Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0635
         (570 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q85QA2 Cluster: I-Cg1I protein; n=1; Candida glabrata|R...    37   0.29 
UniRef50_A4CNS0 Cluster: Putative uncharacterized protein; n=2; ...    35   1.5  
UniRef50_Q3Y4G4 Cluster: Mating type 2 protein; n=2; Sclerotinia...    33   6.2  
UniRef50_Q7R8M2 Cluster: Putative uncharacterized protein PY0719...    32   8.2  

>UniRef50_Q85QA2 Cluster: I-Cg1I protein; n=1; Candida glabrata|Rep:
           I-Cg1I protein - Candida glabrata (Yeast) (Torulopsis
           glabrata)
          Length = 371

 Score = 37.1 bits (82), Expect = 0.29
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = -1

Query: 216 YLQYKRFSWFFYNYN*IHENVHK*PIITNNFILKMNLLSELYIYNNKSSYLIKMKK 49
           Y++Y   +   YNYN ++ N +    I NN +  MN+   + +YN    Y++ MK+
Sbjct: 9   YIKYNYNNNKLYNYNKLYNNNNSKRYINNNKLYIMNMKRYMSLYNKDKLYIMNMKR 64


>UniRef50_A4CNS0 Cluster: Putative uncharacterized protein; n=2;
           Flavobacteriales|Rep: Putative uncharacterized protein -
           Robiginitalea biformata HTCC2501
          Length = 397

 Score = 34.7 bits (76), Expect = 1.5
 Identities = 15/51 (29%), Positives = 30/51 (58%)
 Frame = +1

Query: 253 NLVIVTALQLLSKVSQETYSSVALIFNFLHTYRLSDA*KH*NYFISALFNF 405
           N+ I + +    K++Q+ Y+ + L++    TY+L +     NYF+ ++FNF
Sbjct: 43  NIGIPSFIDPAHKLTQDEYAKLNLLYGLYATYQLRNRTVRFNYFLESVFNF 93


>UniRef50_Q3Y4G4 Cluster: Mating type 2 protein; n=2; Sclerotinia
           sclerotiorum|Rep: Mating type 2 protein - Sclerotinia
           sclerotiorum
          Length = 394

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = +1

Query: 220 NLNYFILNIHYNLVIVTALQLLSKVSQETYSSVALIFNFLHT 345
           +LN F LNIH N   +T  QL S+ S+ TY+  ++  NF  T
Sbjct: 306 DLNTFGLNIHINHSNITEQQLQSENSRLTYNDQSIGMNFTST 347


>UniRef50_Q7R8M2 Cluster: Putative uncharacterized protein PY07199;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY07199 - Plasmodium yoelii yoelii
          Length = 845

 Score = 32.3 bits (70), Expect = 8.2
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = -1

Query: 198 FSWFFYNYN*IHENVHK*PIITNNFILKMNLLSELYIYNN 79
           FS+F+ NY+    N+     + NN ILK NLL+  Y +NN
Sbjct: 745 FSYFYINYD-TTSNIILNRTLKNNSILKENLLNLSYAFNN 783


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,164,110
Number of Sequences: 1657284
Number of extensions: 6535368
Number of successful extensions: 11787
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11784
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)