Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0653
(631 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6) 38 0.005
SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5) 38 0.005
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 38 0.005
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 38 0.007
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 38 0.007
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8) 36 0.021
SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8) 36 0.021
SB_40765| Best HMM Match : DX (HMM E-Value=1.4) 36 0.021
SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0) 36 0.021
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 36 0.027
SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072) 35 0.047
SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0) 35 0.047
SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082) 35 0.047
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 35 0.047
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 35 0.047
SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1) 35 0.063
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 34 0.11
SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4) 34 0.11
SB_19530| Best HMM Match : EMI (HMM E-Value=3.5) 33 0.14
SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 33 0.14
SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 33 0.19
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 33 0.19
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3) 33 0.25
SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33) 33 0.25
SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 33 0.25
SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 31 0.58
SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5) 31 0.58
SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5) 31 1.0
SB_4799| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7) 30 1.8
SB_28584| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 30 1.8
SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2) 29 3.1
SB_15460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_50226| Best HMM Match : LEA_4 (HMM E-Value=0.18) 29 4.1
SB_27901| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_16620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2) 28 7.2
SB_53803| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16) 27 9.5
SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 27 9.5
SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9) 27 9.5
SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 27 9.5
SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)
Length = 231
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -3
Query: 398 HPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYDMSFFKRGL 255
H + L T ++ SFLPR +RLWN LP SV R F GL
Sbjct: 184 HSEFYTILNARTDIYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHSGL 231
>SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5)
Length = 210
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = -3
Query: 515 LRSLCILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLP 336
L S IL+ FH ++ +P R+ R R YY + L+ +T+ F SF
Sbjct: 115 LTSQAILFYKFHNSL---IYAKLPD--LVTRSTRSTRRKELYYNQ-LQANTLAFNYSFFA 168
Query: 335 RTIRLWNELPSSV 297
R IR+WN LP+ V
Sbjct: 169 RAIRIWNLLPNDV 181
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = -3
Query: 515 LRSLCILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLP 336
L S IL+ FH ++ +P R+ R R YY + L+ +T+ F SF
Sbjct: 475 LTSQAILFYKFHNSL---IYAKLPD--LVTRSTRSTRRKELYYNQ-LQANTLAFNYSFFA 528
Query: 335 RTIRLWNELPSSV 297
R IR+WN LP+ V
Sbjct: 529 RAIRIWNLLPNDV 541
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYDMSFFKRGL 255
SR H L+ + + F SF PRTIR WN LP+ V D+ FK L
Sbjct: 1627 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSAL 1676
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -3
Query: 416 RHRSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYDMSFFK 264
R R HP PL S+ SF RTI WN LP+ +F E + FK
Sbjct: 823 RKTRRSHPESFIPLSTSSASEHLSFFSRTIIQWNNLPALLFNEPCSLPIFK 873
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYDMSFFKRGL 255
SR H L+ + + F SF PRTIR WN LP+ V D+ FK L
Sbjct: 1073 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSAL 1122
>SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = -3
Query: 410 RSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYDMSFFKRGL 255
R++ +Y P + + ++ SFLPR +RLWN LP SV R F GL
Sbjct: 182 RTQHSEFYTIPNARTDI-YKYSFLPRALRLWNNLPQSVIDMRGCPEAFHAGL 232
>SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = -3
Query: 515 LRSLCILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLP 336
L S IL+ FH + T R+ R R YY + L+ +T+ F SF
Sbjct: 269 LTSQAILFYKFHNSLIHAKLPDLVT-----RSTRSTRRKELYYNQ-LQANTLAFNYSFFA 322
Query: 335 RTIRLWNELPSSV 297
R IR+WN LP+ V
Sbjct: 323 RAIRIWNLLPNDV 335
>SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/75 (22%), Positives = 38/75 (50%)
Frame = -3
Query: 527 FAEGLRSLCILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQR 348
+ + L +L+++ +G+ S L ++ + + T + S + + + ++
Sbjct: 195 YRRDITDLVLLFKIKNGDVSISLASLLSPATSRYNTRNYHSNNYRLFFT---HNQNYYRN 251
Query: 347 SFLPRTIRLWNELPS 303
S+ PRT++LWN LPS
Sbjct: 252 SYFPRTVKLWNSLPS 266
>SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 174
Score = 36.3 bits (80), Expect = 0.021
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = -3
Query: 506 LCILYRMFHGECSEELFEMIPTSRFY--HRTARHR-SRVHPYYLEPLRXSTVRFQRSFLP 336
L +LY++ G+ I TS + H+ R R S YY E + + ++ SF P
Sbjct: 88 LTLLYKLSRGQID------IDTSMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYSFFP 139
Query: 335 RTIRLWNELPSSVFPERYDMSFFKRGLGEY 246
RTIR WN LP+ + E + FKR L Y
Sbjct: 140 RTIRHWNTLPNELV-ELGSIEHFKRDLEIY 168
>SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 361
Score = 36.3 bits (80), Expect = 0.021
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = -3
Query: 506 LCILYRMFHGECSEELFEMIPTSRFY--HRTARHR-SRVHPYYLEPLRXSTVRFQRSFLP 336
L +LY++ G+ I TS + H+ R R S YY E + + ++ SF P
Sbjct: 275 LTLLYKLSRGQID------IDTSMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYSFFP 326
Query: 335 RTIRLWNELPSSVFPERYDMSFFKRGLGEY 246
RTIR WN LP+ + E + FKR L Y
Sbjct: 327 RTIRHWNTLPNELV-ELGSIEHFKRDLEIY 355
>SB_40765| Best HMM Match : DX (HMM E-Value=1.4)
Length = 278
Score = 36.3 bits (80), Expect = 0.021
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = -3
Query: 506 LCILYRMFHGECSEELFEMIPTSRFY--HRTARHR-SRVHPYYLEPLRXSTVRFQRSFLP 336
L +LY++ G+ I TS + H+ R R S YY E + + ++ SF P
Sbjct: 192 LTLLYKLSRGQID------IDTSTYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYSFFP 243
Query: 335 RTIRLWNELPSSVFPERYDMSFFKRGLGEY 246
RTIR WN LP+ + E + FKR L Y
Sbjct: 244 RTIRHWNTLPNELV-ELDSIEHFKRDLEIY 272
>SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 666
Score = 36.3 bits (80), Expect = 0.021
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = -3
Query: 506 LCILYRMFHGECSEELFEMIPTSRFY--HRTARHR-SRVHPYYLEPLRXSTVRFQRSFLP 336
L +LY++ G+ I TS + H+ R R S YY E + + ++ SF P
Sbjct: 580 LTLLYKLSRGQID------IDTSMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYSFFP 631
Query: 335 RTIRLWNELPSSVFPERYDMSFFKRGLGEY 246
RTIR WN LP+ + E + FKR L Y
Sbjct: 632 RTIRHWNTLPNELV-ELGSIEHFKRDLEIY 660
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 35.9 bits (79), Expect = 0.027
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = -3
Query: 515 LRSLCILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLP 336
L S IL+ FH ++ +P R+ R R Y L+ +T+ F SF
Sbjct: 1185 LTSQAILFYKFHNSL---IYAKLPD--LVTRSTRSTRRKE-LYCNQLQANTLTFNYSFFA 1238
Query: 335 RTIRLWNELPSSV 297
R IR+WN LP+ V
Sbjct: 1239 RAIRIWNLLPNDV 1251
>SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -3
Query: 425 RTARHRSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSV 297
R+ R R YY + L+ +T+ F SF R IR+WN LP+ V
Sbjct: 245 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 286
>SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)
Length = 375
Score = 35.1 bits (77), Expect = 0.047
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = -3
Query: 506 LCILYRMFHGECSEELFEMIPTSRFY--HRTARHR-SRVHPYYLEPLRXSTVRFQRSFLP 336
L +LY++ G+ I T+ + H+ R R S YY E + + ++ SF P
Sbjct: 289 LTLLYKLSRGQID------IDTNMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYSFFP 340
Query: 335 RTIRLWNELPSSVFPERYDMSFFKRGLGEY 246
RTIR WN LP+ + E + FKR L Y
Sbjct: 341 RTIRHWNTLPNELV-ELGSIEHFKRDLEIY 369
>SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSV 297
+R H + L+ + + + SF PR IR+WN LPS+V
Sbjct: 122 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 158
>SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 581
Score = 35.1 bits (77), Expect = 0.047
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = -3
Query: 506 LCILYRMFHGECSEELFEMIPTSRFY--HRTARHR-SRVHPYYLEPLRXSTVRFQRSFLP 336
L +LY++ G+ I T+ + H+ R R S YY E + + ++ SF P
Sbjct: 495 LTLLYKLSRGQID------IDTNMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYSFFP 546
Query: 335 RTIRLWNELPSSVFPERYDMSFFKRGLGEY 246
RTIR WN LP+ + E + FKR L Y
Sbjct: 547 RTIRHWNTLPNELV-ELGSIEHFKRDLEIY 575
>SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082)
Length = 506
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSV 297
+R H + L+ + + + SF PR IR+WN LPS+V
Sbjct: 441 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 477
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSV 297
+R H + L+ + + + SF PR IR+WN LPS+V
Sbjct: 1427 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 1463
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSV 297
+R H + L+ + + + SF PR IR+WN LPS+V
Sbjct: 387 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 423
>SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1)
Length = 243
Score = 34.7 bits (76), Expect = 0.063
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 410 RSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSV 297
RSR + ++ + + SF PRTIR WN LPS V
Sbjct: 177 RSRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 214
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 33.9 bits (74), Expect = 0.11
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = -3
Query: 506 LCILYRMFHGECSEELFEMIPTSRFY--HRTARHRSRVHPYYLEPLRXSTVRFQRSFLPR 333
L +LY++ G+ I T+ + H+ R R+ H + + + ++ SF PR
Sbjct: 738 LTLLYKLSRGQID------IDTNMYLRPHQDLRTRNS-HNFKCYQEKATKNKYFYSFFPR 790
Query: 332 TIRLWNELPSSVFPERYDMSFFKRGLGEY 246
TIR WN LP+ + E + FKR L Y
Sbjct: 791 TIRHWNTLPNELV-ELGSIEHFKRDLEIY 818
>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 888
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -3
Query: 449 IPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERY 282
+P S R HP + + T F+ SF+PR IRLWN L +V Y
Sbjct: 713 LPLSTLSKPLRRSERTSHPEHYDIPYARTNIFKYSFVPRAIRLWNSLEVTVVLAAY 768
>SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4)
Length = 443
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSV 297
+R H + L + + F SF PR IR WN LP ++
Sbjct: 262 TRRHSLSFQQLHSNILSFNYSFFPRAIRAWNLLPDNI 298
>SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)
Length = 244
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/73 (31%), Positives = 31/73 (42%)
Frame = -3
Query: 506 LCILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLPRTI 327
L YR+ G SE T + Y T ++ HP + T F+ SF P I
Sbjct: 167 LAFFYRINKG-LSEISMPPYATPQMYTITRQY----HPQRFALVSCKTNVFKESFFPHAI 221
Query: 326 RLWNELPSSVFPE 288
R+WN LP S +
Sbjct: 222 RMWNGLPVSTITQ 234
>SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -3
Query: 527 FAEGLRSLCILYRMFHGECSEELFEMIPTSRFYHRTARHRSR-VHPYYLEPLRXSTVRFQ 351
+ + L +L+++ +G+ S ++ + T+R+ +R HP +
Sbjct: 692 YRRDITDLVLLFKIKNGDVSISSASLLSPA-----TSRYNTRSYHPNNYRLFSTHNQNYY 746
Query: 350 R-SFLPRTIRLWNELPS 303
R S+ PRT++LWN LPS
Sbjct: 747 RNSYFPRTVKLWNSLPS 763
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYDMSFFKRGLG 252
SR + ++ + + SF PRTIR WN LPS V E + FK G
Sbjct: 440 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSKTG 490
>SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -3
Query: 527 FAEGLRSLCILYRMFHGECSEELFEMIPTSRFYHRTARHRSR-VHPYYLEPLRXSTVRFQ 351
+ + L +L+++ +G+ S ++ + T+R+ +R HP +
Sbjct: 195 YRRDITDLVLLFKIKNGDVSISSASLLSPA-----TSRYNTRSYHPNNYRLFSTHNQNYY 249
Query: 350 R-SFLPRTIRLWNELPS 303
R S+ PRT++LWN LPS
Sbjct: 250 RNSYFPRTVKLWNSLPS 266
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYDMSFFK 264
SR + ++ + + SF PRTIR WN LPS V E + FK
Sbjct: 853 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFK 899
>SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 198
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYDMSFFK 264
SR + ++ + + SF PRTIR WN LPS V E + FK
Sbjct: 133 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFK 179
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYDMSFFK 264
SR + ++ + + SF PRTIR WN LPS V E + FK
Sbjct: 544 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFK 590
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFPERYDMSFFK 264
SR + ++ + + SF PRTIR WN LPS V E + FK
Sbjct: 772 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFK 818
>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 32.7 bits (71), Expect = 0.25
Identities = 23/73 (31%), Positives = 31/73 (42%)
Frame = -3
Query: 506 LCILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLPRTI 327
L YR+ G SE T + Y T ++ HP + T F+ SF P I
Sbjct: 585 LAFFYRINKG-LSEISTPPYATPQMYTITRQY----HPQRFALVSCKTNVFKESFFPHAI 639
Query: 326 RLWNELPSSVFPE 288
R+WN LP S +
Sbjct: 640 RMWNGLPVSTITQ 652
>SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3)
Length = 243
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSV 297
SR + ++ + + SF PRTIR WN LPS V
Sbjct: 178 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 214
>SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)
Length = 609
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = -3
Query: 506 LCILYRMFHGECSEELFEMIPTSRFY--HRTARHR-SRVHPYYLEPLRXSTVRFQRSFLP 336
L +LY++ G+ I TS + H+ R R S YY E + + ++ SF P
Sbjct: 521 LTLLYKLSRGQID------IDTSMYLRPHQDLRTRNSHNFKYYQE--KATKNKYFYSFFP 572
Query: 335 RTIRLWNELPSSV 297
RTIR WN LP+ +
Sbjct: 573 RTIRHWNTLPNEL 585
>SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 152
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSV 297
SR + ++ + + SF PRTIR WN LPS V
Sbjct: 87 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPSEV 123
>SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -3
Query: 434 FYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSVFP 291
++ RT+ S + + L P + + F SF RTI +WN LP +VFP
Sbjct: 804 YFTRTSACNS--YQFSLLPAKINAFLF--SFYSRTIPVWNALPQAVFP 847
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 340 CHVPSGYGMSSPPRCFPSAMTCPSSNEAWES 248
C P GY + +P RC S +C SS A ES
Sbjct: 2147 CSCPQGYRLENPYRCVLSNASCASSEFACES 2177
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -1
Query: 376 CGHPQCVSRDLFCHVPSGYGMSSPPRCFPSAMTCPSSNEAWESIKR-*AAAWLC 218
C +C+SRD C + G SS + +TCP+ + +R + W C
Sbjct: 3053 CPSGRCISRDWLCDGDNDCGDSSDEKAGECHVTCPAGQARCATGRRCIPSEWRC 3106
>SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 284
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 407 SRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELPSSV 297
SR + ++ + + SF PRTIR WN LP+ V
Sbjct: 219 SRTNSSKYNQIQSNVLSHSYSFFPRTIRTWNLLPAQV 255
>SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = -3
Query: 425 RTARHRSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELP 306
RT + RS HP L T F+ SF RTI+ WN+LP
Sbjct: 346 RTRQLRSS-HPDKFIELCPRTEAFKNSFFCRTIKEWNKLP 384
>SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5)
Length = 294
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -3
Query: 425 RTARHRSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELP 306
RT + RS HP L +T ++ SF RTI+ WN+LP
Sbjct: 237 RTRQLRSS-HPDKFIELCPTTEAYKNSFFCRTIKEWNKLP 275
>SB_4799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 167 HLMVSGYRRPWTSAMPGAEPSRCLPLNTLPSLV*RRTCH-SARETPRRGAHSIAGWYVAK 343
HLM SG RRP ++ A P C+ + ++ + + C +A P+ A +A VA+
Sbjct: 287 HLMESGGRRPACPSLDVARPKVCMEMLSVSVALVAQYCEANAGPRPKLSAQPLA---VAR 343
Query: 344 KISG 355
K+ G
Sbjct: 344 KLGG 347
>SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7)
Length = 282
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWNELPSSV 297
L+ + + + SF R IR+WN LPS+V
Sbjct: 227 LQSNILSYNYSFFARAIRIWNLLPSNV 253
>SB_28584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -3
Query: 509 SLC-ILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLPR 333
S+C ++Y +G + + ++ H S + +Y++ R R SF
Sbjct: 71 SVCHLMYDTRNGTAPPNILNLFTDTKSVHSYNTRSSTSNKFYIQKSRLEIQR--NSFSRV 128
Query: 332 TIRLWNELPSSV 297
R+WNELP S+
Sbjct: 129 GARVWNELPQSL 140
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 425 RTARHRSRVHPYYLEPLRXSTVRFQRSFLPRTIRLWNELP 306
RT + RS + ++E L T ++ SF RTI+ WN+LP
Sbjct: 643 RTRQLRSSLPDKFIE-LCPRTEAYKNSFFCRTIKEWNKLP 681
>SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2)
Length = 251
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = -3
Query: 506 LCILYRMFHGECSEELFEMIPTSRFYHRTARHRSRVHPYYLEPLRXSTVRFQRSFLPRTI 327
L + Y++ HG + +P R + +S Y P + ++SF P TI
Sbjct: 169 LLMFYKIHHGLVVTDGLPAVPPMYIISRHMKSQS-----YKVPPSSTDYHKKKSFFPPTI 223
Query: 326 RLWNELP 306
R WN LP
Sbjct: 224 RDWNCLP 230
>SB_15460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 467 QSTPHGTYGIKYRGTEVPPQTQRLQTIRENGDYRQS 574
Q+ PH + + G P Q QRLQ +R GD RQS
Sbjct: 286 QAPPHMSTHVPQAGFPHPDQPQRLQEVR--GDARQS 319
>SB_50226| Best HMM Match : LEA_4 (HMM E-Value=0.18)
Length = 760
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 240 LLILSQASFEEGHVIA-LGKHRGGELIP*PDGTWQKRSLETHC 365
L + SQAS G V HR P DG WQ+R ++ HC
Sbjct: 57 LFLSSQASHNIGFVSRPQNSHRSD---PVADGYWQRRVIQVHC 96
>SB_27901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 167 HLMVSGYRRPWTSAMPGAEPSRCLPLNTLPSLV*RRTCH-SARETPRRGAHSIAGWYVAK 343
HLM SG RRP ++ A P C+ + ++ + + C +A P+ A +A VA+
Sbjct: 70 HLMESGGRRPACPSLDVARPKVCMEMLSVSVALVAQYCEANAGPRPKLSAQPLA---VAR 126
Query: 344 KISGNA 361
K+ +A
Sbjct: 127 KLVTDA 132
>SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFDMSFIPRTIRTWN 124
>SB_16620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 200 TSAMPGAEPSRCLPLNTLPSLV*RRTCHSARETPRRGAHSIAGW--YVAKKISGN 358
++A PG + R L + LV ++ S P++ +HS+ GW Y KK + N
Sbjct: 7 SNAGPGKKRKRPAKLPPMDELV-QKAKQSFATKPKKESHSVCGWNPYTKKKSNKN 60
>SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -1
Query: 367 PQCVSRDLFCHVPSGYGMSSPPRCFPSAMTCPSS-NEAWESIKR*AAAWLCPWHC*SPWA 191
P V++ L VP+ S P + + + PS N W + R W P +PW+
Sbjct: 486 PPPVTQKLDACVPNTKVTESTPSRYNTPLPTPSRYNTPWSTPSRYNTPWSTPSRYNTPWS 545
Query: 190 TVTTHH 173
T + ++
Sbjct: 546 TPSRYN 551
>SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2)
Length = 318
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -3
Query: 233 SGLALPLALLKSMGDGNHSPSGGPYARLPT 144
SG+ PLA S D H P GGP A PT
Sbjct: 33 SGIFSPLASSTSASDSRHRPVGGP-AYSPT 61
>SB_53803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 508 PSVFYTVCSMGSALRNCSR*YQHLVFTIAPPATGVEFIHTTWSHCGHPQCVSRDLFCHVP 329
P+V +TV ++ S + N ++VF+ P G IH+T CG PQC C +
Sbjct: 394 PNVVFTVPNVVSTVPNVVSTVPNVVFS---PQCG---IHST--QCGSPQCGIHSTQCGIH 445
Query: 328 SGYGMSSPPRC 296
S P+C
Sbjct: 446 STQCGIHSPQC 456
>SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16)
Length = 453
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 398 LQANVNAFGMSFIPRTIRTWN 418
>SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 467 LQANVNAFGMSFIPRTIRTWN 487
>SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 208 LQANVNAFGMSFIPRTIRTWN 228
>SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 837 LQANVNAFGMSFIPRTIRTWN 857
>SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 442 LQANVNAFGMSFIPRTIRTWN 462
>SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 377 LRXSTVRFQRSFLPRTIRLWN 315
L+ + F SF+PRTIR WN
Sbjct: 55 LQANVNAFGMSFIPRTIRTWN 75
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 366 GXPQWLQVVWMNSTPVAGGAMVKTRCWYHLEQFLRA 473
G + QVVW S + G RC YH+ ++ +A
Sbjct: 687 GTGHFTQVVWKGSVELGFGGGRAGRCTYHVGRYKKA 722
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,627,440
Number of Sequences: 59808
Number of extensions: 524813
Number of successful extensions: 2332
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 2155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2329
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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