Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0659
(667 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 165 8e-40
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 124 2e-27
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 120 3e-26
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 119 5e-26
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 119 7e-26
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 115 1e-24
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 111 1e-23
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 109 4e-23
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 105 1e-21
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 104 2e-21
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 103 5e-21
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 103 5e-21
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 102 9e-21
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 102 9e-21
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 101 2e-20
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 99 1e-19
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 98 1e-19
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 97 4e-19
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 93 7e-18
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 92 1e-17
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 92 1e-17
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 91 3e-17
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 89 1e-16
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 88 2e-16
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 86 8e-16
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 84 3e-15
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 83 8e-15
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 81 3e-14
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 80 4e-14
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 79 1e-13
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 78 2e-13
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 77 3e-13
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 76 7e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 75 2e-12
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 74 3e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 74 4e-12
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 73 8e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 73 8e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 71 3e-11
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 69 8e-11
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 69 8e-11
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 69 1e-10
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 69 1e-10
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 68 2e-10
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 68 2e-10
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 67 4e-10
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 66 7e-10
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 66 9e-10
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 65 2e-09
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 64 2e-09
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 64 2e-09
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 64 2e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 64 3e-09
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 63 5e-09
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 63 7e-09
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 62 9e-09
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 62 1e-08
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 62 2e-08
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 61 3e-08
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 60 4e-08
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 60 4e-08
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 60 5e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 60 6e-08
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 60 6e-08
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 59 8e-08
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 59 8e-08
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 59 8e-08
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 59 1e-07
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 59 1e-07
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 58 1e-07
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 58 2e-07
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 58 3e-07
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 57 3e-07
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 56 6e-07
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 56 6e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 56 6e-07
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 56 6e-07
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 56 8e-07
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 56 8e-07
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 56 8e-07
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 55 2e-06
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 54 2e-06
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 54 3e-06
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 54 3e-06
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 54 4e-06
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 52 9e-06
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 52 9e-06
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 51 3e-05
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 50 4e-05
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 50 7e-05
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 49 9e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 44 0.004
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 42 0.018
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 41 0.031
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 40 0.071
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 38 0.16
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.38
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 37 0.50
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 36 0.66
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 36 0.88
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.0
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.0
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 34 2.7
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 3.5
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 3.5
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 33 4.7
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 33 4.7
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 33 4.7
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 8.2
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 8.2
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 165 bits (401), Expect = 8e-40
Identities = 74/108 (68%), Positives = 85/108 (78%)
Frame = +1
Query: 268 FISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 447
F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +NLCY SNW+I IYCLS
Sbjct: 23 FMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSDNLCYISNWIISIYCLS 82
Query: 448 SSYIHCRYRY*YTSIFYFSYLIIAVPTGIKIFR*LATIHGTQINYNPN 591
SSYI+ Y Y++ F + +IIAVPTGIKIF LAT HGTQINY+P+
Sbjct: 83 SSYIYSSNSYWYSTYFTSATMIIAVPTGIKIFSWLATFHGTQINYSPS 130
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 124 bits (299), Expect = 2e-27
Identities = 59/94 (62%), Positives = 67/94 (71%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPILYQHLF FFGHPEVYILILPGFGIISH+I E GKKETF F
Sbjct: 210 GDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGF 269
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
IV AHH+FT+G+D+DTRAYFTSAT ++ +K
Sbjct: 270 IVWAHHMFTIGMDVDTRAYFTSATMIIAIPTGIK 303
Score = 71.7 bits (168), Expect = 1e-11
Identities = 40/83 (48%), Positives = 47/83 (56%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDL IFSLHLAG SS + D++ LF +V ITA
Sbjct: 126 SVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPV 185
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
AGAIT+LLTDRN+NTSFFDP+G
Sbjct: 186 LAGAITMLLTDRNMNTSFFDPSG 208
Score = 32.7 bits (71), Expect = 8.2
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINYN 585
F + +IIA+PTGIKIF +AT G ++ N
Sbjct: 289 FTSATMIIAIPTGIKIFSWMATFSGVKLMNN 319
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 120 bits (289), Expect = 3e-26
Identities = 56/84 (66%), Positives = 62/84 (73%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPILYQHLF FFGHPEVYILILPGFGIISH+++ GKKE F F
Sbjct: 226 GDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGF 285
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
IV AHH+FTVG+D+DTRAYFTSAT
Sbjct: 286 IVWAHHMFTVGMDVDTRAYFTSAT 309
Score = 72.5 bits (170), Expect = 8e-12
Identities = 42/83 (50%), Positives = 46/83 (55%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDL IFSLHLAG+SS S Q PLFV AV +TA
Sbjct: 142 SVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPV 201
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
A IT+LLTDRNLNT+FFDPAG
Sbjct: 202 LAAGITMLLTDRNLNTTFFDPAG 224
Score = 36.3 bits (80), Expect = 0.66
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINY 582
F + +IIA+PTG+K+F LAT+HG I +
Sbjct: 305 FTSATMIIAIPTGVKVFSWLATLHGGAIKW 334
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 119 bits (287), Expect = 5e-26
Identities = 56/84 (66%), Positives = 62/84 (73%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE F F
Sbjct: 226 GDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGF 285
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
IV AHH+FTVG+D+DTRAYFTSAT
Sbjct: 286 IVWAHHMFTVGMDVDTRAYFTSAT 309
Score = 70.5 bits (165), Expect = 3e-11
Identities = 41/83 (49%), Positives = 46/83 (55%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDL IFSLHLAG+SS + Q PLFV +V ITA
Sbjct: 142 SVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPV 201
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
A IT+LLTDRNLNT+FFDPAG
Sbjct: 202 LAAGITMLLTDRNLNTTFFDPAG 224
Score = 37.1 bits (82), Expect = 0.38
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINYN 585
F + +IIA+PTG+K+F LAT+HG+ + ++
Sbjct: 305 FTSATMIIAIPTGVKVFSWLATLHGSNMKWS 335
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 119 bits (286), Expect = 7e-26
Identities = 55/84 (65%), Positives = 62/84 (73%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F F
Sbjct: 226 GDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGF 285
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
IV AHH+FTVG+D+DTRAYFTSAT
Sbjct: 286 IVWAHHMFTVGMDVDTRAYFTSAT 309
Score = 70.1 bits (164), Expect = 4e-11
Identities = 40/83 (48%), Positives = 46/83 (55%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDL IFSLHLAG+SS + Q PLFV +V +TA
Sbjct: 142 SVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPV 201
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
A IT+LLTDRNLNT+FFDPAG
Sbjct: 202 LAAGITMLLTDRNLNTTFFDPAG 224
Score = 36.3 bits (80), Expect = 0.66
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINY 582
F + +IIA+PTG+K+F LAT+HG I +
Sbjct: 305 FTSATMIIAIPTGVKVFSWLATLHGGAIKW 334
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 115 bits (276), Expect = 1e-24
Identities = 57/121 (47%), Positives = 72/121 (59%)
Frame = +2
Query: 176 TTCFSWSYYNIINRSKLKYIIF*SCWRGDPILYQHLF*FFGHPEVYILILPGFGIISHII 355
++ SW N S F GD IL+QHLF FFGHPEVYILILPGFG+ISH+I
Sbjct: 176 SSSISWGNNNASYSSNYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVI 235
Query: 356 SQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQEL 535
+ GK+E F F+V AHH+FTVG+D+DTRAYFT+AT ++ +
Sbjct: 236 AHYSGKREPFGYLGMVYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGI 295
Query: 536 K 538
K
Sbjct: 296 K 296
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINYNPNYF 597
F + +IIAVPTGIK+F +AT+ G+ + + F
Sbjct: 282 FTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLF 316
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 111 bits (268), Expect = 1e-23
Identities = 55/94 (58%), Positives = 64/94 (68%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPILYQHLF FFGHPEVYILILPGFGIISHI+S G K F F
Sbjct: 229 GDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPVFGYLGMVYAMISIGVLGF 287
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
+V AHH+FTVG+D+DTRAYFT+AT ++ +K
Sbjct: 288 LVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIK 321
Score = 77.0 bits (181), Expect = 4e-13
Identities = 41/83 (49%), Positives = 50/83 (60%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
+VDLAIFSLHL+G+SS + +LPLFV +V +TAF
Sbjct: 145 AVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPV 204
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
AGAIT+LLTDRN NT+FFDPAG
Sbjct: 205 LAGAITMLLTDRNFNTTFFDPAG 227
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINY 582
F + +IIAVPTGIKIF +AT+ G I Y
Sbjct: 307 FTAATMIIAVPTGIKIFSWIATMWGGSIQY 336
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 109 bits (263), Expect = 4e-23
Identities = 58/129 (44%), Positives = 70/129 (54%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPILYQHLF FFGHPEVYILILPGFG+ISHI+S +K F F
Sbjct: 234 GDPILYQHLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPVFGYIGMVYAMVSIGVLGF 292
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELKFLDD*LQYMEXXXXXXXXXXXXXRFC 616
IV AHH++TVG+D+DTRAYFT+AT ++ +K E F
Sbjct: 293 IVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFI 352
Query: 617 IFIPVGGFT 643
+GG T
Sbjct: 353 FLFTIGGLT 361
Score = 70.5 bits (165), Expect = 3e-11
Identities = 38/83 (45%), Positives = 48/83 (57%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
+VDLAIFSLH++G SS S ++PLFV ++ +TAF
Sbjct: 150 AVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPV 209
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
AGAIT+LLTDRN NTSFFD +G
Sbjct: 210 LAGAITMLLTDRNFNTSFFDASG 232
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 105 bits (251), Expect = 1e-21
Identities = 49/94 (52%), Positives = 63/94 (67%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPILYQHLF FFGHPEVYILI+PGFG++SHI+S G K F F
Sbjct: 226 GDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPVFGYLGMVYAMFSIGILGF 284
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
+V +HH++ VG+D+DTRAYFT+AT ++ +K
Sbjct: 285 LVWSHHMYAVGLDVDTRAYFTAATMIIAVPTGIK 318
Score = 77.4 bits (182), Expect = 3e-13
Identities = 42/83 (50%), Positives = 49/83 (59%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 142 SVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPV 201
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
AGAIT+LLTDRN NTSF+DPAG
Sbjct: 202 LAGAITMLLTDRNFNTSFYDPAG 224
Score = 33.9 bits (74), Expect = 3.5
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHG 567
F + +IIAVPTGIKIF LAT++G
Sbjct: 304 FTAATMIIAVPTGIKIFSWLATLYG 328
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 104 bits (250), Expect = 2e-21
Identities = 50/94 (53%), Positives = 62/94 (65%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPILY+HLF FFGHPEVYILI+PGFGIISH++S KK F F
Sbjct: 227 GDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEISMVYAMASIGLLGF 285
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
+V +HH++ VG+D DTRAYFTSAT ++ +K
Sbjct: 286 LVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIK 319
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/83 (42%), Positives = 44/83 (53%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 143 SVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPV 202
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
+ IT+LL DRN NTSFF+ +G
Sbjct: 203 LSAGITMLLLDRNFNTSFFEVSG 225
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 103 bits (246), Expect = 5e-21
Identities = 47/84 (55%), Positives = 55/84 (65%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPIL+QHLF FFGHPEVYILILP FG+ISHI+ + K F F
Sbjct: 229 GDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWASMGIAWMGF 288
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+V HH+F G+DIDTRAYFT+AT
Sbjct: 289 LVWGHHMFVAGLDIDTRAYFTAAT 312
Score = 43.2 bits (97), Expect = 0.006
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXXXXX 185
+DLA+FSLH+AG+SS F L P+ + + T+
Sbjct: 145 IDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPV 204
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
A +T+LL DR+ +TSF+ P G
Sbjct: 205 LAAGLTLLLLDRHFSTSFYYPEG 227
Score = 32.7 bits (71), Expect = 8.2
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHG 567
F + L+IAVPTG+K+F LATI G
Sbjct: 308 FTAATLMIAVPTGVKVFNWLATIFG 332
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 103 bits (246), Expect = 5e-21
Identities = 50/94 (53%), Positives = 61/94 (64%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPILYQHLF FFGHPEVYILI+PGFGIIS IS K F F
Sbjct: 227 GDPILYQHLFWFFGHPEVYILIIPGFGIISTTIS-ANSNKSVFGYLGMVYAMCSIGILGF 285
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
+V +HH++TVG+D+DTRAYFT+AT ++ +K
Sbjct: 286 VVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIK 319
Score = 62.9 bits (146), Expect = 7e-09
Identities = 38/83 (45%), Positives = 43/83 (51%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIF LHL+GISS +L LF AV ITA
Sbjct: 143 SVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPV 202
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
AG IT++LTDRN NTSFF+ AG
Sbjct: 203 LAGGITMVLTDRNFNTSFFEVAG 225
Score = 37.1 bits (82), Expect = 0.38
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINYNPN 591
F + LIIAVPTGIKIF LAT +G +++ P+
Sbjct: 305 FTAATLIIAVPTGIKIFSWLATCYGGSLHFIPS 337
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 102 bits (244), Expect = 9e-21
Identities = 68/147 (46%), Positives = 71/147 (48%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIFSLHLAGISS SFDQ+PLFV AVGITAF
Sbjct: 139 SVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPV 198
Query: 186 XAGAITILLTDRNLNTSFFDPAGEETQFYINIXXXXXXXXXXXXXXXQDLV*FLILFHXX 365
AGAIT+LLTDRNLNTSFFDPAG QDLV F +LF
Sbjct: 199 LAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQDLVSFHMLFPKK 258
Query: 366 XXXXXXXXXXXXFMLY*QLGY*DLLFE 446
FM L Y DLLFE
Sbjct: 259 VEKSKLLVVSVSFMQSWLLVYSDLLFE 285
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 102 bits (244), Expect = 9e-21
Identities = 49/94 (52%), Positives = 60/94 (63%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPI YQH F FFGHPEVYILI+PGFGI+SHI+S KK F F
Sbjct: 227 GDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEISMVYAMASIGLLGF 285
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
+V +HH++ VG+D DTRAYFTSAT ++ +K
Sbjct: 286 LVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIK 319
Score = 66.1 bits (154), Expect = 7e-10
Identities = 38/83 (45%), Positives = 44/83 (53%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIFSLHL ISS S ++PLFV A+ ITAF
Sbjct: 143 SVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPV 202
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
+ IT+LL DRN NTSFF+ AG
Sbjct: 203 LSAGITMLLMDRNFNTSFFEVAG 225
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQI 576
F + +IIA+PTGIKIF LATI+G I
Sbjct: 305 FTSATMIIAIPTGIKIFSWLATIYGGSI 332
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 101 bits (242), Expect = 2e-20
Identities = 49/84 (58%), Positives = 57/84 (67%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GD ILYQHLF FFGHPEVYILI+PGFGIIS +IS K F F
Sbjct: 253 GDAILYQHLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNVFGYLGMVYAMMSIGLLGF 311
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
IV +HH++TVG+D+DTRAYFT+AT
Sbjct: 312 IVWSHHMYTVGLDVDTRAYFTAAT 335
Score = 60.1 bits (139), Expect = 5e-08
Identities = 37/82 (45%), Positives = 42/82 (51%)
Frame = +3
Query: 9 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 188
VDL IF LHL+GISS +L LF AV ITA
Sbjct: 170 VDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVL 229
Query: 189 AGAITILLTDRNLNTSFFDPAG 254
A AIT+LLTDRNLNTSF++ AG
Sbjct: 230 AAAITMLLTDRNLNTSFYELAG 251
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINY-NPNYFMKD*VLYF 621
F + LIIA+PTG+KIF LAT +G +++ P F V+ F
Sbjct: 331 FTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMF 374
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 98.7 bits (235), Expect = 1e-19
Identities = 48/84 (57%), Positives = 56/84 (66%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GD +LYQHLF FFGHPEVYILILPGFG++SHII+ KK F F
Sbjct: 230 GDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRVFGHVPMIAAMLMIGLIGF 288
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
IV AHH++T GID T+AYFT+AT
Sbjct: 289 IVWAHHMYTSGIDTSTKAYFTAAT 312
Score = 64.1 bits (149), Expect = 3e-09
Identities = 36/83 (43%), Positives = 41/83 (49%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDL IFS HL GI S LPLFV +V +T+F
Sbjct: 146 SVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPV 205
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
A AIT+LL DRN NTSF+DP G
Sbjct: 206 LAAAITLLLFDRNFNTSFYDPVG 228
Score = 37.1 bits (82), Expect = 0.38
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQI-NYNPNYFMKD*VLYF 621
F + ++IA+PTGIK+F +AT+ G I Y P YF V+ F
Sbjct: 308 FTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYFAAGFVVLF 351
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 98.3 bits (234), Expect = 1e-19
Identities = 46/73 (63%), Positives = 52/73 (71%)
Frame = +2
Query: 290 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 469
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 470 IDIDTRAYFTSAT 508
+D+DTRAYFTSAT
Sbjct: 62 MDVDTRAYFTSAT 74
Score = 37.1 bits (82), Expect = 0.38
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINYN 585
F + +IIA+PTG+K+F LAT+HG I ++
Sbjct: 70 FTSATMIIAIPTGVKVFSWLATLHGGSIKWD 100
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 96.7 bits (230), Expect = 4e-19
Identities = 47/95 (49%), Positives = 59/95 (62%)
Frame = +2
Query: 233 IIF*SCWRGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 412
+ F + GDPILYQHLF FFGHPEVYILILP FG+ISH+IS + F
Sbjct: 224 LFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNY-CRNLFGNQSMILAM 282
Query: 413 XXXXXXXFIV*AHHIFTVGIDIDTRAYFTSAT*LL 517
+V HH++T G+++DTRAYFTS T L+
Sbjct: 283 GCIAVLGSLVWVHHMYTTGLEVDTRAYFTSTTILI 317
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 92.7 bits (220), Expect = 7e-18
Identities = 50/83 (60%), Positives = 53/83 (63%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIFSLHLAGISS SFDQ+PLF+ AVGITA
Sbjct: 115 SVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPV 174
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
AGAIT+LLTDRNLNTSFFDPAG
Sbjct: 175 LAGAITMLLTDRNLNTSFFDPAG 197
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILI 322
GDPILYQHLF FFGHPEVYILI
Sbjct: 199 GDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/84 (52%), Positives = 54/84 (64%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S +K F F
Sbjct: 269 GDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPVFGYLGMAYAMVAIGVVGF 327
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+V AHH+FT G+ ++ + YFT+AT
Sbjct: 328 VVWAHHMFTTGMSVNVKMYFTAAT 351
Score = 62.5 bits (145), Expect = 9e-09
Identities = 34/83 (40%), Positives = 45/83 (54%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
+VD+AI SLH+AG SS + ++PLFV +V +TAF
Sbjct: 185 AVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPV 244
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
A AIT+LLTDRN T+F+D AG
Sbjct: 245 LAAAITMLLTDRNFGTTFYDAAG 267
Score = 34.3 bits (75), Expect = 2.7
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINY 582
F + ++IAVPTGIKIF +ATI G I++
Sbjct: 347 FTAATMVIAVPTGIKIFSWIATIWGGSISF 376
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 92.3 bits (219), Expect = 1e-17
Identities = 45/78 (57%), Positives = 53/78 (67%)
Frame = +2
Query: 305 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 484
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 485 RAYFTSAT*LLLYQQELK 538
RAYFTSAT ++ +K
Sbjct: 215 RAYFTSATMIIAVPTGIK 232
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINYNP 588
F + +IIAVPTGIK+F LAT HGTQI Y+P
Sbjct: 218 FTSATMIIAVPTGIKVFSWLATFHGTQILYSP 249
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/84 (50%), Positives = 55/84 (65%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F F
Sbjct: 244 GDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGF 302
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
V +HH+FTVG+D D+RAYF+ A+
Sbjct: 303 CVWSHHMFTVGLDADSRAYFSGAS 326
Score = 59.7 bits (138), Expect = 6e-08
Identities = 33/83 (39%), Positives = 44/83 (53%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 160 SIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPV 219
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
A +T+LL DRN NTSFF +G
Sbjct: 220 LAAGLTMLLMDRNFNTSFFVVSG 242
Score = 33.5 bits (73), Expect = 4.7
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +1
Query: 496 YFS--YLIIAVPTGIKIFR*LATIHGTQINY 582
YFS LIIA+PTG KIF LATI+G + +
Sbjct: 321 YFSGASLIIAIPTGSKIFSWLATIYGGTLRW 351
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 88.6 bits (210), Expect = 1e-16
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++ KK F F
Sbjct: 332 GDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYLPMVYALVAIGGLGF 390
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+V AHH++TVG+ + +AYF AT
Sbjct: 391 VVWAHHMYTVGMTLTQQAYFMVAT 414
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/84 (40%), Positives = 47/84 (55%)
Frame = +3
Query: 3 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 182
R+VD AIF++H++G SS + ++PLF +V +TA+
Sbjct: 247 RAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLP 306
Query: 183 XXAGAITILLTDRNLNTSFFDPAG 254
AGAIT+LLTDRN T+FFDPAG
Sbjct: 307 VLAGAITMLLTDRNFGTTFFDPAG 330
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 88.2 bits (209), Expect = 2e-16
Identities = 43/94 (45%), Positives = 59/94 (62%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP+LYQHLF FFGHPEVY++ILP FG+ S I++ K+ F +
Sbjct: 236 GDPVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGY 294
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
V AHH+FTVG+DID+R+YF+ AT ++ +K
Sbjct: 295 FVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVK 328
Score = 35.9 bits (79), Expect = 0.88
Identities = 20/84 (23%), Positives = 39/84 (46%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
++DL++ +H+ GISS +F + ++ ++ +T+
Sbjct: 154 NIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSLPI 213
Query: 186 XAGAITILLTDRNLNTSFFDPAGE 257
AIT LL DRN+N++ +D G+
Sbjct: 214 LGVAITGLLLDRNINSTIYDVIGD 237
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 85.8 bits (203), Expect = 8e-16
Identities = 41/97 (42%), Positives = 55/97 (56%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G+P+LYQHLF FFGHPEVY++ILP FGIIS + K F
Sbjct: 236 GNPLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGT 295
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELKFLD 547
V HH++T G+DIDTR YF++AT ++ +K +
Sbjct: 296 SVWGHHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFN 332
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/80 (32%), Positives = 35/80 (43%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
S+D I LH GI S + DQ+ +FV +T+F
Sbjct: 152 SLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPV 211
Query: 186 XAGAITILLTDRNLNTSFFD 245
AG++ LL DRN NTSF+D
Sbjct: 212 LAGSLLFLLLDRNFNTSFYD 231
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/84 (47%), Positives = 48/84 (57%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPIL+QHLF FFGHPEVY+LILPGFGI+SHI +F
Sbjct: 316 GDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYYGLICAMASIVCLGS 375
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+V HH+F VG D T +F+S T
Sbjct: 376 VVWGHHMFMVGFDSLTGVFFSSIT 399
Score = 40.3 bits (90), Expect = 0.041
Identities = 28/82 (34%), Positives = 36/82 (43%)
Frame = +3
Query: 9 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 188
VD +FSLHLAG+SS S + V A T+
Sbjct: 238 VDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLFTSVLLLLSLPVL 292
Query: 189 AGAITILLTDRNLNTSFFDPAG 254
A IT+LL DRN T+FF+P+G
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSG 314
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 82.6 bits (195), Expect = 8e-15
Identities = 42/94 (44%), Positives = 55/94 (58%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP+LYQHLF FFGHPEVY++ILP FG+ S I Q
Sbjct: 210 GDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI-QLSSLHRIPGELSLVLAMASIALIGS 268
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
+V AHH++T G+DIDTR+YFT+AT ++ +K
Sbjct: 269 VVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIK 302
Score = 37.9 bits (84), Expect = 0.22
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SV+ ++FSLHLAGI+S + L LF ++ + +
Sbjct: 128 SVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPV 185
Query: 186 XAGAITILLTDRNLNTSFFD 245
A IT++LTD++L T F+D
Sbjct: 186 LAVGITLILTDKHLGTCFYD 205
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F F
Sbjct: 244 GDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGF 302
Query: 437 IV*AHHIFTVGIDIDTR 487
V +HH+FTVG+D D R
Sbjct: 303 CVWSHHMFTVGLDADKR 319
Score = 59.7 bits (138), Expect = 6e-08
Identities = 33/83 (39%), Positives = 44/83 (53%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 160 SIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPV 219
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
A +T+LL DRN NTSFF +G
Sbjct: 220 LAAGLTMLLMDRNFNTSFFVVSG 242
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 80.2 bits (189), Expect = 4e-14
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 385
GDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 227 GDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 269
Score = 73.7 bits (173), Expect = 4e-12
Identities = 44/83 (53%), Positives = 47/83 (56%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIFSLHLAGISS S Q PLFV +V ITA
Sbjct: 143 SVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPV 202
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
A IT+LLTDRNLNT+FFDPAG
Sbjct: 203 LAAGITMLLTDRNLNTTFFDPAG 225
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 78.6 bits (185), Expect = 1e-13
Identities = 44/83 (53%), Positives = 52/83 (62%)
Frame = -1
Query: 253 PAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXX 74
PAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 11 PAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVM 70
Query: 73 XXXXXXIDEIPAKCSEKIARSTD 5
I+E PAKC+EKI STD
Sbjct: 71 KFTAPKIEETPAKCNEKIPMSTD 93
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 77.8 bits (183), Expect = 2e-13
Identities = 39/87 (44%), Positives = 53/87 (60%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GD IL+QH+F FFGHPEVYI++LP FG+IS I+ + G + F
Sbjct: 229 GDLILFQHIFWFFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGM 287
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LL 517
V AHH+F VG+D+D+RAYF + L+
Sbjct: 288 FVWAHHMFVVGMDVDSRAYFGGVSILI 314
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/81 (35%), Positives = 37/81 (45%)
Frame = +3
Query: 12 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 191
D +F++HL GISS SF LF+ A ITA A
Sbjct: 147 DFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLA 206
Query: 192 GAITILLTDRNLNTSFFDPAG 254
G +T++L DRN NTSF+D G
Sbjct: 207 GGVTLILCDRNFNTSFYDVVG 227
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 77.4 bits (182), Expect = 3e-13
Identities = 42/83 (50%), Positives = 49/83 (59%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 142 SVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPV 201
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
AGAIT+LLTDRN NTSF+DPAG
Sbjct: 202 LAGAITMLLTDRNFNTSFYDPAG 224
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 76.2 bits (179), Expect = 7e-13
Identities = 42/83 (50%), Positives = 49/83 (59%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIFSLH+AG+ S + ++PLFV AV ITA
Sbjct: 61 SVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPV 120
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
AGAIT+LLTDRN+NTSFFDPAG
Sbjct: 121 LAGAITMLLTDRNINTSFFDPAG 143
Score = 33.1 bits (72), Expect = 6.2
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2
Query: 257 GDPILYQHLF*FFGH 301
GDPILYQHLF F GH
Sbjct: 145 GDPILYQHLFWFXGH 159
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/83 (50%), Positives = 47/83 (56%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIFSLHLAG+SS + + LFV +V ITA
Sbjct: 125 SVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPV 184
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
AGAIT+LLTDRN NTSFFDPAG
Sbjct: 185 LAGAITMLLTDRNFNTSFFDPAG 207
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/84 (45%), Positives = 49/84 (58%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+K F F
Sbjct: 280 GDPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK-LFGFKFVVYSTLAIGVLSF 338
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
V AHH+FT GID R+ F + +
Sbjct: 339 GVWAHHMFTTGIDPRIRSSFMAVS 362
Score = 33.1 bits (72), Expect = 6.2
Identities = 21/89 (23%), Positives = 35/89 (39%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
+VD+ + LHL G+S+ + L +F + +
Sbjct: 197 AVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILFAFPL 256
Query: 186 XAGAITILLTDRNLNTSFFDPAGEETQFY 272
A+ +LL DRN T+FF AG + F+
Sbjct: 257 FGSALIMLLLDRNFGTTFFTVAGGDPIFW 285
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.7 bits (173), Expect = 4e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +1
Query: 277 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 447
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 72.5 bits (170), Expect = 8e-12
Identities = 39/97 (40%), Positives = 53/97 (54%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GD +L+QHLF FFGHPEVYILILP GIIS ++ +K F F
Sbjct: 244 GDAVLWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIFGYAFVAYSGVAIGFLGF 302
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELKFLD 547
+V AHH+F VG+ A+F +A+ L+ +K +
Sbjct: 303 LVWAHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFN 339
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 72.5 bits (170), Expect = 8e-12
Identities = 40/83 (48%), Positives = 48/83 (57%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVD+AIFSLHLAG+SS + ++PLFV +V ITA
Sbjct: 143 SVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPV 202
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
AGAIT+LLTDR NT+FFDPAG
Sbjct: 203 LAGAITMLLTDRYFNTTFFDPAG 225
Score = 41.9 bits (94), Expect = 0.013
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +2
Query: 434 FIV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
FIV A H++ VG+D+DTRAYFT+AT ++ +K
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIK 284
Score = 33.9 bits (74), Expect = 3.5
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQIN 579
F + +IIAVPTGIKIF LAT+ G+ N
Sbjct: 270 FTAATMIIAVPTGIKIFSWLATVSGSGRN 298
Score = 32.7 bits (71), Expect = 8.2
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2
Query: 257 GDPILYQHLF*FFG 298
GDPILYQHLF FFG
Sbjct: 227 GDPILYQHLFWFFG 240
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 70.5 bits (165), Expect = 3e-11
Identities = 39/129 (30%), Positives = 61/129 (47%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPIL QHLF FFGHPEVY+LI+P FG I+ I+ ++ +
Sbjct: 387 GDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTRR-VASKHHMIWAIYVMAYMGY 445
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELKFLDD*LQYMEXXXXXXXXXXXXXRFC 616
+V HH++ VG+D +R +++ T ++ +K ++ L + F
Sbjct: 446 LVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFL 505
Query: 617 IFIPVGGFT 643
+ V GFT
Sbjct: 506 LLFLVAGFT 514
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 69.3 bits (162), Expect = 8e-11
Identities = 42/81 (51%), Positives = 44/81 (54%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDL IFSLHLAGISS S Q PLFV AV ITA
Sbjct: 131 SVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPV 190
Query: 186 XAGAITILLTDRNLNTSFFDP 248
A IT+LLTDRNLNT+FFDP
Sbjct: 191 LAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 69.3 bits (162), Expect = 8e-11
Identities = 37/94 (39%), Positives = 49/94 (52%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP++YQHLF F+ HP VYI+ILP FG+IS +I +K F
Sbjct: 237 GDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI-PVHARKPIFGYRAIAYSSLAISFLGL 295
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
IV AHH+FT G R +F + T L+ +K
Sbjct: 296 IVWAHHMFTSGTPGWLRMFFMATTMLIAVPTGIK 329
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/84 (42%), Positives = 48/84 (57%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G++ F F
Sbjct: 311 GGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFKFVVYSTLAIGVLSF 369
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
V AHH+F G+D RA F + +
Sbjct: 370 GVWAHHMFATGLDPRLRASFMAVS 393
Score = 34.3 bits (75), Expect = 2.7
Identities = 25/83 (30%), Positives = 34/83 (40%)
Frame = +3
Query: 9 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 188
VDL + LHL+G+S+ S+ L +F + +
Sbjct: 230 VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGLILFAFPLL 289
Query: 189 AGAITILLTDRNLNTSFFDPAGE 257
AI +LL DRN TSFF AGE
Sbjct: 290 GSAIMMLLFDRNFGTSFF--AGE 310
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/94 (37%), Positives = 50/94 (53%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G P+L+QHLF FFGHPEVYI+ LP FGI+S +IS +K F F
Sbjct: 266 GSPLLFQHLFWFFGHPEVYIVALPAFGIVSDLIS-THARKNIFGYRMMVWAIVAIGALSF 324
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
+V AHH++ G+ +F + T ++ +K
Sbjct: 325 VVWAHHMYVSGMYPYFGFFFATTTLIIAIPTAIK 358
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 373
GDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 252 GDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 44.0 bits (99), Expect = 0.003
Identities = 31/83 (37%), Positives = 39/83 (46%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIF+LHL+G+SS +L LF A +
Sbjct: 175 SVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFGWATWSSRSRYFL---- 230
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
IT++LTDRN NTSFF+ AG
Sbjct: 231 ---GITMVLTDRNFNTSFFEVAG 250
Score = 42.3 bits (95), Expect = 0.010
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +2
Query: 449 HHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
HH++TVG+D+DTRAYFT+AT ++ +K
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIK 378
Score = 37.1 bits (82), Expect = 0.38
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 409 YTSNWVIRIYCLSSSYIHCRYRY*YTSIFYFSY--LIIAVPTGIKIFR*LATIHGTQINY 582
Y WV R Y L+ + + YF+ LIIAVPTGIKIF LAT +G I
Sbjct: 334 YNFVWVNRKYLLTILHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKM 393
Query: 583 NP 588
P
Sbjct: 394 TP 395
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +2
Query: 233 IIF*SCWRGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 358
+ F S GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 224 MFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
Score = 39.9 bits (89), Expect = 0.054
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +1
Query: 418 NWVIRIYCLSSSYIHCRYRY*YTSIFYFSYLIIAVPTGIKIFR*LATI 561
N +R++ L +SY+H R+ Y+ F ++IA+PTG KIF + T+
Sbjct: 285 NSFVRLFGLGTSYVHIRFGSRYSRYFTTVTILIALPTGNKIFNWVTTL 332
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/84 (39%), Positives = 43/84 (51%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP L+QH+F FFGHPEVYIL+LP G++S +I Q ++ + F
Sbjct: 236 GDPRLFQHIFWFFGHPEVYILVLPAMGLVSEVI-QRMARRRAYGYTAIAISSVAIASISF 294
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
V HH+FT D R AT
Sbjct: 295 AVWMHHMFTAVQDFAPRVAMAIAT 318
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 508 LIIAVPTGIKIFR*LATIHGTQINYN-PNYFMKD*VLYF 621
+ +A+P+G+K+F +AT++G +I P FM +L+F
Sbjct: 319 MAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFF 357
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 66.1 bits (154), Expect = 7e-10
Identities = 43/140 (30%), Positives = 60/140 (42%)
Frame = +2
Query: 224 LKYIIF*SCWRGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXX 403
L + IF + G+P++Y +LF +GHPEVYILILP FG+ S + S GK+ F
Sbjct: 259 LDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-LFGHHSMI 317
Query: 404 XXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELKFLDD*LQYMEXXXXX 583
F V HH FT+G +F AT L+ +K + +
Sbjct: 318 YASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRF 377
Query: 584 XXXXXXXXRFCIFIPVGGFT 643
F I +GG T
Sbjct: 378 TAPIMWTLGFMITFSIGGMT 397
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 65.7 bits (153), Expect = 9e-10
Identities = 34/84 (40%), Positives = 44/84 (52%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G+ ++++HLF FGHPEVYILILP FGI S +I +K F F
Sbjct: 235 GNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI-PVFARKRLFGYSSMVFAIVLIGFLGF 293
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+V HH+FT G+ A F AT
Sbjct: 294 MVWVHHMFTTGLGPIANAIFAVAT 317
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 487 SIFYFSYLIIAVPTGIKIFR*LATIHGTQINY 582
+IF + + IA+PTGIKIF L TI G + Y
Sbjct: 311 AIFAVATMAIAIPTGIKIFNWLLTIWGGNVKY 342
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/73 (42%), Positives = 38/73 (52%)
Frame = +2
Query: 290 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 469
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 470 IDIDTRAYFTSAT 508
D+ T +F+S T
Sbjct: 61 YDVHTAVFFSSVT 73
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/84 (39%), Positives = 46/84 (54%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G+ ++Y +LF +GHPEVYIL+LP FGI S ++S GK+ F F
Sbjct: 271 GNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGF 329
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+V HH FT+G + A+F AT
Sbjct: 330 MVWLHHFFTMGSGANVNAFFGIAT 353
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G + YQHLF FGHPEVYILILP GIIS +I +K F F
Sbjct: 246 GSVVFYQHLFWTFGHPEVYILILPAMGIISEVI-PVHARKMLFGYSVMVFSTALIGFMGF 304
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
V +HH+FTVG+ + F+ T
Sbjct: 305 TVWSHHMFTVGMGPVVNSIFSLTT 328
Score = 36.7 bits (81), Expect = 0.50
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 487 SIFYFSYLIIAVPTGIKIFR*LATIHGTQINY 582
SIF + + IAVPTG+KIF L+T+ G QI +
Sbjct: 322 SIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRF 353
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/73 (41%), Positives = 41/73 (56%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G P+L+QHLF F GHPEVYI+++P GI S +I+ +K F F
Sbjct: 288 GSPVLFQHLFWFLGHPEVYIVLIPALGITSEVIA-TNARKPIFGYKAMIGSILGIAVLSF 346
Query: 437 IV*AHHIFTVGID 475
IV AHH+F G++
Sbjct: 347 IVWAHHMFVTGMN 359
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/84 (39%), Positives = 45/84 (53%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G P+L+ +LF +GHPEVYI+ILP FGI S IIS +K+ F F
Sbjct: 266 GMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYKAMVGSIIAISVLSF 324
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+V HH FT+G ++F+ T
Sbjct: 325 LVWTHHFFTMGNSASVNSFFSITT 348
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/87 (36%), Positives = 46/87 (52%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G +L+ HLF FFGHPEVYIL+ P G ++ +IS G K + F
Sbjct: 234 GGALLWDHLFWFFGHPEVYILLFPALGAMADVISTFSG-KPIYAKRYILTAFLIATIISF 292
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LL 517
+V HH+F G +I TR +++ T L+
Sbjct: 293 VVWMHHMFITGTNIYTRLFYSITTILI 319
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 62.9 bits (146), Expect = 7e-09
Identities = 34/94 (36%), Positives = 48/94 (51%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G +L+QH F FGHPEVYILILPGFG+IS +I +K + +
Sbjct: 245 GSAVLWQHYFWIFGHPEVYILILPGFGMISEVI-PVFSRKPIYGYTFVAASSVAIVLLGY 303
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
V AHH+F VG+ + +F + L+ +K
Sbjct: 304 GVWAHHMFAVGLGMYADIFFAVGSLLIAIPTGIK 337
Score = 37.1 bits (82), Expect = 0.38
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 481 YTSIFY-FSYLIIAVPTGIKIFR*LATIHGTQINYN 585
Y IF+ L+IA+PTGIK+F AT+ G +I +N
Sbjct: 318 YADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFN 353
Score = 33.1 bits (72), Expect = 6.2
Identities = 23/82 (28%), Positives = 33/82 (40%)
Frame = +3
Query: 3 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 182
+ VD I L + GI S S ++PLFV + + A
Sbjct: 160 QGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALP 219
Query: 183 XXAGAITILLTDRNLNTSFFDP 248
A+ +LL DR L ++FFDP
Sbjct: 220 ALNSALAMLLIDRWLGSAFFDP 241
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 62.5 bits (145), Expect = 9e-09
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPIL+QHLF FFGHPEVYI+ +P G++S II ++ F F
Sbjct: 248 GDPILWQHLFWFFGHPEVYIIFIPALGMVSSIIITFT-QRPIFGYIPIVLSIVAIGFIGF 306
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+ HH+FT G+ +FT+++
Sbjct: 307 GLWVHHMFTAGLPQLGSNFFTASS 330
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/83 (42%), Positives = 44/83 (53%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 143 SVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPV 202
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
+ IT+LL DRN NTSFF+ +G
Sbjct: 203 LSAGITMLLLDRNFNTSFFEVSG 225
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILIL 325
GDPILY+HLF FFG I++L
Sbjct: 227 GDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP+L+QHLF FFGHPEVYI+ LP G++S I+ + F
Sbjct: 252 GDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV-PTMARHPLVGYRLIVVALIGTGFFSF 310
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+ HH+FT GI + +F++A+
Sbjct: 311 GLWVHHMFTTGIPSLSLGFFSAAS 334
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP+L+QHLF FGHPEVYI+ LP G+++ ++ G K F F
Sbjct: 268 GDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPLFGYGFAVAAVVTMSFLSF 326
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+ AHH+F G+ I + + F++A+
Sbjct: 327 GLWAHHMFATGLPILSLSLFSAAS 350
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 60.5 bits (140), Expect = 4e-08
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP+L+QHLF FFGHPEVYI+ LP G++S I+ + F
Sbjct: 311 GDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV-PTMARTPLVGYRFVVLALVGTAFLSF 369
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+ HH+FT GI + ++F +A+
Sbjct: 370 GLWVHHMFTTGIPQLSLSFFQAAS 393
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP+L+QHLF F+ HP VYI++LP FG++S +++ +K F F
Sbjct: 252 GDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLGIAFVGF 310
Query: 437 IV*AHHIFTVG 469
HH+F G
Sbjct: 311 FAWGHHMFVSG 321
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 60.1 bits (139), Expect = 5e-08
Identities = 34/83 (40%), Positives = 43/83 (51%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIF+LH+ ISS + +LPLFV A+ ITA
Sbjct: 143 SVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPV 202
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
+ +T+LL DRN NTSFF+ AG
Sbjct: 203 LSAGVTMLLLDRNFNTSFFEVAG 225
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 59.7 bits (138), Expect = 6e-08
Identities = 33/83 (39%), Positives = 44/83 (53%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 160 SIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPV 219
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
A +T+LL DRN NTSFF +G
Sbjct: 220 LAAGLTMLLMDRNFNTSFFVVSG 242
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 59.7 bits (138), Expect = 6e-08
Identities = 33/83 (39%), Positives = 44/83 (53%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 160 SIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPV 219
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
A +T+LL DRN NTSFF +G
Sbjct: 220 LAAGLTMLLMDRNFNTSFFVVSG 242
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 59.3 bits (137), Expect = 8e-08
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GD +L+QHLF FFGHPEVYI+ LP G++S I++ ++ F F
Sbjct: 242 GDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAF 300
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+ HH+F G+ ++FT+++
Sbjct: 301 GLWVHHMFVAGLPRLGESFFTASS 324
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 111 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 251
S D++PLFV ++ +T+F A T L+ DR + T FF+PA
Sbjct: 193 SLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPA 239
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G +L+QHLF FFGHPEVYI ILP GI+SHI+ ++ +
Sbjct: 274 GSALLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIGFLSY 332
Query: 437 IV*AHHIFTVGID 475
+V HH+F G++
Sbjct: 333 VVWGHHMFVSGMN 345
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 59.3 bits (137), Expect = 8e-08
Identities = 36/97 (37%), Positives = 48/97 (49%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G +L+QHLF FFGHPEVY+L LP FGI+S II +K F
Sbjct: 251 GGSLLWQHLFWFFGHPEVYVLALPFFGIVSEII-PVFSRKPMFGYVGLIFATLSIGALSM 309
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELKFLD 547
V AHH+F G + +F+ T L+ +KF +
Sbjct: 310 AVWAHHMFVTGAVL--LPFFSFMTFLISVPTGVKFFN 344
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 58.8 bits (136), Expect = 1e-07
Identities = 40/133 (30%), Positives = 57/133 (42%)
Frame = +2
Query: 245 SCWRGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXX 424
S + G +LY +L +GHPEVYILILP FGI S IIS K F
Sbjct: 261 SFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVFSYISLIYATISIT 319
Query: 425 XXXFIV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELKFLDD*LQYMEXXXXXXXXXXXX 604
F+V HH FT+G + +F+ +T ++ +K + +
Sbjct: 320 VLSFLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWF 379
Query: 605 XRFCIFIPVGGFT 643
F I +GGF+
Sbjct: 380 ISFIIIFSIGGFS 392
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/94 (34%), Positives = 47/94 (50%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G P+L+QHLF F+ HP VYI+ILP G++S I++ +K F F
Sbjct: 275 GQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAGLGF 333
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
IV HH+F G++ F AT ++ +K
Sbjct: 334 IVWGHHMFVSGMNPGLGMTFMVATMMIALPSAVK 367
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +2
Query: 308 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 487
VY++ILP FG++SH + + G + + V AHH+FTVG+D+DTR
Sbjct: 1 VYVIILPVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTR 59
Query: 488 AYFTSAT*LLLYQQELK 538
YF+SAT L+ +K
Sbjct: 60 VYFSSATLLIALPTSIK 76
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/87 (36%), Positives = 41/87 (47%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP+L+QH F F+ HP VY+L+LP FGI S + +K F
Sbjct: 252 GDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYARKPLFGYRFVAIASFGITFLSL 310
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LL 517
IV AHH+F G R F T L+
Sbjct: 311 IVWAHHMFYTGTPNWMRHIFMFTTMLI 337
Score = 33.5 bits (73), Expect = 4.7
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 490 IFYFSYLIIAVPTGIKIFR*LATIHGTQINYN 585
IF F+ ++IA+PTG+K+F L T+ + N
Sbjct: 329 IFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLN 360
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 57.6 bits (133), Expect = 3e-07
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 358
GDPIL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 264 GDPILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/94 (32%), Positives = 48/94 (51%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G P+L+QHLF F+ HP VYI++LP G++S ++S +K F F
Sbjct: 278 GQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASLGF 336
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELK 538
IV HH+FT G++ F +T ++ +K
Sbjct: 337 IVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIK 370
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 56.4 bits (130), Expect = 6e-07
Identities = 30/97 (30%), Positives = 46/97 (47%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP++YQ++F F+ HP VY+ +LP FG S II ++ F F
Sbjct: 182 GDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII-PVFARRPLFGYTSMVFAVWAITAVSF 240
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELKFLD 547
+ HH+F G+ TR F+ T L+ +K +
Sbjct: 241 FLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFN 277
Score = 37.9 bits (84), Expect = 0.22
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 15 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 194
L +F +HL G SS +F + LFV + AG
Sbjct: 101 LYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAG 160
Query: 195 AITILLTDRNLNTSFFDPA-GEETQFYINI 281
A+T+L D+ L T+FF+PA G + Y NI
Sbjct: 161 AVTMLFLDKYLGTNFFNPAKGGDPLIYQNI 190
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +1
Query: 490 IFYFSYLIIAVPTGIKIFR*LATIHGTQINY 582
+F ++ L+IAVPTGIKIF + T++ I++
Sbjct: 259 LFSYTTLLIAVPTGIKIFNWMLTLYRGAIHF 289
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 56.4 bits (130), Expect = 6e-07
Identities = 33/87 (37%), Positives = 44/87 (50%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GD +L+QHLF FGHPEVYI+ LP G IS I+ + E F
Sbjct: 242 GDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTELIGYRWVVAAAISLAVLSF 300
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LL 517
+ HH+FT GI A F++A+ L+
Sbjct: 301 GLWVHHMFTTGIPHMGLALFSAASTLV 327
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 56.4 bits (130), Expect = 6e-07
Identities = 35/97 (36%), Positives = 46/97 (47%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G+ + + ++F FGHPEVYILILP FG+ S I S G K F F
Sbjct: 290 GNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLFGYKSLVWATISIAFLSF 348
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LLLYQQELKFLD 547
+V HH FT+G A F A+ L+ +K D
Sbjct: 349 LVWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIYD 385
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 56.4 bits (130), Expect = 6e-07
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +2
Query: 239 F*SCWRGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 418
F S G P+L+Q LF FFGHPEVYILILP G++S ++ + ++E F
Sbjct: 218 FDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIFGYTAIALSSIA 276
Query: 419 XXXXXFI-V*AHHIFTVGIDIDTRAYFTSAT 508
+ V HH+FT ID +SAT
Sbjct: 277 IAFLSALGVWMHHMFT-AIDNTLVQIVSSAT 306
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 56.0 bits (129), Expect = 8e-07
Identities = 25/71 (35%), Positives = 35/71 (49%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP+L+QH F F+ HP VYI++LP +IS ++ +K F F
Sbjct: 245 GDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSLGIAFVGF 303
Query: 437 IV*AHHIFTVG 469
HH+FT G
Sbjct: 304 FTWGHHMFTSG 314
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 56.0 bits (129), Expect = 8e-07
Identities = 32/72 (44%), Positives = 39/72 (54%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVD+AIFSLHLAG+SS + D++PLF+ AV IT
Sbjct: 83 SVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFITTVLLLLSLPV 142
Query: 186 XAGAITILLTDR 221
AGAIT+LLTDR
Sbjct: 143 LAGAITMLLTDR 154
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 56.0 bits (129), Expect = 8e-07
Identities = 32/83 (38%), Positives = 41/83 (49%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
+VDLAIFSLHL+G SS ++ +PLF AV TA
Sbjct: 148 AVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPV 207
Query: 186 XAGAITILLTDRNLNTSFFDPAG 254
A +T+ + DRN NTSFF+ AG
Sbjct: 208 LAAGLTMGIFDRNFNTSFFEYAG 230
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILIL 325
GD +LYQHLF ++ HPEV I+ L
Sbjct: 232 GDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/87 (36%), Positives = 44/87 (50%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GD +L+QHLF FGHPEVYI+ LP G IS I+ + F
Sbjct: 242 GDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTGLLGYGWIVAAAVALGVLSF 300
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LL 517
+ HH+FT GI A+F++A+ L+
Sbjct: 301 GLWVHHMFTTGIPHLGLAFFSAASTLV 327
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP+L+Q F F+ HP VY+++LP GI++ + S +K F
Sbjct: 236 GDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFARKPLFGYRQMVWAQMGIVVLGT 294
Query: 437 IV*AHHIFTVG 469
+V AHH+FTVG
Sbjct: 295 MVWAHHMFTVG 305
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/87 (35%), Positives = 44/87 (50%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G+ +LY +LF +GHPEVY ++LP FG IS II +K F +
Sbjct: 289 GNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII-PTFAEKPLFGYATMVIATFAIGGISW 347
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LL 517
V HH FT+G +F++AT L+
Sbjct: 348 GVWLHHFFTMGAGPGINIFFSTATMLV 374
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/84 (30%), Positives = 40/84 (47%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G +L+ HLF FFGHPEVYI+ P G+++ G++ F
Sbjct: 248 GASLLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSF 306
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+V HH+F GI++ + F + T
Sbjct: 307 VVWMHHMFLTGINLPIKTIFMATT 330
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/84 (32%), Positives = 43/84 (51%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDP+L+QHLF FGHPEVYI+ LP + + I+ ++ F
Sbjct: 268 GDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV-PTAARQPIVGYSWIVLSAVGTGFLSF 326
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
+ HH+FT G+ + +F++A+
Sbjct: 327 GLWVHHMFTTGLPALSLGFFSAAS 350
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 52.4 bits (120), Expect = 9e-06
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = +1
Query: 277 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSY 456
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 457 IHCRYRY*YTSIFY 498
+H R +TSI Y
Sbjct: 61 VHSRNGRSHTSILY 74
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 52.4 bits (120), Expect = 9e-06
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
GDPI Y HLF F HPEVY+L++P G++ ++ + +K + F
Sbjct: 228 GDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPR-FSRKPIYSYNSGLFAFVLLTIVGF 286
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT 508
AHH+F G+ + F T
Sbjct: 287 SSWAHHMFATGMSFTEKTVFMLGT 310
Score = 32.7 bits (71), Expect = 8.2
Identities = 23/82 (28%), Positives = 34/82 (41%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
+ D+ IF L + GISS S Q+PL + ++
Sbjct: 144 AADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVALPT 203
Query: 186 XAGAITILLTDRNLNTSFFDPA 251
A A+ +LLTDR + FF+PA
Sbjct: 204 FAAALLMLLTDRLGVSGFFNPA 225
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINYNPN 591
F + +IIAVPTGIKIF LAT+HGTQINY+P+
Sbjct: 9 FTSATMIIAVPTGIKIFSWLATLHGTQINYSPS 41
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINYNPN 591
F + +IIAVPTGIKIF LAT+HGTQINY P+
Sbjct: 8 FTSATMIIAVPTGIKIFSWLATLHGTQINYTPS 40
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 49.6 bits (113), Expect = 7e-05
Identities = 26/72 (36%), Positives = 35/72 (48%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G P+LYQ F F+ HP VY+++LP GI + + S +K F
Sbjct: 244 GVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVMVYSMLAIVLVSC 302
Query: 437 IV*AHHIFTVGI 472
IV HH+F VGI
Sbjct: 303 IVWLHHMFAVGI 314
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINYN-PNYFM 600
F S LI+AVPTG+KIF + T+ G +I P Y++
Sbjct: 322 FMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWL 358
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 49.2 bits (112), Expect = 9e-05
Identities = 28/87 (32%), Positives = 42/87 (48%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G P+L+QHLF F HP VY+++LP GI+S + ++ F
Sbjct: 262 GRPLLWQHLFWMFAHPWVYVVVLPAMGIVSDAL-PTFCRRPLVAYEAVAVSTVATMLIGF 320
Query: 437 IV*AHHIFTVGIDIDTRAYFTSAT*LL 517
V HH+F GI A+F +A+ L+
Sbjct: 321 EVWVHHMFATGIAPLALAFFGAASMLI 347
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 137 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 241
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G +++++LF +FGHPEVY+L+LPG G + +S + +
Sbjct: 255 GGALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS-NLNHRPPYLKKWMIAAMGAISVDSV 313
Query: 437 IV*AHHIFTVGI 472
+V HH F GI
Sbjct: 314 MVFLHHTFMTGI 325
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 41.5 bits (93), Expect = 0.018
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +2
Query: 134 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRGDP 265
CM C +Y TCFS S+Y IIN K KY IF W P
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSP 140
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 40.7 bits (91), Expect = 0.031
Identities = 25/63 (39%), Positives = 30/63 (47%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 142 SVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPV 201
Query: 186 XAG 194
AG
Sbjct: 202 LAG 204
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 39.5 bits (88), Expect = 0.071
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 358
GD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 226 GDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 38.3 bits (85), Expect = 0.16
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +2
Query: 290 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 469
FFGHP VY + P FG + + I K+ F ++ HH+ T
Sbjct: 2 FFGHPVVYYVPFPLFGALYYYI-PIYAKRSLFSEKWARWNIFLLAIGSMLIWVHHLQTFP 60
Query: 470 IDIDTRAYFTSAT*LL 517
+ +D RA+ T +T +L
Sbjct: 61 LPVDLRAWITVSTLVL 76
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 37.1 bits (82), Expect = 0.38
Identities = 24/81 (29%), Positives = 30/81 (37%)
Frame = +2
Query: 257 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 436
G P+ Y F F HPEVY+ ILP F I I+ K+ F
Sbjct: 319 GHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL-PAAAKRPLFARGWAIAGLVGVSMSGA 377
Query: 437 IV*AHHIFTVGIDIDTRAYFT 499
+ HH FT D + T
Sbjct: 378 MSGVHHYFTAVSDARMPIFMT 398
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 36.7 bits (81), Expect = 0.50
Identities = 30/81 (37%), Positives = 34/81 (41%)
Frame = +3
Query: 6 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 185
+VDL IF LHLAGISS ++ LF
Sbjct: 132 AVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPV 191
Query: 186 XAGAITILLTDRNLNTSFFDP 248
A AIT+L R N SFF P
Sbjct: 192 LAAAITMLXXXRXXNXSFFXP 212
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 36.3 bits (80), Expect = 0.66
Identities = 26/73 (35%), Positives = 34/73 (46%)
Frame = +3
Query: 15 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 194
L IFSL + S + D++ L ++ ITA AG
Sbjct: 129 LXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSLPVLAG 188
Query: 195 AITILLTDRNLNT 233
AIT+LLTDRN+NT
Sbjct: 189 AITMLLTDRNMNT 201
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 35.9 bits (79), Expect = 0.88
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +3
Query: 117 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGEE 260
DQ+ LF ++ IT AG IT+LL+DRN N FF G E
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGE 59
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 302 PEVYILILPGFGIISHIISQERGKK 376
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 260 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 373
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 34.3 bits (75), Expect = 2.7
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2
Query: 446 AHHIFTVGIDIDTRAYFTSAT 508
AHH+ TVG++ DTRAYF++ T
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMT 22
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 260 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 370
DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 226 DPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 266 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 373
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 33.5 bits (73), Expect = 4.7
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 493 FYFSYLIIAVPTGIKIFR*LATIHGTQINYNP 588
F + +IIA+PTGIK F LAT G I ++P
Sbjct: 306 FTSATMIIAIPTGIKAFSWLATXXGGTIKWDP 337
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 33.5 bits (73), Expect = 4.7
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 449 HHIFTVGIDIDTRAYFTSAT 508
HH+FTVG+D++T +F+S T
Sbjct: 53 HHMFTVGLDVNTAVFFSSVT 72
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 33.5 bits (73), Expect = 4.7
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 455 IFTVGIDIDTRAYFTSAT*LLLYQQELK 538
++ VG+D+DTRAYFT+AT ++ +K
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIK 28
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 220 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 98
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 32.7 bits (71), Expect = 8.2
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 280 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSS 453
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 454 YIH 462
+H
Sbjct: 618 NVH 620
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,246,299
Number of Sequences: 1657284
Number of extensions: 8333731
Number of successful extensions: 19773
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 17900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19549
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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