Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0652
         (697 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110479-1|CAB60310.2|  311|Caenorhabditis elegans Hypothetical ...    31   0.79 
AF022971-13|AAG23979.1|  325|Caenorhabditis elegans Serpentine r...    29   3.2  
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ...    29   4.2  
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ...    29   4.2  
U80024-6|AAW88410.1|  300|Caenorhabditis elegans Serpentine rece...    28   7.3  
AF000195-2|AAC24267.1|  316|Caenorhabditis elegans Hypothetical ...    28   7.3  
Z49125-4|CAA88936.1|  644|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U80024-7|AAW88409.1|  295|Caenorhabditis elegans Serpentine rece...    27   9.7  

>AL110479-1|CAB60310.2|  311|Caenorhabditis elegans Hypothetical
           protein Y105C5B.1 protein.
          Length = 311

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
 Frame = -3

Query: 671 QRFNRYIFEYKLIEA*KFSKRTILIRFEISRSFKTVTTIRRKYSYTRKYIPVITFKCFHH 492
           + +    F Y L+    F+  T    + + +  K +  I  + +   ++IPV   +  + 
Sbjct: 187 EEYENQFFVYNLVFL-FFTFITGAFYYHLFKIMKNMENIAARSALLNQFIPVFFVQLIYV 245

Query: 491 YFFVIALILSVVKSYVVNNNINTKVCNHVCY-ISTLGPL 378
            FFVI++++S  + Y  N+ IN K+ +HV   ++T+ P+
Sbjct: 246 LFFVISMLIS--RMY-TNSGIN-KLFDHVTISLTTIFPI 280


>AF022971-13|AAG23979.1|  325|Caenorhabditis elegans Serpentine
           receptor, class h protein247 protein.
          Length = 325

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = -3

Query: 605 ILIRFEISRSFKTVTTIRRKYSYTRKYIPVITFKCFHHYFFVIA---LILSVVKSYVVNN 435
           +L  +++ +  K+     R Y   + ++  IT + F  + F+I    +IL VV  +  N 
Sbjct: 210 LLTLYQLFKRNKSFKLSSRSYQLQKNFLIAITLQSFLSFIFIIVPVNIILYVVVFWYYNQ 269

Query: 434 NINTKVC 414
            +N  +C
Sbjct: 270 VLNNIMC 276


>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
            F14F4.3b protein.
          Length = 1427

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 342  YYDLYQISSKSFQRSESGNITDMVTYFCIDIIIYYITFNHREYQGN-YKEVMMKTLECNN 518
            +   ++   ++ +RSE  +I+    Y  +   +  IT  H   Q N + EV+ K L+CN+
Sbjct: 951  FVSCFRAGIRNLKRSE--HISRSPLYDHVSASLEGITTIHTFQQSNRFLEVLKKHLDCNS 1008

Query: 519  GYVF 530
            G +F
Sbjct: 1009 GAIF 1012


>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
            F14F4.3a protein.
          Length = 1400

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 342  YYDLYQISSKSFQRSESGNITDMVTYFCIDIIIYYITFNHREYQGN-YKEVMMKTLECNN 518
            +   ++   ++ +RSE  +I+    Y  +   +  IT  H   Q N + EV+ K L+CN+
Sbjct: 924  FVSCFRAGIRNLKRSE--HISRSPLYDHVSASLEGITTIHTFQQSNRFLEVLKKHLDCNS 981

Query: 519  GYVF 530
            G +F
Sbjct: 982  GAIF 985


>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
            protein F14F4.3b protein.
          Length = 1427

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 342  YYDLYQISSKSFQRSESGNITDMVTYFCIDIIIYYITFNHREYQGN-YKEVMMKTLECNN 518
            +   ++   ++ +RSE  +I+    Y  +   +  IT  H   Q N + EV+ K L+CN+
Sbjct: 951  FVSCFRAGIRNLKRSE--HISRSPLYDHVSASLEGITTIHTFQQSNRFLEVLKKHLDCNS 1008

Query: 519  GYVF 530
            G +F
Sbjct: 1009 GAIF 1012


>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
            protein F14F4.3a protein.
          Length = 1400

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 342  YYDLYQISSKSFQRSESGNITDMVTYFCIDIIIYYITFNHREYQGN-YKEVMMKTLECNN 518
            +   ++   ++ +RSE  +I+    Y  +   +  IT  H   Q N + EV+ K L+CN+
Sbjct: 924  FVSCFRAGIRNLKRSE--HISRSPLYDHVSASLEGITTIHTFQQSNRFLEVLKKHLDCNS 981

Query: 519  GYVF 530
            G +F
Sbjct: 982  GAIF 985


>U80024-6|AAW88410.1|  300|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 8 protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 542 SYTRKYIPVITFKCFHHYFFVIALILSVVKSYVVNNNINTKVCNHVCYISTLGPLK 375
           +Y  +Y P  +FK    Y ++I LI S V+SY +   +  K       ++T   L+
Sbjct: 241 NYVNQY-PFFSFKNIGPYVYIIKLIGSAVESYFIFKILKRKSARTSVVVTTTRTLQ 295


>AF000195-2|AAC24267.1|  316|Caenorhabditis elegans Hypothetical
           protein C32F10.4 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = -3

Query: 554 RRKYSYTRKYIPVITFKCFHHYFFVIALILSVVKSYVVNNNINTKVCN 411
           RRK +Y   Y+  ++   F  +F ++  +++ +  Y+ +NN N  +CN
Sbjct: 90  RRKIAYITAYMLYLSMYTFWVFFLILGAVIACI--YLSDNNDN--ICN 133


>Z49125-4|CAA88936.1|  644|Caenorhabditis elegans Hypothetical
           protein C47G2.4 protein.
          Length = 644

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = -3

Query: 608 TILIRFEISRSFKTVTTIRRKYSYTRKYIPVITFKCFHHYFFVIALI 468
           TI +  ++   F   + +  KYS  RK  P++T   F  ++F + ++
Sbjct: 3   TISLAVQLFIVFLLTSYLLNKYSTIRKQNPIVTISTFIGWYFSLIIV 49


>U80024-7|AAW88409.1|  295|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 7 protein.
          Length = 295

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -3

Query: 524 IPVITFKCFHHYFFVIALILSVVKSYVVN 438
           IP+ +FK    Y ++I L+ S V+SY ++
Sbjct: 246 IPLFSFKNIGPYVYIIKLVGSAVESYFIS 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,673,379
Number of Sequences: 27780
Number of extensions: 292818
Number of successful extensions: 625
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)