Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0645
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 173 5e-42
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 169 7e-41
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 169 7e-41
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 167 2e-40
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 161 2e-38
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 161 2e-38
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 148 1e-34
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 147 2e-34
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 147 3e-34
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 146 3e-34
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 145 8e-34
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 142 1e-32
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 140 3e-32
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 139 7e-32
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 137 2e-31
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 136 5e-31
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 130 2e-29
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 127 3e-28
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 126 5e-28
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 120 4e-26
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 116 7e-25
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 111 1e-23
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 110 3e-23
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 110 4e-23
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 109 5e-23
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 109 8e-23
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 108 1e-22
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 107 3e-22
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 103 4e-21
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 101 1e-20
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 101 2e-20
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 99 5e-20
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 100 7e-20
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 97 5e-19
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 96 6e-19
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 95 1e-18
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 95 1e-18
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 95 1e-18
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 95 2e-18
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 93 4e-18
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 93 4e-18
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 93 8e-18
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 92 1e-17
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 92 1e-17
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 92 1e-17
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 91 2e-17
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 91 3e-17
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 90 4e-17
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 89 1e-16
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 86 7e-16
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 85 2e-15
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 84 3e-15
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 84 4e-15
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 82 1e-14
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 82 1e-14
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 81 3e-14
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 80 4e-14
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 80 6e-14
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 79 8e-14
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 79 1e-13
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 78 2e-13
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 77 4e-13
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 77 5e-13
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 76 7e-13
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 76 7e-13
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 76 7e-13
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 76 1e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 75 2e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 75 2e-12
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 74 3e-12
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 74 3e-12
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 74 4e-12
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 73 7e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 72 1e-11
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 72 2e-11
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 71 3e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 71 3e-11
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 71 4e-11
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 70 5e-11
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 69 1e-10
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 68 2e-10
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 68 3e-10
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 67 3e-10
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 67 3e-10
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 67 4e-10
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 67 4e-10
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 62 9e-09
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 61 2e-08
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 60 7e-08
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 59 9e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 9e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 8e-07
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 56 1e-06
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 51 2e-05
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 49 9e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 45 0.002
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 44 0.003
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 43 0.008
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 42 0.011
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 42 0.011
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 42 0.014
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 38 0.23
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 38 0.31
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 38 0.31
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 38 0.31
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.41
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.41
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 36 0.71
UniRef50_Q4U9E9 Cluster: Mannosyltransferase, putative; n=2; The... 36 0.94
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.2
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 36 1.2
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 35 1.6
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.2
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 33 5.0
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 6.6
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 173 bits (420), Expect = 5e-42
Identities = 85/146 (58%), Positives = 100/146 (68%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+I +++SLPVLAGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 176 AILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGF 235
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GIISH+I E GKKETFG + AYFTSAT+
Sbjct: 236 GIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMI 295
Query: 599 IAVPTGIKIFRXLATIHGTQINYTLI 676
IA+PTGIKIF +AT G ++ L+
Sbjct: 296 IAIPTGIKIFSWMATFSGVKLMNNLM 321
Score = 60.1 bits (139), Expect = 5e-08
Identities = 34/72 (47%), Positives = 39/72 (54%)
Frame = +3
Query: 27 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 206
G GTG TVYPPLS + H G SVDL IFSLHLAG SS + D+
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDK 164
Query: 207 LPLFV*AVGITA 242
+ LF +V ITA
Sbjct: 165 MSLFSWSVFITA 176
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 169 bits (410), Expect = 7e-41
Identities = 79/144 (54%), Positives = 99/144 (68%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
++ +++SLPVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 192 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 251
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G+ISHI++ GKKE FG + AYFTSAT+
Sbjct: 252 GMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMI 311
Query: 599 IAVPTGIKIFRXLATIHGTQINYT 670
IA+PTG+K+F LAT+HG+ + ++
Sbjct: 312 IAIPTGVKVFSWLATLHGSNMKWS 335
Score = 69.7 bits (163), Expect = 6e-11
Identities = 39/76 (51%), Positives = 45/76 (59%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 117 MVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAM 176
Query: 195 SFDQLPLFV*AVGITA 242
+ Q PLFV +V ITA
Sbjct: 177 TQYQTPLFVWSVLITA 192
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 169 bits (410), Expect = 7e-41
Identities = 80/143 (55%), Positives = 97/143 (67%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
++ +++SLPVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 192 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 251
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GIISH+++ GKKE FG + AYFTSAT+
Sbjct: 252 GIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMI 311
Query: 599 IAVPTGIKIFRXLATIHGTQINY 667
IA+PTG+K+F LAT+HG I +
Sbjct: 312 IAIPTGVKVFSWLATLHGGAIKW 334
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/75 (54%), Positives = 45/75 (60%)
Frame = +3
Query: 18 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 197
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 198 FDQLPLFV*AVGITA 242
Q PLFV AV +TA
Sbjct: 178 QYQTPLFVWAVLVTA 192
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 167 bits (407), Expect = 2e-40
Identities = 79/143 (55%), Positives = 97/143 (67%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
++ +++SLPVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 192 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 251
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G+ISH+++ GKKE FG + AYFTSAT+
Sbjct: 252 GMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMI 311
Query: 599 IAVPTGIKIFRXLATIHGTQINY 667
IA+PTG+K+F LAT+HG I +
Sbjct: 312 IAIPTGVKVFSWLATLHGGAIKW 334
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/75 (52%), Positives = 45/75 (60%)
Frame = +3
Query: 18 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 197
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 198 FDQLPLFV*AVGITA 242
Q PLFV +V +TA
Sbjct: 178 QYQTPLFVWSVLVTA 192
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 161 bits (390), Expect = 2e-38
Identities = 83/143 (58%), Positives = 94/143 (65%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+ +++SLPVLAGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 195 AFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 254
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GIISHI+S G K FG L AYFT+AT+
Sbjct: 255 GIISHIVSTFSG-KPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI 313
Query: 599 IAVPTGIKIFRXLATIHGTQINY 667
IAVPTGIKIF +AT+ G I Y
Sbjct: 314 IAVPTGIKIFSWIATMWGGSIQY 336
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 120 LVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGM 179
Query: 195 SFDQLPLFV*AVGITAF 245
+ +LPLFV +V +TAF
Sbjct: 180 TMHRLPLFVWSVLVTAF 196
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 161 bits (390), Expect = 2e-38
Identities = 81/144 (56%), Positives = 96/144 (66%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+I +++SLPVLAGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGF
Sbjct: 192 AILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGF 251
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G++SHI+S G K FG L AYFT+AT+
Sbjct: 252 GMVSHIVSAFSG-KPVFGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFTAATMI 310
Query: 599 IAVPTGIKIFRXLATIHGTQINYT 670
IAVPTGIKIF LAT++G + T
Sbjct: 311 IAVPTGIKIFSWLATLYGGSLRIT 334
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/75 (52%), Positives = 45/75 (60%)
Frame = +3
Query: 18 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 197
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 198 FDQLPLFV*AVGITA 242
+LPLFV A+ +TA
Sbjct: 178 LHKLPLFVWAIFVTA 192
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 148 bits (358), Expect = 1e-34
Identities = 75/136 (55%), Positives = 90/136 (66%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+ +++++PVLAGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 200 AFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGF 259
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G+ISHI+S +K FG + AYFT+AT+
Sbjct: 260 GMISHIVS-TFSRKPVFGYIGMVYAMVSIGVLGFIVWAHHMYTVGLDVDTRAYFTAATMI 318
Query: 599 IAVPTGIKIFRXLATI 646
IAVPTGIKIF +ATI
Sbjct: 319 IAVPTGIKIFSWIATI 334
Score = 66.9 bits (156), Expect = 4e-10
Identities = 36/77 (46%), Positives = 46/77 (59%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 125 LVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQ 184
Query: 195 SFDQLPLFV*AVGITAF 245
S ++PLFV ++ +TAF
Sbjct: 185 SMYRIPLFVWSILVTAF 201
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 147 bits (357), Expect = 2e-34
Identities = 74/144 (51%), Positives = 93/144 (64%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
++ +++SLPVLA AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGF
Sbjct: 219 AVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGF 278
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GIIS +IS K FG + AYFT+AT+
Sbjct: 279 GIISTVIS-ANSNKNVFGYLGMVYAMMSIGLLGFIVWSHHMYTVGLDVDTRAYFTAATLI 337
Query: 599 IAVPTGIKIFRXLATIHGTQINYT 670
IA+PTG+KIF LAT +G +++T
Sbjct: 338 IAIPTGVKIFSWLATCYGGSLHFT 361
Score = 59.3 bits (137), Expect = 9e-08
Identities = 34/76 (44%), Positives = 39/76 (51%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 144 IIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGI 203
Query: 195 SFDQLPLFV*AVGITA 242
+L LF AV ITA
Sbjct: 204 KLHKLALFGWAVVITA 219
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 147 bits (356), Expect = 3e-34
Identities = 75/143 (52%), Positives = 91/143 (63%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
++ +++SLPVLAG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGF
Sbjct: 193 AVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGF 252
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GIIS IS K FG + AYFT+AT+
Sbjct: 253 GIISTTIS-ANSNKSVFGYLGMVYAMCSIGILGFVVWSHHMYTVGLDVDTRAYFTAATLI 311
Query: 599 IAVPTGIKIFRXLATIHGTQINY 667
IAVPTGIKIF LAT +G +++
Sbjct: 312 IAVPTGIKIFSWLATCYGGSLHF 334
Score = 62.9 bits (146), Expect = 7e-09
Identities = 36/75 (48%), Positives = 41/75 (54%)
Frame = +3
Query: 18 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 197
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIR 178
Query: 198 FDQLPLFV*AVGITA 242
+L LF AV ITA
Sbjct: 179 LHKLILFAWAVVITA 193
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 146 bits (355), Expect = 3e-34
Identities = 74/149 (49%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S +I+++PVLA AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGF
Sbjct: 196 SFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGF 255
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G++SHII+ KK FG + +AYFT+AT+
Sbjct: 256 GLVSHIIA-TFSKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFTAATMV 314
Query: 599 IAVPTGIKIFRXLATIHGTQI-NYTLIFY 682
IA+PTGIK+F +AT+ G I YT +++
Sbjct: 315 IAIPTGIKVFNWIATMWGGSIWMYTPMYF 343
Score = 62.5 bits (145), Expect = 9e-09
Identities = 35/75 (46%), Positives = 39/75 (52%)
Frame = +3
Query: 21 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 200
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFN 182
Query: 201 DQLPLFV*AVGITAF 245
LPLFV +V +T+F
Sbjct: 183 KDLPLFVWSVAVTSF 197
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 145 bits (352), Expect = 8e-34
Identities = 75/141 (53%), Positives = 88/141 (62%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+ +++SLPVL+ IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGF
Sbjct: 193 AFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGF 252
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GI+SHI+S KK FG L AYFTSAT+
Sbjct: 253 GIVSHIVS-TYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMI 311
Query: 599 IAVPTGIKIFRXLATIHGTQI 661
IA+PTGIKIF LATI+G I
Sbjct: 312 IAIPTGIKIFSWLATIYGGSI 332
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/77 (54%), Positives = 47/77 (61%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 195 SFDQLPLFV*AVGITAF 245
S ++PLFV A+ ITAF
Sbjct: 178 SMHKMPLFVWAIFITAF 194
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 142 bits (343), Expect = 1e-32
Identities = 72/140 (51%), Positives = 90/140 (64%)
Frame = +2
Query: 248 IIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 427
+++SLPVLAGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+I
Sbjct: 301 LLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVI 360
Query: 428 SHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATISIAV 607
SHI++ KK FG + +AYF AT+ IAV
Sbjct: 361 SHIVA-TFSKKPIFGYLPMVYALVAIGGLGFVVWAHHMYTVGMTLTQQAYFMVATMVIAV 419
Query: 608 PTGIKIFRXLATIHGTQINY 667
PTGIKIF +AT+ I++
Sbjct: 420 PTGIKIFSWIATMWMGSISF 439
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGM 282
Query: 195 SFDQLPLFV*AVGITAF 245
+ ++PLF +V +TA+
Sbjct: 283 TLHKVPLFAWSVFVTAW 299
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 140 bits (339), Expect = 3e-32
Identities = 69/138 (50%), Positives = 85/138 (61%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
SI ++ S+PVLA +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP F
Sbjct: 195 SILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAF 254
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G+ISHI+ + K FG L AYFT+AT+
Sbjct: 255 GVISHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVWGHHMFVAGLDIDTRAYFTAATLM 314
Query: 599 IAVPTGIKIFRXLATIHG 652
IAVPTG+K+F LATI G
Sbjct: 315 IAVPTGVKVFNWLATIFG 332
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 27 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 137
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 139 bits (336), Expect = 7e-32
Identities = 72/143 (50%), Positives = 90/143 (62%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+ ++++LPVLA AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGF
Sbjct: 235 AFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGF 294
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GIIS I+S +K FG + + YFT+AT+
Sbjct: 295 GIISQIVS-TFSRKPVFGYLGMAYAMVAIGVVGFVVWAHHMFTTGMSVNVKMYFTAATMV 353
Query: 599 IAVPTGIKIFRXLATIHGTQINY 667
IAVPTGIKIF +ATI G I++
Sbjct: 354 IAVPTGIKIFSWIATIWGGSISF 376
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/74 (43%), Positives = 42/74 (56%)
Frame = +3
Query: 24 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 203
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 204 QLPLFV*AVGITAF 245
++PLFV +V +TAF
Sbjct: 223 KMPLFVWSVLVTAF 236
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 137 bits (332), Expect = 2e-31
Identities = 70/133 (52%), Positives = 84/133 (63%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+ +++SLPVL+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGF
Sbjct: 193 AFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGF 252
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GIISH++S KK FG L AYFTSAT+
Sbjct: 253 GIISHVVS-TYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMI 311
Query: 599 IAVPTGIKIFRXL 637
IA+PTGIKIF L
Sbjct: 312 IAIPTGIKIFSWL 324
Score = 72.5 bits (170), Expect = 9e-12
Identities = 40/77 (51%), Positives = 47/77 (61%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 195 SFDQLPLFV*AVGITAF 245
+ +LPLFV ++ ITAF
Sbjct: 178 TMHKLPLFVWSIFITAF 194
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 136 bits (329), Expect = 5e-31
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
++ +++SLPVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 193 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 252
Query: 419 GIISHIISQERGKKETFG 472
G+ISH+++ GKKE FG
Sbjct: 253 GMISHVVTYYAGKKEPFG 270
Score = 75.4 bits (177), Expect = 1e-12
Identities = 43/75 (57%), Positives = 46/75 (61%)
Frame = +3
Query: 18 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 197
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 198 FDQLPLFV*AVGITA 242
Q PLFV +V ITA
Sbjct: 179 QYQTPLFVWSVLITA 193
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 130 bits (315), Expect = 2e-29
Identities = 66/144 (45%), Positives = 87/144 (60%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
++ II++LPVLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P F
Sbjct: 210 AVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVF 269
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G++S I+ Q KK FG AYF+ A++
Sbjct: 270 GVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADSRAYFSGASLI 328
Query: 599 IAVPTGIKIFRXLATIHGTQINYT 670
IA+PTG KIF LATI+G + +T
Sbjct: 329 IAIPTGSKIFSWLATIYGGTLRWT 352
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 195 SFDQLPLFV*AVGITA 242
+ +LPLFV +V ITA
Sbjct: 195 DYSKLPLFVWSVLITA 210
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 127 bits (306), Expect = 3e-28
Identities = 62/133 (46%), Positives = 79/133 (59%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S+ +++SLPVLA IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGF
Sbjct: 282 SVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGF 341
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GI+SHI +FG + +F+S T+
Sbjct: 342 GIVSHICMSLSNNDSSFGYYGLICAMASIVCLGSVVWGHHMFMVGFDSLTGVFFSSITMI 401
Query: 599 IAVPTGIKIFRXL 637
I VPTGIK+F L
Sbjct: 402 IGVPTGIKVFSWL 414
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 27 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 137
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 126 bits (304), Expect = 5e-28
Identities = 63/127 (49%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
Frame = +2
Query: 305 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXX 484
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E FG
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 485 XXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATISIAVPTGIKIFRXLATIHGTQIN 664
L AYFT+AT+ IAVPTGIK+F +AT+ G+ +
Sbjct: 251 VYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQ 310
Query: 665 Y-TLIFY 682
+ T +F+
Sbjct: 311 WETPLFW 317
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 120 bits (288), Expect = 4e-26
Identities = 61/132 (46%), Positives = 76/132 (57%)
Frame = +2
Query: 248 IIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 427
++++LPVL G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+I
Sbjct: 201 LLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVI 260
Query: 428 SHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATISIAV 607
SH+IS + FG L AYFTS TI I++
Sbjct: 261 SHVISTNY-CRNLFGNQSMILAMGCIAVLGSLVWVHHMYTTGLEVDTRAYFTSTTILISI 319
Query: 608 PTGIKIFRXLAT 643
PTG K+F + T
Sbjct: 320 PTGTKVFNWICT 331
Score = 36.7 bits (81), Expect = 0.54
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 21 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 137
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 116 bits (278), Expect = 7e-25
Identities = 58/139 (41%), Positives = 77/139 (55%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S +++S+PVLAG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP F
Sbjct: 202 SFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVF 261
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GIIS + K FG YF++AT+
Sbjct: 262 GIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSVWGHHMYTAGLDIDTRTYFSAATMI 321
Query: 599 IAVPTGIKIFRXLATIHGT 655
IA+P+ +KIF L T G+
Sbjct: 322 IAIPSAVKIFNWLGTFFGS 340
Score = 33.1 bits (72), Expect = 6.6
Identities = 22/76 (28%), Positives = 30/76 (39%)
Frame = +3
Query: 18 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 197
+ G G+ T YPPLS S+D I LH GI S +
Sbjct: 129 IGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVT 187
Query: 198 FDQLPLFV*AVGITAF 245
DQ+ +FV +T+F
Sbjct: 188 LDQISMFVWTSYLTSF 203
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 111 bits (268), Expect = 1e-23
Identities = 58/136 (42%), Positives = 76/136 (55%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S +++SLPV+ ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGF
Sbjct: 198 SFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGF 257
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GIIS ++S KE FG L + YFT+ TI
Sbjct: 258 GIISLLLSTYT-TKEMFGNQTMILAMGFNSFVRLFGLGTSYVHIRFGSRYSRYFTTVTIL 316
Query: 599 IAVPTGIKIFRXLATI 646
IA+PTG KIF + T+
Sbjct: 317 IALPTGNKIFNWVTTL 332
Score = 40.7 bits (91), Expect = 0.033
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 18 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 137
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 110 bits (265), Expect = 3e-23
Identities = 61/143 (42%), Positives = 81/143 (56%)
Frame = +2
Query: 218 CMSCRDYSIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 397
C S S+ +++SLPVLA IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY
Sbjct: 169 CWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVY 228
Query: 398 ILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAY 577
++ILP FG+ S I Q G + +Y
Sbjct: 229 VVILPVFGLFSSSI-QLSSLHRIPGELSLVLAMASIALIGSVVWAHHMYTAGLDIDTRSY 287
Query: 578 FTSATISIAVPTGIKIFRXLATI 646
FT+AT+ IAVPTGIKIF L+++
Sbjct: 288 FTAATMIIAVPTGIKIFTWLSSL 310
Score = 36.7 bits (81), Expect = 0.54
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 30 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 137
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 487 LCYTSNWVLGFIV*AHHIFTVGIAIDTRGIF 579
L S ++G +V AHH++T G+ IDTR F
Sbjct: 258 LAMASIALIGSVVWAHHMYTAGLDIDTRSYF 288
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 110 bits (264), Expect = 4e-23
Identities = 47/70 (67%), Positives = 52/70 (74%)
Frame = +1
Query: 304 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 483
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 484 NLCYTSNWVL 513
NLCY SNW++
Sbjct: 67 NLCYISNWII 76
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 566 HEAYFTSATISIAVPTGIKIFRXLATIHGTQINYT 670
+ YFTSAT+ IAVPTGIKIF LAT HGTQINY+
Sbjct: 94 YSTYFTSATMIIAVPTGIKIFSWLATFHGTQINYS 128
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 109 bits (263), Expect = 5e-23
Identities = 61/156 (39%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Frame = +2
Query: 218 CMSCRDYSIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 397
C + S I++S PVLA A+ +L D TSFF+P GGGDP++YQHLF F+ HP VY
Sbjct: 196 CWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVY 255
Query: 398 ILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAY 577
I+ILP FG+IS +I +K FG L+ +
Sbjct: 256 IMILPFFGVISEVI-PVHARKPIFGYRAIAYSSLAISFLGLIVWAHHMFTSGTPGWLRMF 314
Query: 578 FTSATISIAVPTGIKIFRXLATIHG--TQINYTLIF 679
F + T+ IAVPTGIKIF T+ G Q+N ++F
Sbjct: 315 FMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLF 350
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 109 bits (261), Expect = 8e-23
Identities = 58/148 (39%), Positives = 81/148 (54%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+I +II+LPVLAG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP F
Sbjct: 195 AILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVF 254
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G+IS I+ + G + F + AYF +I
Sbjct: 255 GLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVWAHHMFVVGMDVDSRAYFGGVSIL 313
Query: 599 IAVPTGIKIFRXLATIHGTQINYTLIFY 682
I +PT +K+F + + T + T Y
Sbjct: 314 IGLPTCVKLFNWIYSFLYTDMIITFEVY 341
Score = 40.3 bits (90), Expect = 0.044
Identities = 26/78 (33%), Positives = 33/78 (42%)
Frame = +3
Query: 9 GRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXX 188
G + E G G G T+YP L H + D +F++HL GISS
Sbjct: 118 GFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRK 177
Query: 189 XXSFDQLPLFV*AVGITA 242
SF LF+ A ITA
Sbjct: 178 FFSFLSWSLFIWAALITA 195
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 108 bits (260), Expect = 1e-22
Identities = 48/56 (85%), Positives = 54/56 (96%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 406
++ +++SLPVLAGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 165 ALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
Score = 96.7 bits (230), Expect = 5e-19
Identities = 51/76 (67%), Positives = 53/76 (69%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 90 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKM 149
Query: 195 SFDQLPLFV*AVGITA 242
SFDQ+PLF+ AVGITA
Sbjct: 150 SFDQMPLFIWAVGITA 165
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 107 bits (256), Expect = 3e-22
Identities = 48/78 (61%), Positives = 62/78 (79%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
++ II++LPVLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P F
Sbjct: 210 AVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVF 269
Query: 419 GIISHIISQERGKKETFG 472
G++S I+ Q KK FG
Sbjct: 270 GVVSQIV-QVYAKKPIFG 286
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 195 SFDQLPLFV*AVGITA 242
+ +LPLFV +V ITA
Sbjct: 195 DYSKLPLFVWSVLITA 210
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 103 bits (247), Expect = 4e-21
Identities = 55/143 (38%), Positives = 77/143 (53%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+I II++LP L A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGF
Sbjct: 211 AILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGF 270
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G+IS +I +K +G + +F ++
Sbjct: 271 GMISEVI-PVFSRKPIYGYTFVAASSVAIVLLGYGVWAHHMFAVGLGMYADIFFAVGSLL 329
Query: 599 IAVPTGIKIFRXLATIHGTQINY 667
IA+PTGIK+F AT+ G +I +
Sbjct: 330 IAIPTGIKVFNWTATLWGGEIQF 352
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 101 bits (243), Expect = 1e-20
Identities = 54/144 (37%), Positives = 74/144 (51%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S I+ + P L + +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP F
Sbjct: 201 SALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAF 260
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GI S +I +K FG + A F AT++
Sbjct: 261 GIFSEVI-PVFARKRLFGYSSMVFAIVLIGFLGFMVWVHHMFTTGLGPIANAIFAVATMA 319
Query: 599 IAVPTGIKIFRXLATIHGTQINYT 670
IA+PTGIKIF L TI G + YT
Sbjct: 320 IAIPTGIKIFNWLLTIWGGNVKYT 343
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 101 bits (241), Expect = 2e-20
Identities = 59/144 (40%), Positives = 74/144 (51%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+ +I + PVL A LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP
Sbjct: 210 AFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTM 269
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GIIS ++ +K FG L A+F +A+
Sbjct: 270 GIISEVL-PTFSRKPIFGYAFVAYSGVAIGFLGFLVWAHHMFAVGLGPLANAFFGAASFL 328
Query: 599 IAVPTGIKIFRXLATIHGTQINYT 670
IAVPTG+KIF LAT+ +N T
Sbjct: 329 IAVPTGVKIFNWLATMWQGSLNLT 352
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 99 bits (238), Expect = 5e-20
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +2
Query: 281 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 457
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 53.2 bits (122), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 4/45 (8%)
Frame = +3
Query: 15 IVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 137
I+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 146 IIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +2
Query: 572 AYFTSATISIAVPTGIKIFRXLATIHGTQINYT 670
AYFT+AT+ IAVPTGIKIF LAT +G I T
Sbjct: 362 AYFTAATLIIAVPTGIKIFSWLATCYGGSIKMT 394
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 99.5 bits (237), Expect = 7e-20
Identities = 53/77 (68%), Positives = 54/77 (70%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 114 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNL 173
Query: 195 SFDQLPLFV*AVGITAF 245
SFDQ+PLFV AVGITAF
Sbjct: 174 SFDQMPLFVWAVGITAF 190
Score = 97.5 bits (232), Expect = 3e-19
Identities = 42/52 (80%), Positives = 49/52 (94%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 394
+ +++SLPVLAGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 189 AFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 96.7 bits (230), Expect = 5e-19
Identities = 51/136 (37%), Positives = 77/136 (56%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S +I+++P + A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP
Sbjct: 208 SFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAV 267
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G++S I++ ++ FG E++FT+++++
Sbjct: 268 GMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWVHHMFVAGLPRLGESFFTASSMA 326
Query: 599 IAVPTGIKIFRXLATI 646
IAVP G++IF LATI
Sbjct: 327 IAVPAGLQIFCWLATI 342
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 96.3 bits (229), Expect = 6e-19
Identities = 49/143 (34%), Positives = 75/143 (52%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
++ ++ +P LAGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP F
Sbjct: 148 NVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVF 207
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G S II ++ FG F+ T+
Sbjct: 208 GFYSEII-PVFARRPLFGYTSMVFAVWAITAVSFFLWIHHMFVSGVPNWTRVLFSYTTLL 266
Query: 599 IAVPTGIKIFRXLATIHGTQINY 667
IAVPTGIKIF + T++ I++
Sbjct: 267 IAVPTGIKIFNWMLTLYRGAIHF 289
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 95.5 bits (227), Expect = 1e-18
Identities = 54/144 (37%), Positives = 72/144 (50%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S II + P + A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILILP
Sbjct: 212 SAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAM 271
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GIIS +I +K FG + F+ T++
Sbjct: 272 GIISEVI-PVHARKMLFGYSVMVFSTALIGFMGFTVWSHHMFTVGMGPVVNSIFSLTTMA 330
Query: 599 IAVPTGIKIFRXLATIHGTQINYT 670
IAVPTG+KIF L+T+ G QI +T
Sbjct: 331 IAVPTGVKIFNWLSTMWGGQIRFT 354
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 95.5 bits (227), Expect = 1e-18
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 5/146 (3%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYIL 403
S+ ++ +LP LA +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL
Sbjct: 197 SMLMVTALPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYIL 256
Query: 404 ILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFT 583
+LP G++S +I Q ++ +G
Sbjct: 257 VLPAMGLVSEVI-QRMARRRAYGYTAIAISSVAIASISFAVWMHHMFTAVQDFAPRVAMA 315
Query: 584 SATISIAVPTGIKIFRXLATIHGTQI 661
AT+++A+P+G+K+F +AT++G +I
Sbjct: 316 IATMAVAIPSGVKVFNWVATLYGGRI 341
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 95.1 bits (226), Expect = 1e-18
Identities = 49/132 (37%), Positives = 65/132 (49%)
Frame = +2
Query: 251 IISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 430
+I LP L G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S
Sbjct: 222 LIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFS 281
Query: 431 HIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATISIAVP 610
+ +K FG L+ F T+ IA+P
Sbjct: 282 ELF-PVYARKPLFGYRFVAIASFGITFLSLIVWAHHMFYTGTPNWMRHIFMFTTMLIAIP 340
Query: 611 TGIKIFRXLATI 646
TG+K+F L T+
Sbjct: 341 TGVKVFAWLGTL 352
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 94.7 bits (225), Expect = 2e-18
Identities = 54/135 (40%), Positives = 74/135 (54%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
SI +I SLP+L AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP F
Sbjct: 204 SILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVF 261
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G+ S I++ K+ FG +YF+ AT
Sbjct: 262 GLTSLILTSII-HKDIFGREGMMYCIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIATSI 320
Query: 599 IAVPTGIKIFRXLAT 643
I++PT +K+F + T
Sbjct: 321 ISIPTSVKMFSYINT 335
Score = 33.5 bits (73), Expect = 5.0
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 36 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 137
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 93.5 bits (222), Expect = 4e-18
Identities = 50/94 (53%), Positives = 55/94 (58%)
Frame = +2
Query: 389 EVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXH 568
EVYILILPGFG+ISHIISQE GKKE FG +
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 569 EAYFTSATISIAVPTGIKIFRXLATIHGTQINYT 670
AYFTSAT+ IAVPTGIK+F LAT HGTQI Y+
Sbjct: 215 RAYFTSATMIIAVPTGIKVFSWLATFHGTQILYS 248
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 93.5 bits (222), Expect = 4e-18
Identities = 46/98 (46%), Positives = 56/98 (57%)
Frame = +2
Query: 374 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXX 553
FFGHPEVYILILPGFG+ISHI++ GKKE FG +
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 554 XXXXHEAYFTSATISIAVPTGIKIFRXLATIHGTQINY 667
AYFTSAT+ IA+PTG+K+F LAT+HG I +
Sbjct: 62 MDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKW 99
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 92.7 bits (220), Expect = 8e-18
Identities = 50/148 (33%), Positives = 77/148 (52%)
Frame = +2
Query: 224 SCRDYSIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 403
+C ++ I S P+L GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL
Sbjct: 232 TCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYIL 291
Query: 404 ILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFT 583
+LP FGI S ++S GK+ FG + A+F
Sbjct: 292 VLPAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGFMVWLHHFFTMGSGANVNAFFG 350
Query: 584 SATISIAVPTGIKIFRXLATIHGTQINY 667
AT+ I++PTG+K+F L TI+ ++ +
Sbjct: 351 IATMIISIPTGVKLFNWLFTIYKGRLRF 378
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 92.3 bits (219), Expect = 1e-17
Identities = 50/143 (34%), Positives = 75/143 (52%)
Frame = +2
Query: 242 IFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 421
+ I+ + PVL A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FG
Sbjct: 233 VIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFG 292
Query: 422 IISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATISI 601
I S IIS +K+ FG L ++F+ T++I
Sbjct: 293 IFSEIIS-SFARKQLFGYKAMVGSIIAISVLSFLVWTHHFFTMGNSASVNSFFSITTMAI 351
Query: 602 AVPTGIKIFRXLATIHGTQINYT 670
++PTG+KIF L T++ +I++T
Sbjct: 352 SIPTGVKIFNWLFTMYKGRISFT 374
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 91.9 bits (218), Expect = 1e-17
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 385
+I +++SLPVLAGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 111 AILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 72.9 bits (171), Expect = 7e-12
Identities = 40/75 (53%), Positives = 46/75 (61%)
Frame = +3
Query: 18 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 197
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 198 FDQLPLFV*AVGITA 242
++PLFV AV ITA
Sbjct: 97 PXRMPLFVWAVEITA 111
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 91.9 bits (218), Expect = 1e-17
Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+I +II++P L + +R T FFD A GG P+L+Q LF FFGHPEVYILILP
Sbjct: 190 AILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAM 249
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSA-TI 595
G++S ++ + ++E FG L +SA T+
Sbjct: 250 GLVSELL-PKMARREIFGYTAIALSSIAIAFLSALGVWMHHMFTAIDNTLVQIVSSATTM 308
Query: 596 SIAVPTGIKIFRXLATIHGTQINY 667
+IA+P+G+K+ AT++G +I Y
Sbjct: 309 AIAIPSGVKVLNWTATLYGGEIRY 332
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 91.1 bits (216), Expect = 2e-17
Identities = 53/141 (37%), Positives = 73/141 (51%)
Frame = +2
Query: 248 IIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 427
I+ + P+L AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GII
Sbjct: 282 ILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGII 339
Query: 428 SHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATISIAV 607
S+I+ + G++ FG A F + +++IAV
Sbjct: 340 SYILPRFSGRR-LFGFKFVVYSTLAIGVLSFGVWAHHMFATGLDPRLRASFMAVSLAIAV 398
Query: 608 PTGIKIFRXLATIHGTQINYT 670
P+ +K F + T+ I T
Sbjct: 399 PSAVKTFNWITTMWNGNIRLT 419
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 90.6 bits (215), Expect = 3e-17
Identities = 49/149 (32%), Positives = 75/149 (50%)
Frame = +2
Query: 224 SCRDYSIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 403
+C ++ I+ S P+L A+ +L DR L+ F GG+P++Y +LF +GHPEVYIL
Sbjct: 231 TCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYIL 290
Query: 404 ILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFT 583
ILP FG+ S + S GK+ FG +F
Sbjct: 291 ILPAFGVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASVNTFFG 349
Query: 584 SATISIAVPTGIKIFRXLATIHGTQINYT 670
AT+ I++PTG+K+F L TI+ ++ +T
Sbjct: 350 LATMLISIPTGVKLFNWLFTIYQGRLRFT 378
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 90.2 bits (214), Expect = 4e-17
Identities = 47/141 (33%), Positives = 74/141 (52%)
Frame = +2
Query: 248 IIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 427
I+ + P+ A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+
Sbjct: 250 ILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIV 308
Query: 428 SHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATISIAV 607
S I+ + G+K FG + F + +++I++
Sbjct: 309 SLILPKFSGRK-LFGFKFVVYSTLAIGVLSFGVWAHHMFTTGIDPRIRSSFMAVSLAISI 367
Query: 608 PTGIKIFRXLATIHGTQINYT 670
P+ +K+F + T+ ++ T
Sbjct: 368 PSAVKVFNWITTMWNGKLRLT 388
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 89.0 bits (211), Expect = 1e-16
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHP 388
++ +++ P L +LL DR L TSFF P GGG P+L+QHLF FFGHP
Sbjct: 222 TVMALLAFPALFVGSVMLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHP 281
Query: 389 EVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXH 568
EVYI+ LP FGI+S +IS +K FG +
Sbjct: 282 EVYIVALPAFGIVSDLIS-THARKNIFGYRMMVWAIVAIGALSFVVWAHHMYVSGMYPYF 340
Query: 569 EAYFTSATISIAVPTGIKIFRXLATIHGTQINYTL 673
+F + T+ IA+PT IK++ + T+ I+ T+
Sbjct: 341 GFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTV 375
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 86.2 bits (204), Expect = 7e-16
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 382
+I +++SLPVLAGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 193 AILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/76 (51%), Positives = 47/76 (61%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 118 LVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGM 177
Query: 195 SFDQLPLFV*AVGITA 242
+ ++PLFV +V ITA
Sbjct: 178 TMSRIPLFVWSVLITA 193
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2
Query: 572 AYFTSATISIAVPTGIKIFRXLATIHGTQINYTLIF 679
AYFT+AT+ IAVPTGIKIF LAT+ G+ N LIF
Sbjct: 268 AYFTAATMIIAVPTGIKIFSWLATVSGSGRN--LIF 301
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 466 FWLFRNNLCYTSNWVLGFIV*AHHIFTVGIAIDTRGIF 579
FW F L VLGFIV A H++ VG+ +DTR F
Sbjct: 236 FWFFGAMLAIG---VLGFIVWADHMYVVGMDVDTRAYF 270
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 85.0 bits (201), Expect = 2e-15
Identities = 37/44 (84%), Positives = 42/44 (95%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 370
+I +++SLPVLAGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 175 AILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 72.9 bits (171), Expect = 7e-12
Identities = 40/75 (53%), Positives = 45/75 (60%)
Frame = +3
Query: 18 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 197
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMK 160
Query: 198 FDQLPLFV*AVGITA 242
+ + LFV +V ITA
Sbjct: 161 IELVSLFVWSVKITA 175
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 84.2 bits (199), Expect = 3e-15
Identities = 51/153 (33%), Positives = 73/153 (47%)
Frame = +2
Query: 224 SCRDYSIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 403
+C +I I+IS P+L + + DR L+T F+ GG +LY +L +GHPEVYIL
Sbjct: 226 TCLCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYIL 285
Query: 404 ILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFT 583
ILP FGI S IIS K F L +F+
Sbjct: 286 ILPSFGIFSEIISYIC-VKSVFSYISLIYATISITVLSFLVWLHHFFTMGSGYLSNIFFS 344
Query: 584 SATISIAVPTGIKIFRXLATIHGTQINYTLIFY 682
+T+ IA+PTG+KIF + TI + ++F+
Sbjct: 345 ISTMIIAIPTGVKIFNWIFTILFSNFKKDILFF 377
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 83.8 bits (198), Expect = 4e-15
Identities = 36/44 (81%), Positives = 42/44 (95%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 370
+I +++SLPVLAGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 192 AILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/75 (52%), Positives = 45/75 (60%)
Frame = +3
Query: 18 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 197
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 198 FDQLPLFV*AVGITA 242
+LPLFV A+ +TA
Sbjct: 178 LHKLPLFVWAIFVTA 192
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 81.8 bits (193), Expect = 1e-14
Identities = 48/140 (34%), Positives = 70/140 (50%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S I+ +LP L A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P
Sbjct: 215 SFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPAL 273
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G++S II ++ FG +FT+++
Sbjct: 274 GMVSSIIITFT-QRPIFGYIPIVLSIVAIGFIGFGLWVHHMFTAGLPQLGSNFFTASSAM 332
Query: 599 IAVPTGIKIFRXLATIHGTQ 658
IA+P+G++IF +AT+ G++
Sbjct: 333 IAIPSGVQIFCWIATLWGSK 352
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 81.8 bits (193), Expect = 1e-14
Identities = 44/148 (29%), Positives = 70/148 (47%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S+ + SL L A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP
Sbjct: 202 SVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYL 261
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GI++ + S +K FG + + F T
Sbjct: 262 GILAEVAS-TFARKPLFGYRQMVWAQMGIVVLGTMVWAHHMFTVGESTLFQIAFAFFTAL 320
Query: 599 IAVPTGIKIFRXLATIHGTQINYTLIFY 682
IAVPTG+K+F + T+ G ++ Y
Sbjct: 321 IAVPTGVKLFNIIGTLWGGKLQMKTPLY 348
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 80.6 bits (190), Expect = 3e-14
Identities = 42/146 (28%), Positives = 73/146 (50%)
Frame = +2
Query: 236 YSIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 415
++ I+I+ P + A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP
Sbjct: 217 FAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPA 276
Query: 416 FGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATI 595
G++S I+ + G +F++A++
Sbjct: 277 AGLVSMIV-PTMARHPLVGYRLIVVALIGTGFFSFGLWVHHMFTTGIPSLSLGFFSAASM 335
Query: 596 SIAVPTGIKIFRXLATIHGTQINYTL 673
++A+P+GI++F +ATI ++ + +
Sbjct: 336 AVAIPSGIQVFSWIATIASSKERFRI 361
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 80.2 bits (189), Expect = 4e-14
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +2
Query: 263 PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 442
PVL A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+
Sbjct: 361 PVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVP 420
Query: 443 QERGKK 460
++
Sbjct: 421 HNNTRR 426
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 79.8 bits (188), Expect = 6e-14
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Frame = +2
Query: 257 SLPVLAGAITILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FFGHPEVYIL 403
+LPVL A ++L DR + T FF P AGGG P+L+QHLF F+ HP VYI+
Sbjct: 236 ALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYIM 295
Query: 404 ILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFT 583
ILP G++S I++ +K FG + F
Sbjct: 296 ILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAGLGFIVWGHHMFVSGMNPGLGMTFM 354
Query: 584 SATISIAVPTGIKIFRXLATIHGTQINYT 670
AT+ IA+P+ +K F L T++G ++ +T
Sbjct: 355 VATMMIALPSAVKTFNWLGTVYGGKVQFT 383
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 79.4 bits (187), Expect = 8e-14
Identities = 48/136 (35%), Positives = 66/136 (48%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S+ ++ P+L A +L DR L +DPA GG +L+QHLF FFGHPEVY+L LP F
Sbjct: 218 SVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFF 276
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GI+S II +K FG + +F+ T
Sbjct: 277 GIVSEII-PVFSRKPMFGYVGLIFATLSIGALSMAVWAHHMFVTGAVLL--PFFSFMTFL 333
Query: 599 IAVPTGIKIFRXLATI 646
I+VPTG+K F + T+
Sbjct: 334 ISVPTGVKFFNWVGTM 349
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 78.6 bits (185), Expect = 1e-13
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Frame = +2
Query: 251 IISLPVLAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 427
+++ PV+ G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++
Sbjct: 222 VLATPVI-GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVM 280
Query: 428 SHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATISIAV 607
S +++ +K FG F T+ + V
Sbjct: 281 SEVVA-TYSRKNIFGYRAVAYSSLGIAFVGFFAWGHHMFVSGQSTFAGGLFGVLTMIVGV 339
Query: 608 PTGIKIFRXLATIHGTQINYTLIF 679
T IK+F + T++ + + F
Sbjct: 340 FTAIKVFNWVGTVYKGAVEFKTPF 363
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 77.8 bits (183), Expect = 2e-13
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHP 388
+I ++S PVL A +L+ DR+L TSFF AG GG P+L+QHLF F GHP
Sbjct: 244 AIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHP 303
Query: 389 EVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXH 568
EVYI+++P GI S +I+ +K FG +
Sbjct: 304 EVYIVLIPALGITSEVIA-TNARKPIFGYKAMIGSILGIAVLSFIVWAHHMFVTGMNPFL 362
Query: 569 EAYFTSATISIAVPTGIKIFRXLATIHGTQINYT 670
+ F T+ IAVP+ +K F + T+ I +T
Sbjct: 363 GSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFT 396
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 77.0 bits (181), Expect = 4e-13
Identities = 32/67 (47%), Positives = 48/67 (71%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S+ ++++LP A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P
Sbjct: 194 SLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAI 253
Query: 419 GIISHII 439
G++ ++
Sbjct: 254 GMMYEMV 260
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 76.6 bits (180), Expect = 5e-13
Identities = 45/136 (33%), Positives = 66/136 (48%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+ I I+ P L +L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP
Sbjct: 234 AFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAA 293
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G+++ ++ G K FG + F++A+
Sbjct: 294 GMVATMLPTFVG-KPLFGYGFAVAAVVTMSFLSFGLWAHHMFATGLPILSLSLFSAASTM 352
Query: 599 IAVPTGIKIFRXLATI 646
+AVPTG++IF +AT+
Sbjct: 353 VAVPTGVQIFCFIATL 368
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYIL 403
+I + +PVL A +LL DR+ T FF GGGDPIL+QHLF FGHPEVYI+
Sbjct: 225 AILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIM 284
Query: 404 ILPGFGIISHIIS 442
ILP +GI+ ++S
Sbjct: 285 ILPAWGILGDVLS 297
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 30 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 209
AG G T Y PLS+N+ G L + ++ + G+SS ++ +L
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRL 214
Query: 210 PLFV*AVGITA 242
PL + + +TA
Sbjct: 215 PLTIWGLWLTA 225
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 76.2 bits (179), Expect = 7e-13
Identities = 43/136 (31%), Positives = 65/136 (47%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+I + + P+L A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP F
Sbjct: 255 NIIALTAFPILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAF 314
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G IS II +K FG +F++AT+
Sbjct: 315 GFISEII-PTFAEKPLFGYATMVIATFAIGGISWGVWLHHFFTMGAGPGINIFFSTATML 373
Query: 599 IAVPTGIKIFRXLATI 646
+ +PTG+K+F T+
Sbjct: 374 VGIPTGVKVFNWALTL 389
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 76.2 bits (179), Expect = 7e-13
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 409
+ +++SLPVL+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 193 AFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
Score = 72.5 bits (170), Expect = 9e-12
Identities = 40/77 (51%), Positives = 47/77 (61%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 195 SFDQLPLFV*AVGITAF 245
+ +LPLFV ++ ITAF
Sbjct: 178 TMHKLPLFVWSIFITAF 194
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/57 (57%), Positives = 45/57 (78%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 409
+I +++SLPVLA +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 198 AILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
Score = 60.1 bits (139), Expect = 5e-08
Identities = 34/76 (44%), Positives = 42/76 (55%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 123 LVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGM 182
Query: 195 SFDQLPLFV*AVGITA 242
++ +PLF AV TA
Sbjct: 183 KYENVPLFAWAVLFTA 198
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/75 (56%), Positives = 45/75 (60%)
Frame = +3
Query: 18 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 197
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAIS 166
Query: 198 FDQLPLFV*AVGITA 242
Q PLFV AV ITA
Sbjct: 167 QYQTPLFVWAVLITA 181
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDP 331
++ +++SLPVLA IT+LLTDRNLNT+FFDP
Sbjct: 181 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 74.5 bits (175), Expect = 2e-12
Identities = 30/48 (62%), Positives = 41/48 (85%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 382
++ ++++LPVL+ +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 193 AVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/76 (50%), Positives = 46/76 (60%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGM 177
Query: 195 SFDQLPLFV*AVGITA 242
+ +LPLFV A+ ITA
Sbjct: 178 TMHKLPLFVWAILITA 193
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/136 (28%), Positives = 67/136 (49%)
Frame = +2
Query: 236 YSIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 415
+++ I+ + P + A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP
Sbjct: 276 FALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPA 335
Query: 416 FGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATI 595
G++S I+ + G ++F +A+
Sbjct: 336 AGMVSMIV-PTMARTPLVGYRFVVLALVGTAFLSFGLWVHHMFTTGIPQLSLSFFQAAST 394
Query: 596 SIAVPTGIKIFRXLAT 643
++A+P+G+++F +AT
Sbjct: 395 AVAIPSGMQVFAWIAT 410
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/59 (55%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 409
++ II++LPVLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 210 AVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 195 SFDQLPLFV*AVGITA 242
+ +LPLFV +V ITA
Sbjct: 195 DYSKLPLFVWSVLITA 210
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 73.7 bits (173), Expect = 4e-12
Identities = 39/147 (26%), Positives = 65/147 (44%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S+ I++ PVL ++ ++ + FDPA GGDP+L+QH F F+ HP VYI++LP
Sbjct: 211 SVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAM 270
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
+IS ++ +K FG + F ++
Sbjct: 271 AVISEVVC-AFSRKNIFGYKAVAYSSLGIAFVGFFTWGHHMFTSGQSAFNGGVFGVLSMF 329
Query: 599 IAVPTGIKIFRXLATIHGTQINYTLIF 679
+ + T IK+F AT++ I + F
Sbjct: 330 VGIFTAIKVFNWTATLYKGSIYFATPF 356
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 72.9 bits (171), Expect = 7e-12
Identities = 42/141 (29%), Positives = 65/141 (46%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
SI +++L L A + + L S F+P GG P+LYQ F F+ HP VY+++LP
Sbjct: 210 SILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYL 269
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
GI + + S +K FG + + F +T+
Sbjct: 270 GIGAEVAS-TMARKPLFGYRVMVYSMLAIVLVSCIVWLHHMFAVGIPEAWQIAFMISTLI 328
Query: 599 IAVPTGIKIFRXLATIHGTQI 661
+AVPTG+KIF + T+ G +I
Sbjct: 329 VAVPTGVKIFNLIGTLWGGRI 349
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 72.1 bits (169), Expect = 1e-11
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +1
Query: 361 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNW 507
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYW 50
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 71.7 bits (168), Expect = 2e-11
Identities = 46/145 (31%), Positives = 68/145 (46%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
+I +I ++P L L DR L+ FF GG+ + + ++F FGHPEVYILILP F
Sbjct: 256 AIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAF 315
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G+ S I S G K FG L A F A++
Sbjct: 316 GVYSEIFSTFSG-KVLFGYKSLVWATISIAFLSFLVWLHHFFTMGQSGHINAVFGIASML 374
Query: 599 IAVPTGIKIFRXLATIHGTQINYTL 673
I +PTG+KI+ + T+ +I +++
Sbjct: 375 IGIPTGVKIYDWMWTMLRGRIRFSV 399
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/133 (28%), Positives = 62/133 (46%)
Frame = +2
Query: 248 IIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 427
I+ + P L + +R + FFDP GGDP+L+QHLF FGHPEVYI+ LP +
Sbjct: 237 ILFAFPPLIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALA 296
Query: 428 SHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATISIAV 607
+ I+ ++ G +F++A+ ++ +
Sbjct: 297 AMIV-PTAARQPIVGYSWIVLSAVGTGFLSFGLWVHHMFTTGLPALSLGFFSAASEAVVI 355
Query: 608 PTGIKIFRXLATI 646
PTGI++F +AT+
Sbjct: 356 PTGIQLFAFVATL 368
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/75 (52%), Positives = 45/75 (60%)
Frame = +3
Query: 18 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 197
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 198 FDQLPLFV*AVGITA 242
+LPLFV A+ +TA
Sbjct: 178 LHKLPLFVWAIFVTA 192
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 70.5 bits (165), Expect = 4e-11
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
S+ ++++P ++ A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP
Sbjct: 228 SVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAM 287
Query: 419 GIISHIISQE-RGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATI 595
GI+S + R + ++ A+F +A++
Sbjct: 288 GIVSDALPTFCRRPLVAYEAVAVSTVATMLIGFEVWVHHMFATGIAPLAL--AFFGAASM 345
Query: 596 SIAVPTGIKIFRXLATI 646
I++P+ + +F +ATI
Sbjct: 346 LISIPSAVAVFAWIATI 362
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 70.1 bits (164), Expect = 5e-11
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +2
Query: 242 IFIIISLPVLAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
I ++ + P L +LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P
Sbjct: 202 ILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPAL 259
Query: 419 GIISHIISQERGK 457
G ++ +IS GK
Sbjct: 260 GAMADVISTFSGK 272
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 11/78 (14%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGH 385
S +++ VL A +L DR TSFF P+G GG +L+QHLF FFGH
Sbjct: 229 SCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGH 288
Query: 386 PEVYILILPGFGIISHII 439
PEVYI ILP GI+SHI+
Sbjct: 289 PEVYIAILPAMGIVSHIL 306
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = +2
Query: 251 IISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 430
+I +PVL A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++
Sbjct: 196 LIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVF 255
Query: 431 HIIS 442
I++
Sbjct: 256 EIVA 259
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 67.7 bits (158), Expect = 3e-10
Identities = 40/80 (50%), Positives = 44/80 (55%)
Frame = -1
Query: 253 NNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCA 74
N+K AV T TN G S I +R I+E PAKC+EKI STD P CA
Sbjct: 39 NSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACA 98
Query: 73 ILDESGG*TVHPVPAPFSTI 14
I SGG TVHPVP P STI
Sbjct: 99 IPLASGGYTVHPVPTPLSTI 118
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = -2
Query: 369 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDIIIKM 241
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS+ KM
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKM 42
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 67.3 bits (157), Expect = 3e-10
Identities = 41/128 (32%), Positives = 60/128 (46%)
Frame = +2
Query: 263 PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 442
P++ G+I + L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 217 PLILGSILLEL-ERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL- 274
Query: 443 QERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATISIAVPTGIK 622
+ E G A F++A+ +AVPT ++
Sbjct: 275 PVMARTELIGYRWVVAAAISLAVLSFGLWVHHMFTTGIPHMGLALFSAASTLVAVPTAVQ 334
Query: 623 IFRXLATI 646
+F + T+
Sbjct: 335 LFAWIGTL 342
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 67.3 bits (157), Expect = 3e-10
Identities = 40/136 (29%), Positives = 61/136 (44%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
++ I+ P L +L +R + FF A GGD +L+QHLF FGHPEVYI+ LP
Sbjct: 208 AVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAA 267
Query: 419 GIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEAYFTSATIS 598
G IS I+ + G A+F++A+
Sbjct: 268 GAISTIL-PVMARTGLLGYGWIVAAAVALGVLSFGLWVHHMFTTGIPHLGLAFFSAASTL 326
Query: 599 IAVPTGIKIFRXLATI 646
+AVPT +++F + T+
Sbjct: 327 VAVPTAVQLFIWIGTL 342
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 66.9 bits (156), Expect = 4e-10
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGH 385
+I +LPVL + + DR T FF P+G GG P+L+QHLF F+ H
Sbjct: 233 AILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQPLLWQHLFWFYSH 292
Query: 386 PEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXX 565
P VYI++LP G++S ++S +K FG +
Sbjct: 293 PAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASLGFIVWGHHMFTSGMNPA 351
Query: 566 HEAYFTSATISIAVPTGIKIFRXLATIHGTQINYTLI 676
F +T+ IA+P+ IK F ATI G ++ + +
Sbjct: 352 VGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTV 388
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 66.9 bits (156), Expect = 4e-10
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 418
++ II++LPVLA +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI
Sbjct: 210 AVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTS 266
Query: 419 GI 424
GI
Sbjct: 267 GI 268
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 194
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 195 SFDQLPLFV*AVGITA 242
+ +LPLFV +V ITA
Sbjct: 195 DYSKLPLFVWSVLITA 210
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2
Query: 251 IISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 409
I+SLP+LAG IT+LL+DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 29 ILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +2
Query: 572 AYFTSATISIAVPTGIKIFRXLATIHGTQINYT 670
AYFTSAT+ IAVPTGIKIF LAT+HGTQINYT
Sbjct: 6 AYFTSATMIIAVPTGIKIFSWLATLHGTQINYT 38
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2
Query: 572 AYFTSATISIAVPTGIKIFRXLATIHGTQINYT 670
AYFTSAT+ IAVPTGIKIF LAT+HGTQINY+
Sbjct: 7 AYFTSATMIIAVPTGIKIFSWLATLHGTQINYS 39
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 59.3 bits (137), Expect = 9e-08
Identities = 32/93 (34%), Positives = 41/93 (44%)
Frame = +2
Query: 374 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXX 553
FFGHPEVY+LILP FGI+SHI FG +
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 554 XXXXHEAYFTSATISIAVPTGIKIFRXLATIHG 652
+F+S T+ I +PTGIK+F L + G
Sbjct: 61 YDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 137
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 15 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 113
+VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 33 MVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +1
Query: 241 HFYYYIT---TCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 384
++ Y+IT TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 102 NYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = +3
Query: 57 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 236
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 237 T 239
T
Sbjct: 132 T 132
Score = 36.7 bits (81), Expect = 0.54
Identities = 15/22 (68%), Positives = 21/22 (95%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDR 304
++ +++SLPVLAGAIT+LLTDR
Sbjct: 133 TVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 51.2 bits (117), Expect = 2e-05
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 11/155 (7%)
Frame = +2
Query: 248 IIISLPVLAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEV 394
++ + L A+ IL +D L T++F D G +L+ HLF FFGHPEV
Sbjct: 206 MLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEV 265
Query: 395 YILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXDLLFEXXXXXXXXXXXXHEA 574
YI+ P G+++ G++ G + +
Sbjct: 266 YIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSFVVWMHHMFLTGINLPIKT 324
Query: 575 YFTSATISIAVPTGIKIFRXLATIHGTQINYTLIF 679
F + TI I++P + +F + T+ ++ +T F
Sbjct: 325 IFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPF 359
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/60 (36%), Positives = 38/60 (63%)
Frame = +2
Query: 263 PVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 442
P + G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 230 PEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3
Query: 27 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 137
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 40.3 bits (90), Expect = 0.044
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +2
Query: 248 IIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 376
+I+S PVLA AIT+L R N SFF P G P + F F
Sbjct: 185 LILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/85 (34%), Positives = 41/85 (48%)
Frame = +1
Query: 253 YITTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFS 432
Y TT S S +N N SKL++I+ S PN I ILI T L+ N T I +
Sbjct: 101 YFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNSTSIRNRIT 160
Query: 433 YYFTRKRKKRNFWLFRNNLCYTSNW 507
+ +K N ++NNL ++ W
Sbjct: 161 HLHNIFSQKSNILYYKNNLRHSIYW 185
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/26 (69%), Positives = 25/26 (96%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNT 316
++ +++SLPVLAGAIT+LLTDRN+NT
Sbjct: 176 AVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 559 IDTRGIFYFSYYKYCCTNRN*NF*MXSYNTWDSN*LYPN 675
+DTR F F+ Y YC N NF M Y +WD+N L+P+
Sbjct: 2 VDTRAYFTFNNYNYCHPYSNLNFLMTCYPSWDTNLLHPS 40
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 42.3 bits (95), Expect = 0.011
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = +2
Query: 572 AYFTSATISIAVPTGIKIFRXLATIHGTQINY 667
AYFTSAT+ IA+PTGIK F LAT G I +
Sbjct: 304 AYFTSATMIIAIPTGIKAFSWLATXXGGTIKW 335
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 42.3 bits (95), Expect = 0.011
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +1
Query: 256 ITTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 372
++TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 96 VSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 41.9 bits (94), Expect = 0.014
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +2
Query: 572 AYFTSATISIAVPTGIKIFRXLAT 643
AYFTSAT+ IAVPTGIKIF LAT
Sbjct: 6 AYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 37.9 bits (84), Expect = 0.23
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +2
Query: 245 FIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 424
FI+ ++ ++ AI IL L+ D +P+L + LF FFGHP VY +LP +
Sbjct: 179 FILWTIMIVPVAIEILFQLLPLSLGLVDEI---NPLLARTLFWFFGHPVVYFWLLPAYVA 235
Query: 425 ISHI---ISQERGK 457
+ I I E+GK
Sbjct: 236 LYTILPKIVSEKGK 249
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 37.5 bits (83), Expect = 0.31
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 436 YFTRKRKKRNFWLFRNNLCYTSNWVLGFIV*AHHIFTVGIAIDTRGIFYFS 588
Y K FW +CY N +G V HH+FTVG+ ++T +F+ S
Sbjct: 21 YVKNKYVSSCFWFLWFVVCYVFNMCMGSSVWGHHMFTVGLDVNT-AVFFSS 70
Score = 33.1 bits (72), Expect = 6.6
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 575 YFTSATISIAVPTGIKIFRXLATIHGTQIN 664
+F+S T+ I VPTGIK+F L + +++N
Sbjct: 67 FFSSVTMIIRVPTGIKVFTWLYMLSNSRVN 96
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 37.5 bits (83), Expect = 0.31
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +1
Query: 361 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNW 507
T ILI W S+Y F IW +F+ T FW+ N L + SNW
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNW 49
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 37.5 bits (83), Expect = 0.31
Identities = 26/74 (35%), Positives = 39/74 (52%)
Frame = +2
Query: 236 YSIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 415
+SI I ++LP LA A T+ T +F + +L+ LF F+GHP VY + P
Sbjct: 193 FSIVIAVTLPALAAA-TLWYT------LYFFANVPVNNLLWAILFWFYGHPVVYYVPFPL 245
Query: 416 FGIISHIISQERGK 457
FG + + I Q G+
Sbjct: 246 FGALYYYIPQYAGR 259
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 37.1 bits (82), Expect = 0.41
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 248 IIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 427
+++ P + L+D + F+ G P+ Y F F HPEVY+ ILP F I
Sbjct: 289 LVVESPATYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAFAIW 347
Query: 428 SHII 439
I+
Sbjct: 348 LEIL 351
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 37.1 bits (82), Expect = 0.41
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 572 AYFTSATISIAVPTGIKIFRXLATIHGTQINYT 670
A+FTS TI I++PTG K+F L T T T
Sbjct: 12 AFFTSTTILISIPTGTKVFNWLCTYMSTNFGIT 44
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 36.3 bits (80), Expect = 0.71
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2
Query: 572 AYFTSATISIAVPTGIKIF 628
AYFT+AT+ IAVPTGIKIF
Sbjct: 12 AYFTAATMIIAVPTGIKIF 30
>UniRef50_Q4U9E9 Cluster: Mannosyltransferase, putative; n=2;
Theileria|Rep: Mannosyltransferase, putative - Theileria
annulata
Length = 429
Score = 35.9 bits (79), Expect = 0.94
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 208 YPYLYEL*GLQHFYYYITTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS 387
YP +Y L + H Y C ++ + + L I + + R +S F+T
Sbjct: 183 YPVIYALPVVFHLYSRELVCCWLNFRKFLMKLPLLLITHINFKQIRFAILSFLSFAFFTY 242
Query: 388 *SLY-FNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCY 495
+ Y + F I+ ++ Y++ RK + NF L+ N + Y
Sbjct: 243 LTFYLYGFESIYESYLYHYVRKDHRHNFSLYFNLMYY 279
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 338 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 454
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 508 VLGFIV*AHHIFTVGIAIDTRGIFYFS 588
V+G+ V AHH+FTVG+ +DTR YFS
Sbjct: 39 VVGYFVWAHHMFTVGLDVDTR--VYFS 63
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 572 AYFTSATISIAVPTGIKIFRXLAT 643
AYF++ TI IA+PTG KIF L T
Sbjct: 16 AYFSAMTIMIAIPTGTKIFNWLGT 39
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 386 PEVYILILPGFGIISHIISQERGKK 460
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 33.5 bits (73), Expect = 5.0
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 239 SIFIIISLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 412
+I ++++ P LA + ++ +N +F G D ++F FFGHP VY L+ P
Sbjct: 221 AIDMLVATPPLAALLLVMFIGSTVNPNFGINVGLAD-----NMFWFFGHPIVYQLLFP 273
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 6.6
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 84 GRSVDLAIFSLHLAGISS 137
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,614,160
Number of Sequences: 1657284
Number of extensions: 10174864
Number of successful extensions: 21240
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 20297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21122
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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