Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0644
         (606 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X63745-1|CAA45277.1|  212|Homo sapiens KDEL receptor protein.          31   2.4  
BC012994-1|AAH12994.1|  212|Homo sapiens KDEL (Lys-Asp-Glu-Leu) ...    31   2.4  
BC008081-1|AAH08081.1|  212|Homo sapiens KDEL (Lys-Asp-Glu-Leu) ...    31   2.4  
AC072052-1|AAS02002.1|  212|Homo sapiens unknown protein.              31   2.4  
BC071982-1|AAH71982.1|  186|Homo sapiens KDELR2 protein protein.       31   3.1  

>X63745-1|CAA45277.1|  212|Homo sapiens KDEL receptor protein.
          Length = 212

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +3

Query: 69  FLSLVGTAVKV*QYQTVYP-IHIVYLLNLMSLDTAGESIELEFIIFPVAYLLHLITSNEV 245
           F+SL  T++KV      Y  ++++YL    + D   ++  +EF++ PV  L  L+ +++ 
Sbjct: 55  FISLYNTSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLV-NHDF 113

Query: 246 GPLGV 260
            PL +
Sbjct: 114 SPLEI 118


>BC012994-1|AAH12994.1|  212|Homo sapiens KDEL (Lys-Asp-Glu-Leu)
           endoplasmic reticulum protein retention receptor 2
           protein.
          Length = 212

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +3

Query: 69  FLSLVGTAVKV*QYQTVYP-IHIVYLLNLMSLDTAGESIELEFIIFPVAYLLHLITSNEV 245
           F+SL  T++KV      Y  ++++YL    + D   ++  +EF++ PV  L  L+ +++ 
Sbjct: 55  FISLYNTSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLV-NHDF 113

Query: 246 GPLGV 260
            PL +
Sbjct: 114 SPLEI 118


>BC008081-1|AAH08081.1|  212|Homo sapiens KDEL (Lys-Asp-Glu-Leu)
           endoplasmic reticulum protein retention receptor 2
           protein.
          Length = 212

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +3

Query: 69  FLSLVGTAVKV*QYQTVYP-IHIVYLLNLMSLDTAGESIELEFIIFPVAYLLHLITSNEV 245
           F+SL  T++KV      Y  ++++YL    + D   ++  +EF++ PV  L  L+ +++ 
Sbjct: 55  FISLYNTSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLV-NHDF 113

Query: 246 GPLGV 260
            PL +
Sbjct: 114 SPLEI 118


>AC072052-1|AAS02002.1|  212|Homo sapiens unknown protein.
          Length = 212

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +3

Query: 69  FLSLVGTAVKV*QYQTVYP-IHIVYLLNLMSLDTAGESIELEFIIFPVAYLLHLITSNEV 245
           F+SL  T++KV      Y  ++++YL    + D   ++  +EF++ PV  L  L+ +++ 
Sbjct: 55  FISLYNTSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLV-NHDF 113

Query: 246 GPLGV 260
            PL +
Sbjct: 114 SPLEI 118


>BC071982-1|AAH71982.1|  186|Homo sapiens KDELR2 protein protein.
          Length = 186

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +3

Query: 69  FLSLVGTAVKV*QYQTVYP-IHIVYLLNLMSLDTAGESIELEFIIFPVAYLLHLITSNEV 245
           F+SL  T++KV      Y  ++++YL    + D   ++  +EF++ PV  L  L+ +++ 
Sbjct: 55  FISLYNTSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLV-NHDF 113

Query: 246 GPL 254
            PL
Sbjct: 114 SPL 116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,854,386
Number of Sequences: 237096
Number of extensions: 1808422
Number of successful extensions: 2560
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2560
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)