Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0644
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   6.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.1  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 483 YFYFFLIYFLC 515
           YF F+  YFLC
Sbjct: 153 YFQFYYTYFLC 163


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 474 CEPYFYFFLIYFLCAH 521
           C  YFY+  I  LC +
Sbjct: 99  CTYYFYYAFIILLCVY 114



 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 474 CEPYFYFFLIYFLCA 518
           C  YFY+  + F CA
Sbjct: 257 CIYYFYYMHLLFCCA 271


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 423 GXKWLLEPIDIYDVNAPPT 367
           G  W L+    +DV AP T
Sbjct: 250 GHSWYLQSTSNHDVGAPAT 268


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 278 VVPTRADSKRSYLIACYQVKKVRYRK 201
           +V T  D +    + CY     RYRK
Sbjct: 164 IVETVYDPREDDRVVCYVQAAARYRK 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,828
Number of Sequences: 336
Number of extensions: 3114
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)