Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0631
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75712-3|CAB00042.2|  223|Caenorhabditis elegans Hypothetical pr...    60   1e-09
AY691524-1|AAU01163.1|  213|Caenorhabditis elegans acyl protein ...    55   6e-08
AY691523-1|AAU01162.1|  213|Caenorhabditis elegans acyl protein ...    55   6e-08
Z82276-1|CAB05238.1|  319|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z70757-10|CAE18045.2|  117|Caenorhabditis elegans Hypothetical p...    29   3.2  
Z47809-3|CAA87781.2|  322|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical p...    27   9.6  
U88167-10|AAB42222.1|  804|Caenorhabditis elegans Hypothetical p...    27   9.6  
U88167-9|AAK68288.1|  890|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.       27   9.6  
U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.       27   9.6  

>Z75712-3|CAB00042.2|  223|Caenorhabditis elegans Hypothetical
           protein K04G2.5 protein.
          Length = 223

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 29/86 (33%), Positives = 46/86 (53%)
 Frame = +1

Query: 10  VMSLSCWLPRHGYFPGGLKAPVDLPIFQAHGDKDPVVSFKWGQMTASCLKTFMKNVKFST 189
           ++ LS +  +   FPG   A    PIF  HG  D +V  ++GQM+   +K F   V+  T
Sbjct: 138 IVGLSSFFLQRTKFPGSFTANNATPIFLGHGTDDFLVPLQFGQMSEQYIKKFNPKVELHT 197

Query: 190 YQGLAHSSSIAELKDMQEFIEKPCQH 267
           Y+G+ HSS   E++D++ F+     H
Sbjct: 198 YRGMQHSSCGEEMRDVKTFLSAHIAH 223


>AY691524-1|AAU01163.1|  213|Caenorhabditis elegans acyl protein
           thioesterase 1 protein.
          Length = 213

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 27/76 (35%), Positives = 41/76 (53%)
 Frame = +1

Query: 10  VMSLSCWLPRHGYFPGGLKAPVDLPIFQAHGDKDPVVSFKWGQMTASCLKTFMKNVKFST 189
           ++ LS    +   FPG   A    PIF  HG  D +V  ++GQM+   +K F   V+  T
Sbjct: 138 IVGLSSXFLQRTKFPGSFTANNATPIFLGHGTDDFLVPLQFGQMSEQYIKKFNPKVELHT 197

Query: 190 YQGLAHSSSIAELKDM 237
           Y+G+ HSS   E++D+
Sbjct: 198 YRGMQHSSCGEEMRDV 213


>AY691523-1|AAU01162.1|  213|Caenorhabditis elegans acyl protein
           thioesterase 1 protein.
          Length = 213

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 27/76 (35%), Positives = 41/76 (53%)
 Frame = +1

Query: 10  VMSLSCWLPRHGYFPGGLKAPVDLPIFQAHGDKDPVVSFKWGQMTASCLKTFMKNVKFST 189
           ++ LS    +   FPG   A    PIF  HG  D +V  ++GQM+   +K F   V+  T
Sbjct: 138 IVGLSSXFLQRTKFPGSFTANNATPIFLGHGTDDFLVPLQFGQMSEQYIKKFNPKVELHT 197

Query: 190 YQGLAHSSSIAELKDM 237
           Y+G+ HSS   E++D+
Sbjct: 198 YRGMQHSSCGEEMRDV 213


>Z82276-1|CAB05238.1|  319|Caenorhabditis elegans Hypothetical
           protein K03D3.1 protein.
          Length = 319

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -2

Query: 473 VYSIAPIAEEVWFKVLFFKILDFKLLSYKDEKMLLKPNTHSPYDIISTS 327
           ++S+  I+  ++  V  F +  FKL   +D+K LL P  H  Y I+  S
Sbjct: 24  LHSLFLISVVLYLFVFPFYVYVFKLNKRRDKKTLLYPTVHHFYKIVKIS 72


>Z70757-10|CAE18045.2|  117|Caenorhabditis elegans Hypothetical
           protein ZK287.9 protein.
          Length = 117

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 442 FGLKCYFSKF*TLNCSPIKM 383
           F LKCY S+  T NC PI++
Sbjct: 25  FALKCYDSEMQTANCEPIQL 44


>Z47809-3|CAA87781.2|  322|Caenorhabditis elegans Hypothetical
           protein F42A8.3 protein.
          Length = 322

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = -2

Query: 434 KVLFFKILDFKLLSYKDEKMLLKPNTHSPYDI 339
           ++LF  +L F ++S ++E++   P T  P+D+
Sbjct: 7   RILFCSLLIFSVISLREERLETAPITDDPWDL 38


>Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical
           protein C50H2.3 protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +1

Query: 148 SCLKTFMKNVKFSTYQGLAHSSSIAELKDMQEFIEKPCQHQSKCTIYY 291
           +C+  + K+  +   Q   H ++  ++ D     EKPC + + C I Y
Sbjct: 563 TCIFVWKKDTHYCKCQPGFHGNNCDKVVDYDPCAEKPCLNGATCQIKY 610


>U88167-10|AAB42222.1|  804|Caenorhabditis elegans Hypothetical
           protein D2092.1a protein.
          Length = 804

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 61  LKAPVDLPIFQAHGDKDPVVSFKWGQMTASCLKTFMKNV 177
           LK   DLP+  A G  DP V F++         T  KN+
Sbjct: 63  LKNGEDLPVKDASGSSDPYVKFRYKDNIVYKSGTIFKNL 101


>U88167-9|AAK68288.1|  890|Caenorhabditis elegans Hypothetical
           protein D2092.1b protein.
          Length = 890

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 61  LKAPVDLPIFQAHGDKDPVVSFKWGQMTASCLKTFMKNV 177
           LK   DLP+  A G  DP V F++         T  KN+
Sbjct: 149 LKNGEDLPVKDASGSSDPYVKFRYKDNIVYKSGTIFKNL 187


>U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +1

Query: 148 SCLKTFMKNVKFSTYQGLAHSSSIAELKDMQEFIEKPCQHQSKCTIYY 291
           +C+  + K+  +   Q   H ++  ++ D     EKPC + + C I Y
Sbjct: 563 TCIFVWKKDTHYCKCQPGFHGNNCDKVVDYDPCAEKPCLNGATCQIKY 610


>U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +1

Query: 148 SCLKTFMKNVKFSTYQGLAHSSSIAELKDMQEFIEKPCQHQSKCTIYY 291
           +C+  + K+  +   Q   H ++  ++ D     EKPC + + C I Y
Sbjct: 563 TCIFVWKKDTHYCKCQPGFHGNNCDKVVDYDPCAEKPCLNGATCQIKY 610


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,203,740
Number of Sequences: 27780
Number of extensions: 355788
Number of successful extensions: 714
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)