Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0650
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093789-1|AAH93789.1| 1165|Homo sapiens transient receptor pote...    34   0.56 
BC093787-1|AAH93787.1| 1165|Homo sapiens transient receptor pote...    34   0.56 
AJ270996-1|CAB66342.1| 1159|Homo sapiens LTRPC5 protein protein.       34   0.56 
AF177473-1|AAF26288.1| 1165|Homo sapiens MTR1 protein.                 34   0.56 

>BC093789-1|AAH93789.1| 1165|Homo sapiens transient receptor potential
            cation channel, subfamily M, member 5 protein.
          Length = 1165

 Score = 33.9 bits (74), Expect = 0.56
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
 Frame = +3

Query: 45   SFPSIFA-WTQLKVLLRFNLTFIVSIR--LLSTFEYIF--ISVTRCYSWKFQNYSDYRRY 209
            S PS++A W  + +L+ F L   V +   L++ F Y F  +       WKFQ Y+    Y
Sbjct: 945  SCPSLYANWLVILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWKFQRYNLIVEY 1004

Query: 210  HKIKILSPRF 239
            H+   L+P F
Sbjct: 1005 HERPALAPPF 1014


>BC093787-1|AAH93787.1| 1165|Homo sapiens transient receptor potential
            cation channel, subfamily M, member 5 protein.
          Length = 1165

 Score = 33.9 bits (74), Expect = 0.56
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
 Frame = +3

Query: 45   SFPSIFA-WTQLKVLLRFNLTFIVSIR--LLSTFEYIF--ISVTRCYSWKFQNYSDYRRY 209
            S PS++A W  + +L+ F L   V +   L++ F Y F  +       WKFQ Y+    Y
Sbjct: 945  SCPSLYANWLVILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWKFQRYNLIVEY 1004

Query: 210  HKIKILSPRF 239
            H+   L+P F
Sbjct: 1005 HERPALAPPF 1014


>AJ270996-1|CAB66342.1| 1159|Homo sapiens LTRPC5 protein protein.
          Length = 1159

 Score = 33.9 bits (74), Expect = 0.56
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
 Frame = +3

Query: 45   SFPSIFA-WTQLKVLLRFNLTFIVSIR--LLSTFEYIF--ISVTRCYSWKFQNYSDYRRY 209
            S PS++A W  + +L+ F L   V +   L++ F Y F  +       WKFQ Y+    Y
Sbjct: 939  SCPSLYANWLVILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWKFQRYNLIVEY 998

Query: 210  HKIKILSPRF 239
            H+   L+P F
Sbjct: 999  HERPALAPPF 1008


>AF177473-1|AAF26288.1| 1165|Homo sapiens MTR1 protein.
          Length = 1165

 Score = 33.9 bits (74), Expect = 0.56
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
 Frame = +3

Query: 45   SFPSIFA-WTQLKVLLRFNLTFIVSIR--LLSTFEYIF--ISVTRCYSWKFQNYSDYRRY 209
            S PS++A W  + +L+ F L   V +   L++ F Y F  +       WKFQ Y+    Y
Sbjct: 945  SCPSLYANWLVILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWKFQRYNLIVEY 1004

Query: 210  HKIKILSPRF 239
            H+   L+P F
Sbjct: 1005 HERPALAPPF 1014


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,302,289
Number of Sequences: 237096
Number of extensions: 1017799
Number of successful extensions: 1391
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)