Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0652
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    24   4.0  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   5.3  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   7.0  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   7.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   9.2  

>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 175 VRPEAFSVSPGQVDEHG 125
           VRP+ FS + G V EHG
Sbjct: 134 VRPDIFSETGGLVTEHG 150


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +1

Query: 325 FSRVETITIYTKFHQNHF--RGPRVEI 399
           ++R +T+ +  +FH NH+  R  R+EI
Sbjct: 145 YTRFQTLELEKEFHFNHYLTRRRRIEI 171


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +1

Query: 325 FSRVETITIYTKFHQNHF--RGPRVEI 399
           ++R +T+ +  +FH NH+  R  R+E+
Sbjct: 226 YTRYQTLELEKEFHTNHYLTRRRRIEM 252


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +1

Query: 325 FSRVETITIYTKFHQNHF--RGPRVEI 399
           ++R +T+ +  +FH NH+  R  R+E+
Sbjct: 243 YTRYQTLELEKEFHTNHYLTRRRRIEM 269


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 347 RFIPNFIKIISEVREWKYNRHGYI 418
           RF+    ++I ++  W + RHG +
Sbjct: 913 RFVRWTHRVIPDIAAWHFRRHGEV 936


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,172
Number of Sequences: 2352
Number of extensions: 13098
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)