Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0653
(631 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-... 223 4e-57
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L... 40 0.049
UniRef50_Q8YJ82 Cluster: ACETYLTRANSFERASE; n=6; Brucellaceae|Re... 36 0.80
UniRef50_Q8MTP2 Cluster: Bm101; n=1; Bombyx mori|Rep: Bm101 - Bo... 36 1.1
UniRef50_Q75E14 Cluster: ABL141Cp; n=1; Eremothecium gossypii|Re... 35 1.9
UniRef50_Q8WS60 Cluster: Endonuclease/reverse transcriptase; n=6... 34 2.4
UniRef50_UPI0000E49F41 Cluster: PREDICTED: similar to endonuclea... 34 3.2
UniRef50_UPI0000E46784 Cluster: PREDICTED: similar to endonuclea... 34 3.2
UniRef50_UPI0000F1F0B8 Cluster: PREDICTED: hypothetical protein;... 33 4.3
UniRef50_UPI0000E47DE5 Cluster: PREDICTED: similar to endonuclea... 33 4.3
UniRef50_A6GD31 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_UPI0000E4A923 Cluster: PREDICTED: similar to angiotensi... 33 7.5
UniRef50_UPI0000E47148 Cluster: PREDICTED: similar to endonuclea... 32 9.9
UniRef50_Q9TPK4 Cluster: MHC class II antigen; n=9; Gnathostomat... 32 9.9
>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
protein; n=25; Arthropoda|Rep: Endonuclease and reverse
transcriptase-like protein - Bombyx mori (Silk moth)
Length = 986
Score = 223 bits (544), Expect = 4e-57
Identities = 104/125 (83%), Positives = 105/125 (84%)
Frame = -3
Query: 629 GAPKYQLLPLDSIQRRPVRIXDNPHSLGSFGASGFAEGLRSLCILYRMFHGECSEELFEM 450
GAPKYQLLP DSIQRR VRI DNP G SLCILYRMFHGECSEELFEM
Sbjct: 839 GAPKYQLLPFDSIQRRAVRIVDNPGLTDRLEPLGLRRDFGSLCILYRMFHGECSEELFEM 898
Query: 449 IPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYDMSF 270
IP SRFYHRTARHRSRVHPYYLEPLR STVRFQRSFLPRTIRLWNELPS+VFPERYDMSF
Sbjct: 899 IPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSF 958
Query: 269 FKRGL 255
FKRGL
Sbjct: 959 FKRGL 963
>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
hornworm)
Length = 248
Score = 39.9 bits (89), Expect = 0.049
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 197 MGDGNHSPSGGPYARLPT 144
MGDGNHSPSG PYA LPT
Sbjct: 1 MGDGNHSPSGRPYASLPT 18
>UniRef50_Q8YJ82 Cluster: ACETYLTRANSFERASE; n=6; Brucellaceae|Rep:
ACETYLTRANSFERASE - Brucella melitensis
Length = 185
Score = 35.9 bits (79), Expect = 0.80
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = -3
Query: 620 KYQLLPLDSIQRRPVRIXDNPHSLGSFGASGFAEGLRSLC--ILYRMFHGECSEELFEMI 447
+Y+ + L+++QR P+ ++ + FA L + ++ FHGE EL +
Sbjct: 24 RYRAIRLNALQRAPMSFGSTFEEENAYSDTIFARRLEQVDGNAIFGAFHGE---ELLGIA 80
Query: 446 PTSRFYHRTARHRSRVHPYYLEP 378
R RT RHR + Y+EP
Sbjct: 81 GHHRHERRTERHRGTLASVYVEP 103
>UniRef50_Q8MTP2 Cluster: Bm101; n=1; Bombyx mori|Rep: Bm101 -
Bombyx mori (Silk moth)
Length = 92
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2
Query: 398 ELYSGGGRCDGKNEMLVSSRTI 463
E Y GG RCDGKNE +VSS+TI
Sbjct: 4 EFYDGG-RCDGKNETMVSSQTI 24
>UniRef50_Q75E14 Cluster: ABL141Cp; n=1; Eremothecium gossypii|Rep:
ABL141Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 518
Score = 34.7 bits (76), Expect = 1.9
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -1
Query: 550 SDRLEPLGLRRD-FGPSVFYTVCSMGSALRNCSR*YQHLVFTIAPPATGVEFIHTTWSHC 374
+DR +G R F +FY + S G+ L N + +H +++I P GVE
Sbjct: 239 ADRCLYVGTREGAFALPLFYKLDSSGATLVNLLQPGKHQIYSIVPEQAGVEVNKQELYRM 298
Query: 373 GHPQCVSRDLFCHV 332
G C S+ L CHV
Sbjct: 299 GQLLC-SKMLSCHV 311
>UniRef50_Q8WS60 Cluster: Endonuclease/reverse transcriptase; n=6;
Bilateria|Rep: Endonuclease/reverse transcriptase -
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Length = 1045
Score = 34.3 bits (75), Expect = 2.4
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 425 RTARHRSRVHPY-YLEPLRXSTVRFQRSFLPRTIRLWNELPS 303
R R VHP Y+ P +T R Q SF PRTI WN LP+
Sbjct: 986 RQTRLTRNVHPLTYVIPRCRTTYR-QMSFFPRTILEWNSLPA 1026
>UniRef50_UPI0000E49F41 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 835
Score = 33.9 bits (74), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 410 RSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYDMSF 270
R+R H + + T SF P+T + WN LPSSV + +F
Sbjct: 775 RTRGHDHQFQLYHTRTDVHANSFFPKTTKEWNNLPSSVISAKTTSAF 821
>UniRef50_UPI0000E46784 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 576
Score = 33.9 bits (74), Expect = 3.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 398 HPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVF 294
H + +R T ++ +F PRTIR WN L S+F
Sbjct: 401 HNLFFSNIRCKTDIYRLTFFPRTIRAWNLLSPSIF 435
>UniRef50_UPI0000F1F0B8 Cluster: PREDICTED: hypothetical protein;
n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 977
Score = 33.5 bits (73), Expect = 4.3
Identities = 25/96 (26%), Positives = 36/96 (37%)
Frame = +3
Query: 318 P*PDGTWQKRSLETHCGXPQWLQVVWMNSTPVAGGAMVKTRCWYHLEQFLRALPMEHTV* 497
P P T + S++ WL +W P A + R WY L P V
Sbjct: 583 PVPGVTGLRNSVDPDPEPVPWLSWLWNIVHPEAEFVLRPFRLWYTLNAEPEHFPRPSAVQ 642
Query: 498 NTEGPKSLRKPRGSKRSERMGIIXNPNGPPLYGVQW 605
NT P P S+ R ++ +P+ P+ G W
Sbjct: 643 NTADPAPSSVPGMSE--TRNTVVPDPDPEPVPGPSW 676
>UniRef50_UPI0000E47DE5 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 862
Score = 33.5 bits (73), Expect = 4.3
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = -3
Query: 458 FEMIPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYD 279
F+ + S+F+ +R H + + R +T Q SF R++ WN LP V
Sbjct: 771 FDRVNPSKFFQLATGSTTRGHDFKIVKQRFNTRLRQYSFSIRSVNNWNALPKEVV-NAAT 829
Query: 278 MSFFKRGLGEY 246
++ FK L Y
Sbjct: 830 INQFKSSLERY 840
>UniRef50_A6GD31 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 439
Score = 33.5 bits (73), Expect = 4.3
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 347 ISGNALWMXAVAPGSMDELYSGGGRC-DGKNEMLVSSRTIPQ 469
+ G LW A+APG + GG C G++E+ VS R++ Q
Sbjct: 185 VDGETLWSEAIAPGLAEFDEIGGIECAPGQDEVYVSGRSVDQ 226
>UniRef50_UPI0000E4A923 Cluster: PREDICTED: similar to angiotensin
converting enzyme, partial; n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to angiotensin
converting enzyme, partial - Strongylocentrotus
purpuratus
Length = 926
Score = 32.7 bits (71), Expect = 7.5
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = -3
Query: 356 FQRSFLPRTIRLWNELPSS 300
++ SF PRTIR+WN+LP++
Sbjct: 884 YKYSFYPRTIRIWNQLPAT 902
>UniRef50_UPI0000E47148 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 810
Score = 32.3 bits (70), Expect = 9.9
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Frame = -3
Query: 602 LDSIQRRPVRIXDNPHSL-GSFGASGFAEGLRSL---------CILYRMFHGECSEELFE 453
L+ +QRR +R HS S A GL +L ++Y++ H + + L +
Sbjct: 688 LEKVQRRGIRFITGNHSREDSVTAMRLNIGLPTLQERRLESRLAMMYKLLHHQIAIPLPD 747
Query: 452 MIPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSV 297
I S+ T R + H L S+ ++ SF PRT++ W+ELP+++
Sbjct: 748 YI--SQKDRATIRCQ---HHLRFTRLGTSSDSYKYSFFPRTMKDWDELPTNI 794
>UniRef50_Q9TPK4 Cluster: MHC class II antigen; n=9;
Gnathostomata|Rep: MHC class II antigen - Torpedo
californica (Pacific electric ray)
Length = 66
Score = 32.3 bits (70), Expect = 9.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 270 EGHVIALGKHRGGELIP*PDGTWQKRSLETHCGXPQWL 383
+GH + K GGE++P DGT+Q R T QWL
Sbjct: 18 DGHPVPGEKVTGGEVLPNGDGTYQLRKTLTVDEDEQWL 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,588,179
Number of Sequences: 1657284
Number of extensions: 16717216
Number of successful extensions: 43200
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 41324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43193
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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