Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0657
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.6  
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    23   8.6  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    23   8.6  
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    23   8.6  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   8.6  
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    23   8.6  
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    23   8.6  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    23   8.6  
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    23   8.6  
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    23   8.6  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    23   8.6  
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    23   8.6  
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    23   8.6  
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    23   8.6  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 331 TLRIYECYCVTYNIC 287
           T+ I +CYCV+++ C
Sbjct: 809 TICIEKCYCVSFSRC 823


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 77  QPTIIKSVEHHAPANYEFSYSVH 99


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 69  QPTIIKSVEHHAPANYEFSYSVH 91


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 69  QPTIIKSVEHHAPANYEFSYSVH 91


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 69  QPTIIKSVEHHAPANYEFSYSVH 91


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 77  QPTIIKSVEHHAPANYEFSYSVH 99


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 69  QPTIIKSVEHHAPANYEFSYSVH 91


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 77  QPTIIKSVEHHAPANYEFSYSVH 99


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 101 QPTIIKSVEHHAPANYEFSYSVH 123


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 69  QPTIIKSVEHHAPANYEFSYSVH 91


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 77  QPTIIKSVEHHAPANYEFSYSVH 99


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 69  QPTIIKSVEHHAPANYEFSYSVH 91


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 77  QPTIIKSVEHHAPANYEFSYSVH 99


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 517 QPTSVLLSPSHKPNXYSHSFTVH 449
           QPT +     H P  Y  S++VH
Sbjct: 69  QPTIIKSVEHHAPANYEFSYSVH 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,241
Number of Sequences: 2352
Number of extensions: 11867
Number of successful extensions: 83
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)