Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0650
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   1.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.6  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +3

Query: 141 YIFISVTRCYSWKFQNYSDY 200
           Y     + C+ W +Q+Y  Y
Sbjct: 115 YCLFVASNCFFWSYQSYMSY 134


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +3

Query: 141 YIFISVTRCYSWKFQNYSDY 200
           Y     + C+ W +Q+Y  Y
Sbjct: 115 YCLFVASNCFFWSYQSYMSY 134


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 271 LRRVPILLGVNCVNQALLFQGRKATDTK 354
           LR   +L   +  N A LFQ  K  DTK
Sbjct: 365 LRHEGVLAEAHSTNAAYLFQKDKFYDTK 392


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 137 RIYLYFSYSLLFVEI 181
           R+Y Y+S++LL   I
Sbjct: 317 RLYFYWSFALLITRI 331


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,840
Number of Sequences: 336
Number of extensions: 2244
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)