Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0642
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.2  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.7  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 487 CKSQYFTNNRDE 452
           C+S  F NNRDE
Sbjct: 389 CRSSTFRNNRDE 400


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 605 YYNFFCN*FVIVVYRI 652
           Y  FFC+ F++V+ ++
Sbjct: 49  YVTFFCSLFIVVILKL 64


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 570 SKRDKGHFELRFFYNNMLLYYATHNRFFASHNI 472
           SK+DK  +++  +Y N   Y     +F   H I
Sbjct: 80  SKKDKDGYKVVCYYTNWSQYRVKIGKFTPEHII 112


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/33 (27%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -1

Query: 523 YVIILCYSQSILCKSQYFTNNR--DEIDFRVFN 431
           ++II+C+ +++  K  Y  NN   D +++ + N
Sbjct: 7   FMIIICFERNLSYKVMYNGNNNVTDLVEYVLLN 39


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 536 FFIIICYYTMLLTIDSLQVTIF 471
           F    CYY   +T D +  T+F
Sbjct: 270 FSFCYCYYNSKMTKDGVYNTLF 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,651
Number of Sequences: 336
Number of extensions: 2757
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)