Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0636
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   3.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   3.2  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = -1

Query: 698 EPWRYTPFSTVGAPERSYFPFHILLVG----ILS*INRKVISSNAPIPNPIV 555
           +P +  PF+TVGA  ++   F   LVG     L  +  +V+ S   + N ++
Sbjct: 194 KPPQAPPFATVGANLQATVSFGTNLVGGIVRSLGTLGSRVVESGTKLANMVI 245


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +3

Query: 153 VIDIIASHL-VSIFNDCIKCGVFPDLMKHSKVIPLLNLVVLMT-PLTIDLFQY 305
           V+  + SH  ++ +  C+   VFP    H     L  +V++   PL + +F Y
Sbjct: 188 VVFHVESHPNITWYQQCVTYNVFP-TYAHELTYLLFGMVMMYALPLAVIIFSY 239


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +3

Query: 153 VIDIIASHL-VSIFNDCIKCGVFPDLMKHSKVIPLLNLVVLMT-PLTIDLFQY 305
           V+  + SH  ++ +  C+   VFP    H     L  +V++   PL + +F Y
Sbjct: 188 VVFHVESHPNITWYQQCVTYNVFP-TYAHELTYLLFGMVMMYALPLAVIIFSY 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,186
Number of Sequences: 336
Number of extensions: 3574
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)