Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0651
         (686 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3LWC6 Cluster: Putative uncharacterized protein; n=1; ...    40   0.057
UniRef50_Q4YQK0 Cluster: Putative uncharacterized protein; n=1; ...    39   0.099
UniRef50_Q8IHS8 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_Q4Y5H5 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_Q7RG21 Cluster: Putative uncharacterized protein PY0453...    33   8.6  
UniRef50_Q5DGW2 Cluster: SJCHGC04484 protein; n=1; Schistosoma j...    33   8.6  

>UniRef50_Q3LWC6 Cluster: Putative uncharacterized protein; n=1;
           Bigelowiella natans|Rep: Putative uncharacterized
           protein - Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 160

 Score = 39.9 bits (89), Expect = 0.057
 Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
 Frame = -2

Query: 274 KYTFVSTCFNSLIILRI*LYCTKSKVIYNINTLCIIKSFQYFLF*I-YYYVHKMQL-LQH 101
           K+ F+++  + L  + +  Y    K++Y +  L  + + Q  +F + YYY+ K +L ++H
Sbjct: 49  KFIFLNSLLSLLNCISLREYYKNKKILYIVKRLYFLTTIQLIIFRVKYYYIFKNELKIKH 108

Query: 100 NQCNSLRFLLMH-----YFFTMFLYIKYF 29
           NQ +  +FL+ H      FF + L +K F
Sbjct: 109 NQYH--QFLINHRKLYASFFNVILIVKTF 135


>UniRef50_Q4YQK0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 90

 Score = 39.1 bits (87), Expect = 0.099
 Identities = 22/66 (33%), Positives = 36/66 (54%)
 Frame = -2

Query: 208 KSKVIYNINTLCIIKSFQYFLF*IYYYVHKMQLLQHNQCNSLRFLLMHYFFTMFLYIKYF 29
           K K I NI  +CI+  F Y LF +++Y+ K++   H     +R     Y+ T+++YI Y 
Sbjct: 19  KKKKINNIKGICILCIFVYDLFSVFFYL-KLKRDIHKALKIMR----KYYHTLYIYILYI 73

Query: 28  YNA*IY 11
           Y   +Y
Sbjct: 74  YMYVLY 79


>UniRef50_Q8IHS8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 505

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 28/89 (31%), Positives = 46/89 (51%)
 Frame = -2

Query: 301 N*ENTLKCTKYTFVSTCFNSLIILRI*LYCTKSKVIYNINTLCIIKSFQYFLF*IYYYVH 122
           N +N L     T+V   F  L  L   LY  K++ I+NI+ + +I++ +  +F IY Y+H
Sbjct: 326 NNKNVLSFVNKTYVKN-FECLFYLC--LYNEKNR-IHNIS-INLIRNIENNIFTIYKYIH 380

Query: 121 KMQLLQHNQCNSLRFLLMHYFFTMFLYIK 35
              +      NSL    ++Y   +F+YIK
Sbjct: 381 ICNINTKELLNSLS---LYYLVIIFIYIK 406


>UniRef50_Q4Y5H5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 72

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = -2

Query: 151 FLF*IYYYVHKMQLLQHNQCNSLRFLLMHYFFTMF-LYIKYFYNA*IY 11
           +LF  + YV ++ +   N    + F+ +H++F +F  YI +FYN  +Y
Sbjct: 18  YLFQAHAYVIRILIYYCNLFWYISFIFIHHYFILFYFYIPFFYNCYLY 65


>UniRef50_Q7RG21 Cluster: Putative uncharacterized protein PY04530;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04530 - Plasmodium yoelii yoelii
          Length = 2772

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 19/43 (44%), Positives = 28/43 (65%)
 Frame = +3

Query: 171 IHNVFILYITLDFVQYS*IRNIIRLLKHVETNVYFVHFNVFSQ 299
           + NVF + I LD ++YS I NII L   ++T +Y+ H NV S+
Sbjct: 465 LKNVFEMGI-LDIMEYSEIMNIIFLEDKIKTAIYY-HLNVLSK 505


>UniRef50_Q5DGW2 Cluster: SJCHGC04484 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04484 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 118

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 103 HNQCNSLRFLLMHYFFTMFLYIKYFYNA*IYS 8
           ++ C+ L FLL+HYF+  FL I   Y   +YS
Sbjct: 33  YHVCSFLHFLLIHYFYAPFLVIFVVYPLQLYS 64


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,133,840
Number of Sequences: 1657284
Number of extensions: 9007462
Number of successful extensions: 15565
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15540
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)