Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0636
(707 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 64 2e-10
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 63 3e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 63 3e-10
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 59 5e-09
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 56 5e-08
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 54 2e-07
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 54 2e-07
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 54 2e-07
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 54 2e-07
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 54 2e-07
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 54 2e-07
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 53 3e-07
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 52 6e-07
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 51 2e-06
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 46 4e-05
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 46 4e-05
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 46 4e-05
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 46 5e-05
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 46 5e-05
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 46 5e-05
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 44 2e-04
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 44 2e-04
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 44 2e-04
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 43 4e-04
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 38 0.010
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/78 (35%), Positives = 49/78 (62%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIF 457
P +YRPIS+L +LSK++E++I +L + +L + QFGF +G ST + L K+I
Sbjct: 511 PESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHIL 570
Query: 458 QSWEESHDCLGIFCDLSK 511
Q++++ C +F D+ +
Sbjct: 571 QAFDDKEYCNAVFIDMQQ 588
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 63.3 bits (147), Expect = 3e-10
Identities = 30/78 (38%), Positives = 45/78 (57%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIF 457
PS+YRPIS+L LSK+FEK++L ++ H + NN L QFGF T + + I
Sbjct: 506 PSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIR 565
Query: 458 QSWEESHDCLGIFCDLSK 511
++E C IF D+++
Sbjct: 566 TAFEHREYCTAIFLDVAQ 583
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 63.3 bits (147), Expect = 3e-10
Identities = 30/78 (38%), Positives = 45/78 (57%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIF 457
PS+YRPIS+L LSK+FEK++L ++ H + NN L QFGF T + + I
Sbjct: 506 PSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIR 565
Query: 458 QSWEESHDCLGIFCDLSK 511
++E C IF D+++
Sbjct: 566 TAFEHREYCTAIFLDVAQ 583
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 59.3 bits (137), Expect = 5e-09
Identities = 23/76 (30%), Positives = 46/76 (60%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIF 457
P++YRPIS+LP++SK+FE++I +++ ++ + QFGF G T + +++ I
Sbjct: 510 PASYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQIL 569
Query: 458 QSWEESHDCLGIFCDL 505
+++ C +F D+
Sbjct: 570 TAYDSKEYCNSLFLDI 585
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 56.0 bits (129), Expect = 5e-08
Identities = 27/77 (35%), Positives = 44/77 (57%)
Frame = +2
Query: 281 SNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQ 460
S+YRPIS+L +SK+FEK +L +L +H +N++ QFGF T + + I
Sbjct: 509 SSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRT 568
Query: 461 SWEESHDCLGIFCDLSK 511
++E C +F D+S+
Sbjct: 569 AFEYREYCTAVFLDVSQ 585
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 54.0 bits (124), Expect = 2e-07
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKN 451
P +YRPIS+L LSK+FE+++L +L ++ FK LH QFGF + T A + +
Sbjct: 439 PKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH--QFGFRKEHGTEQQIARVTQF 496
Query: 452 IFQSWEESHDCLGIFCDLSK 511
I +++E C +F D+S+
Sbjct: 497 ILEAFERKEYCSAVFLDISE 516
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +3
Query: 129 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLL 257
I+ +++K++ +L+ I+N ++ G +PD KH++V +L
Sbjct: 388 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMIL 430
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 54.0 bits (124), Expect = 2e-07
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKN 451
P +YRPIS+L LSK+FE+++L +L ++ FK LH QFGF + T A + +
Sbjct: 567 PKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH--QFGFRKEHGTEQQIARVTQF 624
Query: 452 IFQSWEESHDCLGIFCDLSK 511
I +++E C +F D+S+
Sbjct: 625 ILEAFERKEYCSAVFLDISE 644
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 54.0 bits (124), Expect = 2e-07
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKN 451
P +YRPIS+L LSK+FE+++L +L ++ FK LH QFGF + T A + +
Sbjct: 555 PKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH--QFGFRKEHGTEQQIARVTQF 612
Query: 452 IFQSWEESHDCLGIFCDLSK 511
I +++E C +F D+S+
Sbjct: 613 ILEAFERKEYCSAVFLDISE 632
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +3
Query: 129 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLL 257
I+ +++K++ +L+ I+N ++ G +PD KH++V +L
Sbjct: 504 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMIL 546
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 54.0 bits (124), Expect = 2e-07
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKN 451
P +YRPIS+L LSK+FE+++L +L ++ FK LH QFGF + T A + +
Sbjct: 555 PKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH--QFGFRKEHGTEQQIARVTQF 612
Query: 452 IFQSWEESHDCLGIFCDLSK 511
I +++E C +F D+S+
Sbjct: 613 ILEAFERKEYCSAVFLDISE 632
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +3
Query: 129 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLL 257
I+ +++K++ +L+ I+N ++ G +PD KH++V +L
Sbjct: 504 ITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKHAQVKMIL 546
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 54.0 bits (124), Expect = 2e-07
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKN 451
P +YRPIS+L LSK+FE+++L +L ++ FK LH QFGF + T A + +
Sbjct: 517 PKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH--QFGFRKEHGTEQQIARVTQF 574
Query: 452 IFQSWEESHDCLGIFCDLSK 511
I +++E C +F D+S+
Sbjct: 575 ILEAFERKEYCSAVFLDISE 594
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +3
Query: 129 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLL 257
I+ +++K++ +L+ I+N ++ G +PD KH++V +L
Sbjct: 466 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMIL 508
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 54.0 bits (124), Expect = 2e-07
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKN 451
P +YRPIS+L LSK+FE+++L +L ++ FK LH QFGF + T A + +
Sbjct: 555 PKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH--QFGFRKEHGTEQQIARVTQF 612
Query: 452 IFQSWEESHDCLGIFCDLSK 511
I +++E C +F D+S+
Sbjct: 613 ILEAFERKEYCSAVFLDISE 632
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +3
Query: 129 ISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLL 257
I+ +++K++ +L+ I+N ++ G +PD KH++V +L
Sbjct: 504 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMIL 546
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 53.2 bits (122), Expect = 3e-07
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQL--LEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKN 451
P +YRPIS+L LSKIFE+++L +L ++ FK LH QFGF + + A + +
Sbjct: 555 PRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLH--QFGFRKEHGSEQQIARVTQF 612
Query: 452 IFQSWEESHDCLGIFCDLSK 511
I +++E C +F D+S+
Sbjct: 613 ILEAFERKEYCSAVFLDISE 632
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 52.4 bits (120), Expect = 6e-07
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +2
Query: 281 SNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYL 442
S+YRPIS+ ++KI +KII +L NNL+++KQFGF +G+ST+D Y+
Sbjct: 506 SSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGKSTSDCLLYV 559
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +2
Query: 284 NYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQS 463
+YRPIS+L LSK+FEK +L ++ H K++N L + QF F + + I +
Sbjct: 49 SYRPISLLTCLSKLFEKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTA 108
Query: 464 WEESHDCLGIFCDLSK 511
+E C +F D+++
Sbjct: 109 FEHREYCTALFLDVAQ 124
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 46.4 bits (105), Expect = 4e-05
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRST 421
P +YRPIS+L LSKI EK+I +L++ +N L Q+GF G +T
Sbjct: 535 PESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNT 582
Score = 36.7 bits (81), Expect = 0.031
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +3
Query: 96 LNVKNTADLWGISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLL 257
L+ + + + GI LK++ +H+V+I N C++ G FP K +K++P+L
Sbjct: 473 LHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPIL 526
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 46.4 bits (105), Expect = 4e-05
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +2
Query: 284 NYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQS 463
+YRPIS+LP+L KI E++IL +LL + QFGF T + ++ ++
Sbjct: 316 SYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEA 375
Query: 464 WEESHDCLGIFCDLSK 511
E +G F D+ +
Sbjct: 376 MENKEYAVGAFLDIQQ 391
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 46.4 bits (105), Expect = 4e-05
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRST 421
P +YRPIS+L LSKI EK+I +L++ +N L Q+GF G +T
Sbjct: 483 PESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNT 530
Score = 36.7 bits (81), Expect = 0.031
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +3
Query: 96 LNVKNTADLWGISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLL 257
L+ + + + GI LK++ +H+V+I N C++ G FP K +K++P+L
Sbjct: 421 LHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPIL 474
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 46.0 bits (104), Expect = 5e-05
Identities = 23/77 (29%), Positives = 43/77 (55%)
Frame = +2
Query: 281 SNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQ 460
++YRPIS+L LSK+ E+I+L +L + + + QFGF + A + + I +
Sbjct: 112 NSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILK 171
Query: 461 SWEESHDCLGIFCDLSK 511
+++E C F D+++
Sbjct: 172 AFDEKDVCSATFLDITE 188
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.0 bits (104), Expect = 5e-05
Identities = 23/77 (29%), Positives = 43/77 (55%)
Frame = +2
Query: 281 SNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQ 460
++YRPIS+L LSK+ E+I+L +L + + + QFGF + A + + I +
Sbjct: 559 NSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILK 618
Query: 461 SWEESHDCLGIFCDLSK 511
+++E C F D+++
Sbjct: 619 AFDEKDVCSATFLDITE 635
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.0 bits (104), Expect = 5e-05
Identities = 23/77 (29%), Positives = 43/77 (55%)
Frame = +2
Query: 281 SNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQ 460
++YRPIS+L LSK+ E+I+L +L + + + QFGF + A + + I +
Sbjct: 559 NSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILK 618
Query: 461 SWEESHDCLGIFCDLSK 511
+++E C F D+++
Sbjct: 619 AFDEKDVCSATFLDITE 635
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 44.4 bits (100), Expect = 2e-04
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +2
Query: 284 NYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQS 463
+YRP S+LP+L KI E++IL +LL + QFGF T + ++ ++
Sbjct: 514 SYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEA 573
Query: 464 WEESHDCLGIFCDLSK 511
E +G F D+ +
Sbjct: 574 MENKEYAVGAFLDIQQ 589
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +2
Query: 281 SNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDA 430
++YRPIS+L L K EKII +L K +NL+ + Q F ST DA
Sbjct: 511 NSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDA 560
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDA 430
P +YRP+ +L + K+FE+I+ ++ +S L +Q+GF +G+ST DA
Sbjct: 476 PRSYRPLCLLDIVGKLFERILYARIELITESPTGLQGQQYGFRKGKSTLDA 526
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 43.2 bits (97), Expect = 4e-04
Identities = 22/77 (28%), Positives = 42/77 (54%)
Frame = +2
Query: 281 SNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIFQ 460
++YRPIS+L LSK+ E+I+ +L + + + QFGF + A + + I +
Sbjct: 559 NSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILK 618
Query: 461 SWEESHDCLGIFCDLSK 511
+++E C F D+++
Sbjct: 619 AFDEKDVCSATFLDITE 635
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 38.3 bits (85), Expect = 0.010
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 96 LNVKNTADLWGISVKVLKSVIDIIASHLVSIFNDCIKCGVFPDLMKHSKVIPLL 257
L + + L GI+ + K+V I HL S+F+ CI+ G FP K +V+ LL
Sbjct: 446 LKSRRSPGLDGINGTICKAVWRAIPEHLASLFSRCIRLGYFPAEWKCPRVVSLL 499
Score = 36.7 bits (81), Expect = 0.031
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +2
Query: 278 PSNYRPISVLPTLSKIFEKIILTQLLEHFKSNNLLHNKQFGFTRGRSTTDAGAYLIKNIF 457
PS+YR I +LP K+ E I++ ++ E QFGF +GR DA ++ ++
Sbjct: 509 PSSYRGICLLPVFGKVLEAIMVNRVREVLPEG---CRWQFGFRQGRCVEDAWRHVKSSVG 565
Query: 458 QSWEESHDCLGIFCD 502
S + LG F D
Sbjct: 566 AS--AAQYVLGTFVD 578
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,586,617
Number of Sequences: 53049
Number of extensions: 620114
Number of successful extensions: 1129
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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