Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0629
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   5.5  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   5.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.7  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   9.7  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = +3

Query: 567 IDIFKFVLMFLAHIIIKDAICLLTKKYSS 653
           ++ F+F   F+ + +I   + +L +KY +
Sbjct: 146 VEFFQFYAQFIVYFLIYAVLEMLLQKYKT 174


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 291 LVDVINLTRRNKNVVAFTTPYAHIVASFRGHN 196
           ++D   +  R     AF   YAH  A + GH+
Sbjct: 424 MMDGQQMMHRPPGDPAFHNQYAHYPAEYYGHH 455


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 439 NCMVRHKYTKHKHASSNNV 383
           NC+V + YTK+    +N +
Sbjct: 54  NCLVLNVYTKNLRTDTNRI 72


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 629 TYGIFYYYVS*KHKYKFKYI--YLSSWFFFI 543
           +Y +F Y+V    +YK+  I  +LS  FF +
Sbjct: 145 SYLLFDYFVQRNQEYKYYQILSHLSGIFFTV 175


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 321  HTNDRQWSPLLVDVINLTRRNKNVVAFTTPYAHIVASF 208
            HTN+R  S      +N    N    A TTP A +  S+
Sbjct: 1004 HTNNRTHSATSNSSVNANTNNIPTNAGTTPGAILAFSW 1041


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 184 TINEIMSSKRGDYVGIRCSKCYNIFVPSSQIDDVHE 291
           T N  +++  GD+V     +    F PS  +  +H+
Sbjct: 511 TYNRFLAATGGDHVISLIDEISFTFPPSPPLSQIHD 546


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -3

Query: 456 CRCFIIIVWLDTSTLSTSMQAATMWNKSDKRV 361
           C  F+I++ L  + +   M    +WN  + RV
Sbjct: 265 CPRFLIMLALSYTVIQEVMLFTILWNCQNTRV 296


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = +1

Query: 136 FISYLLNLSICLGHTTTINEIMSSKRGDYVGIRCSKCYN 252
           F  +L+       HTTT +    + R      RC + +N
Sbjct: 269 FTRHLIQRRTHTRHTTTSHNTRGTPRTTPASSRCGQLFN 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,986
Number of Sequences: 336
Number of extensions: 3456
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)