Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0639
         (721 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   2.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   2.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.1  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   8.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 443 TKDNGNLDGIIAFSND 490
           T+DNG+L  I+ FSN+
Sbjct: 496 TEDNGSLYAILNFSNE 511


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 443 TKDNGNLDGIIAFSND 490
           T+DNG+L  I+ FSN+
Sbjct: 496 TEDNGSLYAILNFSNE 511


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 422 NTPLTASTKDNGNLDGIIAFSNDAIYQKL 508
           N+P    + DN  L GI+  SN   Y  L
Sbjct: 401 NSPSIFISDDNQKLTGIVQISNMTEYNGL 429


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 584 WLSSTT*VYSYLLIIKTLI 528
           WLS    +++Y++I+ TL+
Sbjct: 410 WLSFFIVIFTYIIILITLV 428


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,141
Number of Sequences: 438
Number of extensions: 4344
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)