Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0655
         (691 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IIG7 Cluster: Putative uncharacterized protein; n=5; ...    33   8.7  
UniRef50_Q7QSP1 Cluster: GLP_327_24821_23835; n=1; Giardia lambl...    33   8.7  

>UniRef50_Q8IIG7 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 964

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = +1

Query: 82  ESNLGY--IYINEVCNLIRLFFNYITNEVVINHYFNVTDVI 198
           E +L Y  IY ++V N+I+ F+N I ++++ N+YFN  D I
Sbjct: 849 EEHLKYNNIYKHDV-NIIKNFYNEIKDKIIQNYYFNQDDCI 888


>UniRef50_Q7QSP1 Cluster: GLP_327_24821_23835; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_327_24821_23835 - Giardia lamblia
           ATCC 50803
          Length = 328

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -1

Query: 424 PDVKWLLETSTTQMPPPALVHNIGSQ*LQQLPHPSNR 314
           PD  ++LE+   Q+ PP L+H +G + L  +P  ++R
Sbjct: 150 PDTIYVLESGVAQLGPPPLLHLLGIRQLSDMPTSAHR 186


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,653,541
Number of Sequences: 1657284
Number of extensions: 12338812
Number of successful extensions: 22807
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22802
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)