Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0653
(631 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 30 3.0
AE014296-2438|AAF49698.1| 296|Drosophila melanogaster CG13467-P... 30 3.0
AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple... 29 6.9
AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM ... 29 6.9
AJ243708-1|CAB57344.3| 963|Drosophila melanogaster prickle pk i... 29 6.9
AE014298-1779|AAF48173.1| 341|Drosophila melanogaster CG15729-P... 29 6.9
AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC... 29 6.9
AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB... 29 6.9
AE013599-308|AAM68908.1| 963|Drosophila melanogaster CG11084-PA... 29 6.9
AY052134-1|AAK93558.1| 704|Drosophila melanogaster SD08605p pro... 28 9.1
AE014134-1417|AAS64654.2| 152|Drosophila melanogaster CG18103-P... 28 9.1
AE014134-536|AAF51163.1| 704|Drosophila melanogaster CG17264-PA... 28 9.1
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 460 NSSEHSPWNIRYKIQRDRSPSANPEAPNDP 549
+S + PW + YK+ R + SA +P DP
Sbjct: 341 DSVDDDPWGLAYKVVRKKLNSAGAGSPQDP 370
>AE014296-2438|AAF49698.1| 296|Drosophila melanogaster CG13467-PA
protein.
Length = 296
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 395 DELYSGGGRCDGKNEMLVSSRTIPQSTPHGTYGIKYRGTEVPPQTQ 532
DE+ GGG G N+ ++ +T+PQ +P+ G PP TQ
Sbjct: 21 DEV-DGGGEAAGSNDSVLGGQTMPQISPNA----PLEGNVSPPPTQ 61
>AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple
isoform protein.
Length = 1299
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 331 PSGYGMSSPPRCFPSAMTCPSSNEAWESIKR*AAAWLCP 215
PSG G+++PP M PSS+ A AAA + P
Sbjct: 374 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILP 412
>AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM
isoform protein.
Length = 1029
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 331 PSGYGMSSPPRCFPSAMTCPSSNEAWESIKR*AAAWLCP 215
PSG G+++PP M PSS+ A AAA + P
Sbjct: 104 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILP 142
>AJ243708-1|CAB57344.3| 963|Drosophila melanogaster prickle pk
isoform protein.
Length = 963
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 331 PSGYGMSSPPRCFPSAMTCPSSNEAWESIKR*AAAWLCP 215
PSG G+++PP M PSS+ A AAA + P
Sbjct: 38 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILP 76
>AE014298-1779|AAF48173.1| 341|Drosophila melanogaster CG15729-PA
protein.
Length = 341
Score = 28.7 bits (61), Expect = 6.9
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +2
Query: 269 RRTCHSARETPRRGAHSIAGWYVAKKISGNALWMXAVAPGSMDELYSGGGRCDGK 433
R+ HS R T + A AG I G A A P S D + S GG DG+
Sbjct: 6 RKVNHSLRNTSKSQAQQAAGGDGI--IGGPATGATAATPQSTDTISSAGGFGDGQ 58
>AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC,
isoform C protein.
Length = 1299
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 331 PSGYGMSSPPRCFPSAMTCPSSNEAWESIKR*AAAWLCP 215
PSG G+++PP M PSS+ A AAA + P
Sbjct: 374 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILP 412
>AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB,
isoform B protein.
Length = 1029
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 331 PSGYGMSSPPRCFPSAMTCPSSNEAWESIKR*AAAWLCP 215
PSG G+++PP M PSS+ A AAA + P
Sbjct: 104 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILP 142
>AE013599-308|AAM68908.1| 963|Drosophila melanogaster CG11084-PA,
isoform A protein.
Length = 963
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 331 PSGYGMSSPPRCFPSAMTCPSSNEAWESIKR*AAAWLCP 215
PSG G+++PP M PSS+ A AAA + P
Sbjct: 38 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILP 76
>AY052134-1|AAK93558.1| 704|Drosophila melanogaster SD08605p
protein.
Length = 704
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 501 TEGPKSLRKPRGSKRSERMGIIXNPNGPPLYGVQWKK 611
TEGP R+PR S + MGII N PL +W++
Sbjct: 578 TEGPTVSRRPRPSGGFDIMGIIRNAIDLPL---KWRR 611
>AE014134-1417|AAS64654.2| 152|Drosophila melanogaster CG18103-PA
protein.
Length = 152
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -3
Query: 578 VRIXDNPHSLGSFGASGFAEGLRSLCILYR--MFHGEC 471
+R PHS G G S + E L +C Y + HG C
Sbjct: 115 LRSAQRPHSWGPVGTSSYMESL--MCAFYEPALLHGPC 150
>AE014134-536|AAF51163.1| 704|Drosophila melanogaster CG17264-PA
protein.
Length = 704
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 501 TEGPKSLRKPRGSKRSERMGIIXNPNGPPLYGVQWKK 611
TEGP R+PR S + MGII N PL +W++
Sbjct: 578 TEGPTVSRRPRPSGGFDIMGIIRNAIDLPL---KWRR 611
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,127,825
Number of Sequences: 53049
Number of extensions: 793445
Number of successful extensions: 2024
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2024
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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