Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0646
(464 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 26 0.20
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 26 0.20
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 26 0.20
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 23 1.1
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 2.4
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 22 2.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 5.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 5.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 5.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 5.6
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 25.8 bits (54), Expect = 0.20
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 167 IKNFISVLPRPFMILGDFNSHHTSW 93
I ++ +P P M L DF SH +W
Sbjct: 195 IPPYLFFVPPPLMFLQDFLSHQHAW 219
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 25.8 bits (54), Expect = 0.20
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 167 IKNFISVLPRPFMILGDFNSHHTSW 93
I ++ +P P M L DF SH +W
Sbjct: 428 IPPYLFFVPPPLMFLQDFLSHQHAW 452
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 25.8 bits (54), Expect = 0.20
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 167 IKNFISVLPRPFMILGDFNSHHTSW 93
I ++ +P P M L DF SH +W
Sbjct: 428 IPPYLFFVPPPLMFLQDFLSHQHAW 452
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 23.4 bits (48), Expect = 1.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 240 NDRKALLCEGRGKEEKVLEFLMSRHTPP 323
N K L+CE G+ E L S TPP
Sbjct: 184 NIMKNLICEIDGRHEFFLAEFKSAKTPP 211
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -1
Query: 65 YELLDILDMYSLCILN 18
+E++D ++M+SL ILN
Sbjct: 675 HEIIDKIEMFSLQILN 690
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -1
Query: 65 YELLDILDMYSLCILN 18
+E++D ++M+SL ILN
Sbjct: 951 HEIIDKIEMFSLQILN 966
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -1
Query: 65 YELLDILDMYSLCILN 18
+E++D ++M+SL ILN
Sbjct: 1053 HEIIDKIEMFSLQILN 1068
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -1
Query: 65 YELLDILDMYSLCILN 18
+E++D ++M+SL ILN
Sbjct: 334 HEIIDKIEMFSLQILN 349
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 5.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 137 PFMILGDFNSHHTSW 93
P + L DF SH +W
Sbjct: 451 PVVFLNDFISHQHAW 465
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 5.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 137 PFMILGDFNSHHTSW 93
P + L DF SH +W
Sbjct: 451 PVVFLNDFISHQHAW 465
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 5.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 137 PFMILGDFNSHHTSW 93
P + L DF SH +W
Sbjct: 451 PVVFLNDFISHQHAW 465
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 5.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 137 PFMILGDFNSHHTSW 93
P + L DF SH +W
Sbjct: 451 PVVFLNDFISHQHAW 465
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,058
Number of Sequences: 336
Number of extensions: 1969
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -