Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0654
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    23   7.0  
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    23   7.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   7.0  

>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -1

Query: 147 RIISALANVFLLHSYLSCNVNDPHLPHL 64
           R +  LA  FLL S L    + PHL  L
Sbjct: 187 RDVDCLARCFLLRSGLYSEQHGPHLDRL 214


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -1

Query: 147 RIISALANVFLLHSYLSCNVNDPHLPHL 64
           R +  LA  FLL S L    + PHL  L
Sbjct: 187 RDVDCLARCFLLRSGLYSEQHGPHLDRL 214


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 92  LQDRYECSRKTLANAD 139
           L+D Y+ ++KTLAN +
Sbjct: 753 LEDAYQSAKKTLANVE 768


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,723
Number of Sequences: 2352
Number of extensions: 10819
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)