Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0651
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015990-1|AAV36875.1| 1449|Drosophila melanogaster RE54461p pro...    30   2.6  
AY051455-1|AAK92879.1| 1126|Drosophila melanogaster GH12050p pro...    30   2.6  
AE014134-732|AAN10345.1| 1126|Drosophila melanogaster CG3054-PB,...    30   2.6  
AE014134-731|AAF51018.3| 1449|Drosophila melanogaster CG3054-PA,...    30   2.6  

>BT015990-1|AAV36875.1| 1449|Drosophila melanogaster RE54461p
           protein.
          Length = 1449

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +3

Query: 165 LMIHNVFILYITLDFVQYS*IRNIIRLLKHVE-TNVYFVHFNVFSQL 302
           +  H VFI  +T+   QY    +I+RL++H+E   + FVHF+  ++L
Sbjct: 761 MQCHQVFIGMVTM---QYQAQNDIVRLVEHLEQACIRFVHFSKENEL 804


>AY051455-1|AAK92879.1| 1126|Drosophila melanogaster GH12050p
           protein.
          Length = 1126

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +3

Query: 165 LMIHNVFILYITLDFVQYS*IRNIIRLLKHVE-TNVYFVHFNVFSQL 302
           +  H VFI  +T+   QY    +I+RL++H+E   + FVHF+  ++L
Sbjct: 438 MQCHQVFIGMVTM---QYQAQNDIVRLVEHLEQACIRFVHFSKENEL 481


>AE014134-732|AAN10345.1| 1126|Drosophila melanogaster CG3054-PB,
           isoform B protein.
          Length = 1126

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +3

Query: 165 LMIHNVFILYITLDFVQYS*IRNIIRLLKHVE-TNVYFVHFNVFSQL 302
           +  H VFI  +T+   QY    +I+RL++H+E   + FVHF+  ++L
Sbjct: 438 MQCHQVFIGMVTM---QYQAQNDIVRLVEHLEQACIRFVHFSKENEL 481


>AE014134-731|AAF51018.3| 1449|Drosophila melanogaster CG3054-PA,
           isoform A protein.
          Length = 1449

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +3

Query: 165 LMIHNVFILYITLDFVQYS*IRNIIRLLKHVE-TNVYFVHFNVFSQL 302
           +  H VFI  +T+   QY    +I+RL++H+E   + FVHF+  ++L
Sbjct: 761 MQCHQVFIGMVTM---QYQAQNDIVRLVEHLEQACIRFVHFSKENEL 804


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,731,526
Number of Sequences: 53049
Number of extensions: 403361
Number of successful extensions: 547
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)