Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0631
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.59 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 15/56 (26%), Positives = 22/56 (39%)
 Frame = +1

Query: 172 NVKFSTYQGLAHSSSIAELKDMQEFIEKPCQHQSKCTIYYLKRLSYIQSTILDVLI 339
           +V  S Y      +S+       EFI K  +   KC   Y K+ S I   +  V +
Sbjct: 444 HVSTSAYVATVWINSVINRWKFIEFIRKVLEFDVKCVSNYTKQQSKIHLIVRSVFV 499


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 409 TLNCSPIKMKKCCLNQIPIH 350
           T+ C P+K +KC ++ + +H
Sbjct: 9   TIKC-PVKKRKCTVSNVSLH 27


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 103 HHELGILVNQQEPLSLQGNN 44
           H EL  +VN+  PLSL  ++
Sbjct: 324 HEELSAMVNRCHPLSLSSDH 343


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 619 LCCLEKNHLIVTLNWHLNLNISL 687
           L  +EKN  I+ LN + N+N  L
Sbjct: 368 LMAIEKNPPIMNLNGYANVNRKL 390


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 619 LCCLEKNHLIVTLNWHLNLNISL 687
           L  +EKN  I+ LN + N+N  L
Sbjct: 368 LMAIEKNPPIMNLNGYANVNRKL 390


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = -3

Query: 445 KFGLKCYFSKF*TLNCSPIKMKKC 374
           K+G  C    +    C   ++KKC
Sbjct: 225 KYGNNCEIDMYMRRKCQECRLKKC 248


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +3

Query: 558 Y*ANIKTK*PFTPLYTICKIIMLFRKKSFNSDIELAFEFEH 680
           Y ++I  K  F  + ++   + L     FNS +   F  EH
Sbjct: 156 YGSSINMKKRFVVMTSVIMTLALGNPYCFNSSVYKVFPVEH 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,343
Number of Sequences: 336
Number of extensions: 3855
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)