Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0656
(696 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC122862-1|AAI22863.1| 299|Homo sapiens ubiquinol-cytochrome c ... 63 8e-10
BC119013-1|AAI19014.1| 299|Homo sapiens ubiquinol-cytochrome c ... 63 8e-10
BC105791-1|AAI05792.1| 299|Homo sapiens ubiquinol-cytochrome c ... 63 8e-10
AY050659-1|AAL13118.1| 299|Homo sapiens CBP3 protein. 63 8e-10
AL389874-9|CAI15744.1| 243|Homo sapiens chromosome 20 open read... 63 8e-10
AL389874-7|CAI15739.1| 249|Homo sapiens chromosome 20 open read... 63 8e-10
AL389874-4|CAI15738.1| 299|Homo sapiens chromosome 20 open read... 63 8e-10
AL121752-9|CAI21455.1| 243|Homo sapiens chromosome 20 open read... 63 8e-10
AL121752-7|CAI21450.1| 249|Homo sapiens chromosome 20 open read... 63 8e-10
AL121752-4|CAI21449.1| 299|Homo sapiens chromosome 20 open read... 63 8e-10
AL389874-6|CAI15742.1| 231|Homo sapiens chromosome 20 open read... 62 2e-09
AL121752-6|CAI21454.1| 231|Homo sapiens chromosome 20 open read... 62 2e-09
AK001712-1|BAA91854.1| 299|Homo sapiens protein ( Homo sapiens ... 61 4e-09
AL389874-3|CAI15743.1| 273|Homo sapiens chromosome 20 open read... 52 3e-06
AL389874-1|CAM22187.1| 221|Homo sapiens chromosome 20 open read... 52 3e-06
AL121752-3|CAI21452.1| 273|Homo sapiens chromosome 20 open read... 52 3e-06
AL121752-1|CAM28249.1| 221|Homo sapiens chromosome 20 open read... 52 3e-06
AK022650-1|BAB14156.1| 213|Homo sapiens protein ( Homo sapiens ... 52 3e-06
AB209400-1|BAD92637.1| 213|Homo sapiens basic FGF-repressed Zic... 52 3e-06
AY050660-1|AAL13119.1| 226|Homo sapiens CBP3 short form protein. 51 5e-06
AL389874-5|CAI15740.2| 272|Homo sapiens chromosome 20 open read... 51 5e-06
AL121752-5|CAI21453.2| 272|Homo sapiens chromosome 20 open read... 51 5e-06
AK022742-1|BAB14217.1| 165|Homo sapiens protein ( Homo sapiens ... 50 6e-06
AL389874-8|CAI15741.1| 219|Homo sapiens chromosome 20 open read... 35 0.24
AL121752-8|CAI21451.1| 219|Homo sapiens chromosome 20 open read... 35 0.24
>BC122862-1|AAI22863.1| 299|Homo sapiens ubiquinol-cytochrome c
reductase complex chaperone, CBP3 homolog (yeast)
protein.
Length = 299
Score = 63.3 bits (147), Expect = 8e-10
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 95 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 154
Query: 438 WLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQ 617
W+ +VR E Y+ +++ H + + G NP I KK
Sbjct: 155 WMCLVRMKQEG------RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKN 200
Query: 618 VSELSEQFQAALVAYDEG-LSDDKILA 695
+ ++ F AA++ YDEG LSDD LA
Sbjct: 201 MILMTNHFYAAILGYDEGILSDDHGLA 227
>BC119013-1|AAI19014.1| 299|Homo sapiens ubiquinol-cytochrome c
reductase complex chaperone, CBP3 homolog (yeast)
protein.
Length = 299
Score = 63.3 bits (147), Expect = 8e-10
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 95 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 154
Query: 438 WLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQ 617
W+ +VR E Y+ +++ H + + G NP I KK
Sbjct: 155 WMCLVRMKQEG------RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKN 200
Query: 618 VSELSEQFQAALVAYDEG-LSDDKILA 695
+ ++ F AA++ YDEG LSDD LA
Sbjct: 201 MILMTNHFYAAILGYDEGILSDDHGLA 227
>BC105791-1|AAI05792.1| 299|Homo sapiens ubiquinol-cytochrome c
reductase complex chaperone, CBP3 homolog (yeast)
protein.
Length = 299
Score = 63.3 bits (147), Expect = 8e-10
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 95 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 154
Query: 438 WLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQ 617
W+ +VR E Y+ +++ H + + G NP I KK
Sbjct: 155 WMCLVRMKQEG------RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKN 200
Query: 618 VSELSEQFQAALVAYDEG-LSDDKILA 695
+ ++ F AA++ YDEG LSDD LA
Sbjct: 201 MILMTNHFYAAILGYDEGILSDDHGLA 227
>AY050659-1|AAL13118.1| 299|Homo sapiens CBP3 protein.
Length = 299
Score = 63.3 bits (147), Expect = 8e-10
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 95 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 154
Query: 438 WLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQ 617
W+ +VR E Y+ +++ H + + G NP I KK
Sbjct: 155 WMCLVRMKQEG------RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKN 200
Query: 618 VSELSEQFQAALVAYDEG-LSDDKILA 695
+ ++ F AA++ YDEG LSDD LA
Sbjct: 201 MILMTNHFYAAILGYDEGILSDDHGLA 227
>AL389874-9|CAI15744.1| 243|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 243
Score = 63.3 bits (147), Expect = 8e-10
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 109 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 168
Query: 438 WLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQ 617
W+ +VR E Y+ +++ H + + G NP I KK
Sbjct: 169 WMCLVRMKQEG------RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKN 214
Query: 618 VSELSEQFQAALVAYDEG-LSDDKILA 695
+ ++ F AA++ YDEG LSDD LA
Sbjct: 215 MILMTNHFYAAILGYDEGILSDDHGLA 241
>AL389874-7|CAI15739.1| 249|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 249
Score = 63.3 bits (147), Expect = 8e-10
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 63 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 122
Query: 438 WLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQ 617
W+ +VR E Y+ +++ H + + G NP I KK
Sbjct: 123 WMCLVRMKQEG------RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKN 168
Query: 618 VSELSEQFQAALVAYDEG-LSDDKILA 695
+ ++ F AA++ YDEG LSDD LA
Sbjct: 169 MILMTNHFYAAILGYDEGILSDDHGLA 195
>AL389874-4|CAI15738.1| 299|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 299
Score = 63.3 bits (147), Expect = 8e-10
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 95 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 154
Query: 438 WLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQ 617
W+ +VR E Y+ +++ H + + G NP I KK
Sbjct: 155 WMCLVRMKQEG------RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKN 200
Query: 618 VSELSEQFQAALVAYDEG-LSDDKILA 695
+ ++ F AA++ YDEG LSDD LA
Sbjct: 201 MILMTNHFYAAILGYDEGILSDDHGLA 227
>AL121752-9|CAI21455.1| 243|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 243
Score = 63.3 bits (147), Expect = 8e-10
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 109 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 168
Query: 438 WLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQ 617
W+ +VR E Y+ +++ H + + G NP I KK
Sbjct: 169 WMCLVRMKQEG------RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKN 214
Query: 618 VSELSEQFQAALVAYDEG-LSDDKILA 695
+ ++ F AA++ YDEG LSDD LA
Sbjct: 215 MILMTNHFYAAILGYDEGILSDDHGLA 241
>AL121752-7|CAI21450.1| 249|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 249
Score = 63.3 bits (147), Expect = 8e-10
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 63 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 122
Query: 438 WLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQ 617
W+ +VR E Y+ +++ H + + G NP I KK
Sbjct: 123 WMCLVRMKQEG------RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKN 168
Query: 618 VSELSEQFQAALVAYDEG-LSDDKILA 695
+ ++ F AA++ YDEG LSDD LA
Sbjct: 169 MILMTNHFYAAILGYDEGILSDDHGLA 195
>AL121752-4|CAI21449.1| 299|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 299
Score = 63.3 bits (147), Expect = 8e-10
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 95 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 154
Query: 438 WLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQ 617
W+ +VR E Y+ +++ H + + G NP I KK
Sbjct: 155 WMCLVRMKQEG------RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKN 200
Query: 618 VSELSEQFQAALVAYDEG-LSDDKILA 695
+ ++ F AA++ YDEG LSDD LA
Sbjct: 201 MILMTNHFYAAILGYDEGILSDDHGLA 227
>AL389874-6|CAI15742.1| 231|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 231
Score = 61.7 bits (143), Expect = 2e-09
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = +3
Query: 309 RLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAK 488
++K+ +Y S +EE+F + ++PDT SWF IT LHVW+ +VR E
Sbjct: 44 KIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHVWMCLVRMKQEG------ 97
Query: 489 EKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQVSELSEQFQAALVAYDE 668
Y+ +++ H + + G NP I KK + ++ F AA++ YDE
Sbjct: 98 RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKNMILMTNHFYAAILGYDE 149
Query: 669 G-LSDDKILA 695
G LSDD LA
Sbjct: 150 GILSDDHGLA 159
>AL121752-6|CAI21454.1| 231|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 231
Score = 61.7 bits (143), Expect = 2e-09
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = +3
Query: 309 RLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAK 488
++K+ +Y S +EE+F + ++PDT SWF IT LHVW+ +VR E
Sbjct: 44 KIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHVWMCLVRMKQEG------ 97
Query: 489 EKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQVSELSEQFQAALVAYDE 668
Y+ +++ H + + G NP I KK + ++ F AA++ YDE
Sbjct: 98 RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKNMILMTNHFYAAILGYDE 149
Query: 669 G-LSDDKILA 695
G LSDD LA
Sbjct: 150 GILSDDHGLA 159
>AK001712-1|BAA91854.1| 299|Homo sapiens protein ( Homo sapiens
cDNA FLJ10850 fis, clone NT2RP4001474, weakly similar to
Xenopus laevis putative Zic3 binding protein mRNA. ).
Length = 299
Score = 60.9 bits (141), Expect = 4e-09
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+ + ++PDT SWF IT LHV
Sbjct: 95 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFLLRCQMPDTFNSWFLITLLHV 154
Query: 438 WLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLMFLVGLRLLEGANPSIAKKQ 617
W+ +VR E Y+ +++ H + + G NP I KK
Sbjct: 155 WMCLVRMKQEG------RSGKYMCRIIV--------HFMWEDVQQRGRVMGVNPYILKKN 200
Query: 618 VSELSEQFQAALVAYDEG-LSDDKILA 695
+ ++ F AA++ YDEG LSDD LA
Sbjct: 201 MILMTNHFYAAILGYDEGILSDDHGLA 227
>AL389874-3|CAI15743.1| 273|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 273
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 95 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 154
Query: 438 WLLMVRYMAE 467
W+ +VR E
Sbjct: 155 WMCLVRMKQE 164
>AL389874-1|CAM22187.1| 221|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 221
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 95 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 154
Query: 438 WLLMVRYMAE 467
W+ +VR E
Sbjct: 155 WMCLVRMKQE 164
>AL121752-3|CAI21452.1| 273|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 273
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 95 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 154
Query: 438 WLLMVRYMAE 467
W+ +VR E
Sbjct: 155 WMCLVRMKQE 164
>AL121752-1|CAM28249.1| 221|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 221
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 95 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 154
Query: 438 WLLMVRYMAE 467
W+ +VR E
Sbjct: 155 WMCLVRMKQE 164
>AK022650-1|BAB14156.1| 213|Homo sapiens protein ( Homo sapiens
cDNA FLJ12588 fis, clone NT2RM4001256, weakly similar to
Xenopus laevis putative Zic3 binding protein mRNA. ).
Length = 213
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 95 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 154
Query: 438 WLLMVRYMAE 467
W+ +VR E
Sbjct: 155 WMCLVRMKQE 164
>AB209400-1|BAD92637.1| 213|Homo sapiens basic FGF-repressed Zic
binding protein isoform a variant protein.
Length = 213
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +3
Query: 267 KFMKAVGW---MDQDRTRLKLTGYFLYESIHANIVYEEWFEKLELPDTLASWFSITELHV 437
K ++A+G+ + + ++K+ +Y S +EE+F + ++PDT SWF IT LHV
Sbjct: 87 KIIEAMGFTGPLKYSKWKIKIAALRMYTSCVEKTDFEEFFLRCQMPDTFNSWFLITLLHV 146
Query: 438 WLLMVRYMAE 467
W+ +VR E
Sbjct: 147 WMCLVRMKQE 156
>AY050660-1|AAL13119.1| 226|Homo sapiens CBP3 short form protein.
Length = 226
Score = 50.8 bits (116), Expect = 5e-06
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +3
Query: 381 KLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLM 560
+ ++PDT SWF IT LHVW+ +VR E Y+ +++ H
Sbjct: 63 RCQMPDTFNSWFLITLLHVWMCLVRMKQEG------RSGKYMCRIIV--------HFMWE 108
Query: 561 FLVGLRLLEGANPSIAKKQVSELSEQFQAALVAYDEG-LSDDKILA 695
+ + G NP I KK + ++ F AA++ YDEG LSDD LA
Sbjct: 109 DVQQRGRVMGVNPYILKKNMILMTNHFYAAILGYDEGILSDDHGLA 154
>AL389874-5|CAI15740.2| 272|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 272
Score = 50.8 bits (116), Expect = 5e-06
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +3
Query: 381 KLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLM 560
+ ++PDT SWF IT LHVW+ +VR E Y+ +++ H
Sbjct: 109 RCQMPDTFNSWFLITLLHVWMCLVRMKQEG------RSGKYMCRIIV--------HFMWE 154
Query: 561 FLVGLRLLEGANPSIAKKQVSELSEQFQAALVAYDEG-LSDDKILA 695
+ + G NP I KK + ++ F AA++ YDEG LSDD LA
Sbjct: 155 DVQQRGRVMGVNPYILKKNMILMTNHFYAAILGYDEGILSDDHGLA 200
>AL121752-5|CAI21453.2| 272|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 272
Score = 50.8 bits (116), Expect = 5e-06
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +3
Query: 381 KLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLM 560
+ ++PDT SWF IT LHVW+ +VR E Y+ +++ H
Sbjct: 109 RCQMPDTFNSWFLITLLHVWMCLVRMKQEG------RSGKYMCRIIV--------HFMWE 154
Query: 561 FLVGLRLLEGANPSIAKKQVSELSEQFQAALVAYDEG-LSDDKILA 695
+ + G NP I KK + ++ F AA++ YDEG LSDD LA
Sbjct: 155 DVQQRGRVMGVNPYILKKNMILMTNHFYAAILGYDEGILSDDHGLA 200
>AK022742-1|BAB14217.1| 165|Homo sapiens protein ( Homo sapiens
cDNA FLJ12680 fis, clone NT2RM4002438, weakly similar to
Xenopus laevis putative Zic3 binding protein mRNA. ).
Length = 165
Score = 50.4 bits (115), Expect = 6e-06
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +3
Query: 387 ELPDTLASWFSITELHVWLLMVRYMAEDIAHTAKEKXTYVKXMVILSGIA**KHCGLMFL 566
++PDT SWF IT LHVW+ +VR E Y+ +++ H +
Sbjct: 4 QMPDTFNSWFLITLLHVWMCLVRMKQEG------RSGKYMCRIIV--------HFMWEDV 49
Query: 567 VGLRLLEGANPSIAKKQVSELSEQFQAALVAYDEG-LSDDKILA 695
+ G NP I KK + ++ F AA++ YDEG LSDD LA
Sbjct: 50 QQRGRVMGVNPYILKKNMILMTNHFYAAILGYDEGILSDDHGLA 93
>AL389874-8|CAI15741.1| 219|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 219
Score = 35.1 bits (77), Expect = 0.24
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 573 LRLLEGANPSIAKKQVSELSEQFQAALVAYDEG-LSDDKILA 695
L+ + NP I KK + ++ F AA++ YDEG LSDD LA
Sbjct: 106 LKYSKWVNPYILKKNMILMTNHFYAAILGYDEGILSDDHGLA 147
>AL121752-8|CAI21451.1| 219|Homo sapiens chromosome 20 open reading
frame 44 protein.
Length = 219
Score = 35.1 bits (77), Expect = 0.24
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 573 LRLLEGANPSIAKKQVSELSEQFQAALVAYDEG-LSDDKILA 695
L+ + NP I KK + ++ F AA++ YDEG LSDD LA
Sbjct: 106 LKYSKWVNPYILKKNMILMTNHFYAAILGYDEGILSDDHGLA 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,396,922
Number of Sequences: 237096
Number of extensions: 1767847
Number of successful extensions: 3063
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3063
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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