Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0648
         (526 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   3.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 396 LFFVKSI*NF-CSFAVYCYSCIFLYCL 473
           LFF+  I  F C+F ++    +FL C+
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFLLCI 166


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 489 YNSLYLNNIKIYRNNNKLQ 433
           +NSLY  +   +RN  KLQ
Sbjct: 281 HNSLYELDFDTFRNTKKLQ 299


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 73  NENTIIKKYNSCYNIFIIRL 14
           NENTI  K    Y  F+I L
Sbjct: 427 NENTIHSKLCKLYATFLIAL 446


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -2

Query: 477 YLNNIKIYRNNNKLQSYKSF 418
           +LN+++IY  +N++  + +F
Sbjct: 10  FLNSLQIYLQHNQIFGFVTF 29


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -2

Query: 477 YLNNIKIYRNNNKLQSYKSF 418
           +LN+++IY  +N++  + +F
Sbjct: 28  FLNSLQIYLQHNQIFGFVTF 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,622
Number of Sequences: 336
Number of extensions: 2014
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)