43/78 (55%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFL 189
PTI+ +M+EEIFGP+L I N +++++ D+I + K L +F ++ L
Sbjct: 331 PTILLDVPLDSLIMSEEIFGPLLPILTLN--NLEESFDVIRSRPK-PLAAYLFTHNKK-L 386
Query: 190 KKAYENLKMTAGNFYIND 243
K+ + ++AG +ND
Sbjct: 387 KERFA-ATVSAGGIVVND 403
>At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/78 (30%), Positives = 43/78 (55%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFL 189
PTI+ +M+EEIFGP+L I N +++++ D+I + K L +F ++ L
Sbjct: 331 PTILLDVPLDSLIMSEEIFGPLLPILTLN--NLEESFDVIRSRPK-PLAAYLFTHNKK-L 386
Query: 190 KKAYENLKMTAGNFYIND 243
K+ + ++AG +ND
Sbjct: 387 KERFA-ATVSAGGIVVND 403
>At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identical
to aldehyde dehydrogenase [Arabidopsis thaliana]
GI:8574427; similar to mitochondrial aldehyde
dehydrogenase [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; identical to cDNA aldehyde
dehydrogenase AtALDH2a GI:20530140
Length = 538
Score = 34.3 bits (75), Expect = 0.078
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +1
Query: 7 EPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVF 186
+PT+ + +EIFGPV +I ++ D+D+ + TK+ L +F K+
Sbjct: 419 QPTVFSNVKDDMLIAQDEIFGPVQSILKFS--DVDEVIKR-ANETKYGLAAGVFTKNLDT 475
Query: 187 LKKAYENLKMTAGNFYIN 240
+ LK AG ++N
Sbjct: 476 ANRVSRALK--AGTVWVN 491
>At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identical
to aldehyde dehydrogenase ALDH1a [Arabidopsis thaliana]
gi|20530143|gb|AAM27004
Length = 501
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +1
Query: 7 EPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVF 186
+PTI K+ +EIFGPV+++ + K +++ + +TK+ L I ++D
Sbjct: 382 QPTIFADVTEDMKIYQDEIFGPVMSLMKF--KTVEEGIK-CANNTKYGLAAGILSQDIDL 438
Query: 187 LKKAYENLKMTAGNFYIN 240
+ ++K AG ++N
Sbjct: 439 INTVSRSIK--AGIIWVN 454
>At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795
Length = 503
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 7 EPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKD 177
EP I+ ++ EE+FGP L + ++ + D+ + L S ++ L GA+ + D
Sbjct: 376 EPAIVSNVTTSMEIWREEVFGPALCVKTFSTE--DEAIQLANDS-QYGLAGAVLSND 429
>At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial
(ALDH3) nearly identical to mitochondrial aldehyde
dehydrogenase ALDH3 [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein
Length = 534
Score = 33.1 bits (72), Expect = 0.18
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 7 EPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVF 186
+PT+ + T+EIFGPV TI + KD+D+ + S ++ L +F ++
Sbjct: 415 QPTVFSDVKDDMLIATDEIFGPVQTILKF--KDLDEVIARANNS-RYGLAAGVFTQN--- 468
Query: 187 LKKAYENLK-MTAGNFYIN 240
L A+ ++ + G +IN
Sbjct: 469 LDTAHRLMRALRVGTVWIN 487
>At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 596
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFA 171
PT++ + + K+M EE FGP++ I ++ D+ + + +++AL A+F+
Sbjct: 417 PTVLINVNHNMKIMKEEAFGPIMPIMQFS---TDEEVIKLANDSRYALGCAVFS 467
>At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 554
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFA 171
PT++ + + K+M EE FGP++ I ++ D+ + + +++AL A+F+
Sbjct: 417 PTVLINVNHNMKIMKEEAFGPIMPIMQFS---TDEEVIKLANDSRYALGCAVFS 467
>At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putative
identical to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795; strong similarity to betaine aldehyde
dehydrogenase [Amaranthus hypochondriacus] GI:2388710
Length = 501
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 7 EPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKD 177
EPTII ++ EE+FGPVL + + + D+ ++L S + L A+ + D
Sbjct: 376 EPTIITDVTTSMQIWREEVFGPVLCVKTFASE--DEAIELANDS-HYGLGAAVISND 429
>At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogenase,
putative similar to methylmalonate-semialdehyde
dehydrogenase [acylating], mitochondrial precursor
(MMSDH) [Rattus norvegicus] SWISS-PROT:Q02253
Length = 607
Score = 31.9 bits (69), Expect = 0.42
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFL 189
PTI+ P + EEIFGPVL N D+ + +I K+ AIF
Sbjct: 475 PTILSGVTPDMECYKEEIFGPVLVCMQAN--SFDEAISII-NKNKYGNGAAIFTSSGAAA 531
Query: 190 KKAYENLKMTAGNFYIN 240
+K + + AG IN
Sbjct: 532 RKF--QMDIEAGQIGIN 546
>At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 550
Score = 31.1 bits (67), Expect = 0.73
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +1
Query: 10 PTIIETTDPHDKLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFL 189
PTI+ +M EEIFGP+L I + I+ +I + K L +F ++
Sbjct: 394 PTILLDVPEASSMMQEEIFGPLLPIITV--QKIEDGFQVIRSKPK-PLAAYLFTNNKELE 450
Query: 190 KKAYENLKMTAGNFYIND 243
K+ ++ ++AG IND
Sbjct: 451 KQFVQD--VSAGGITIND 466
>At5g62530.1 68418.m07848 delta-1-pyrroline-5-carboxylate
dehydrogenase (P5CDH) identical to
delta-1-pyrroline-5-carboxylate dehydrogenase precursor
[Arabidopsis thaliana] gi|15383744|gb|AAK73756;
identical to cDNA delta-1-pyrroline-5-carboxylate
dehydrogenase precursor (P5CDH) nuclear gene for
mitochondrial product GI:15383743; contains Pfam profile
PF00171:aldehyde dehydrogenase (NAD) family protein
Length = 556
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 43 KLMTEEIFGPVLTIYVYNDKDIDKTMDLIGTSTKFALTGAIFAKDQVFLKKAYEN 207
+L+T+EIFGP + Y + ++ + LT A+ + D +FL++ N
Sbjct: 436 ELVTKEIFGPFQIVTEYKKDQLPLVLEAL-ERMHAHLTAAVVSNDPIFLQEVIGN 489
>At4g19240.1 68417.m02838 expressed protein
Length = 366
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 335 HDIVGTTCLVIST*HTATSKWLLTDYRPVDLSLI*KLPAVIL 210
H IVGT L H + D+ P D+SL+ KL ++L
Sbjct: 213 HSIVGTLVLEEPCNHNTRNLLHRVDWLPTDVSLVLKLSGLVL 254
>At4g03390.1 68417.m00461 leucine-rich repeat transmembrane protein
kinase, putative similar to Z. mays leucine-rich repeat
transmembrane protein kinase LRRTPK 1, GenBank accession
number AF023164
Length = 776
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 285 GRMSGTNDKAGGPNYVMRWTTPQ 353
GRMS D++ G +++RW PQ
Sbjct: 685 GRMSYDRDRSRGEQFLVRWAIPQ 707
>At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase
(SSADH1) similar to succinate-semialdehyde dehydrogenase
[NADP+] (SSDH) [Escherichia coli] SWISS-PROT:P25526;
identical to succinic semialdehyde dehydrogenase mRNA,
nuclear gene encoding mitochondrial protein GI:6684441;
contains TIGRfam profile TIGR01780:succinic semialdehyde
dehydrogenase; contains Pfam profile PF00171: aldehyde
dehydrogenase (NAD) family protein
Length = 528
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 4 HEPTIIETTDPHDKLMTEEIFGPVLTIYVYNDKD--IDKTMDLIGTSTKFALTGAIFAKD 177
+EPT+I + + EEIFGPV + + ++ I D I + T ++
Sbjct: 410 YEPTVIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSW 469
Query: 178 QVF 186
+VF
Sbjct: 470 RVF 472
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,024,723
Number of Sequences: 28952
Number of extensions: 234419
Number of successful extensions: 437
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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