Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0652
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       24   1.4  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    24   1.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   1.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   1.8  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    23   1.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.4  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   4.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   4.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.3  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   9.6  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +1

Query: 325 FSRVETITIYTKFHQNHF--RGPRVEI 399
           ++R +T+ +  +FH NH+  R  R+EI
Sbjct: 13  YTRFQTLELEKEFHFNHYLTRRRRIEI 39


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +1

Query: 325 FSRVETITIYTKFHQNHF--RGPRVEI 399
           ++R +T+ +  +FH NH+  R  R+EI
Sbjct: 164 YTRFQTLELEKEFHFNHYLTRRRRIEI 190


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +1

Query: 325 FSRVETITIYTKFHQNHF--RGPRVEI 399
           ++R +T+ +  +FH NH+  R  R+EI
Sbjct: 223 YTRFQTLELEKEFHFNHYLTRRRRIEI 249


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +1

Query: 325 FSRVETITIYTKFHQNHF--RGPRVEI 399
           ++R +T+ +  +FH NH+  R  R+E+
Sbjct: 230 YTRYQTLELEKEFHTNHYLTRRRRIEM 256


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +1

Query: 325 FSRVETITIYTKFHQNHF--RGPRVEI 399
           ++R +T+ +  +FH NH+  R  R+E+
Sbjct: 12  YTRYQTLELEKEFHTNHYLTRRRRIEM 38


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 519 RYYIQVFSSLLLC 481
           RY+ +VFSSLL C
Sbjct: 89  RYFEEVFSSLLSC 101


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 519 RYYIQVFSSLLLC 481
           RY+ +VFSSLL C
Sbjct: 89  RYFEEVFSSLLSC 101


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 345 YDLYQISSKSFQRSESGNITDMV 413
           ++LY ++SKS Q S    +T  V
Sbjct: 288 FNLYHLASKSNQLSREAKVTKTV 310


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 345 YDLYQISSKSFQRSESGNITDMV 413
           ++LY ++SKS Q S    +T  V
Sbjct: 288 FNLYHLASKSNQLSREAKVTKTV 310


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 505 LNVITGMYLRVYEYLRLIVVTVLKLL 582
           L+ I   YL+ Y Y++L+V  ++  +
Sbjct: 40  LSSIDRPYLKSYTYIKLVVSVLMDFI 65


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 260 VIHTLYSVSRFVPGAVNSNPYYFPGLKLLRFIPNF 364
           V+  LY+V RF   +   N  +  G  LLRF+  F
Sbjct: 372 VMKLLYNVLRFGAESQTINFMFSFGFILLRFLSVF 406


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 434 NINTKVCNHVCY 399
           NIN  +C HV Y
Sbjct: 47  NINANLCTHVHY 58


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 408 CLLYFHSRTSEMILMKFGINRNSFN 334
           C    HS +S+++ + F ++ +S+N
Sbjct: 214 CGASVHSESSKVLPLLFSVSSSSYN 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,186
Number of Sequences: 336
Number of extensions: 3373
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)