Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0629
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p pro...    29   8.0  
AY069414-1|AAL39559.1|  437|Drosophila melanogaster LD11036p pro...    29   8.0  
AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein.      29   8.0  
AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-P...    29   8.0  

>BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 24/91 (26%), Positives = 41/91 (45%)
 Frame = -3

Query: 444 IIIVWLDTSTLSTSMQAATMWNKSDKRVICVFFYPLDG*TKHTNDRQWSPLLVDVINLTR 265
           +I++W  ++  S       M  K+ +   C  FY L G      D  WSP  V + + + 
Sbjct: 93  LIMIWRKSAGSSGVFGTGGM-QKNHESWKC--FYTLRGHDGDVLDLAWSPNDVYLASCSI 149

Query: 264 RNKNVVAFTTPYAHIVASFRGHNFINCRGVS 172
            N  ++     + H VA+ +GH  +  +GVS
Sbjct: 150 DNTVIIWDAQAFPHSVATLKGHTGL-VKGVS 179


>AY069414-1|AAL39559.1|  437|Drosophila melanogaster LD11036p
           protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 24/91 (26%), Positives = 41/91 (45%)
 Frame = -3

Query: 444 IIIVWLDTSTLSTSMQAATMWNKSDKRVICVFFYPLDG*TKHTNDRQWSPLLVDVINLTR 265
           +I++W  ++  S       M  K+ +   C  FY L G      D  WSP  V + + + 
Sbjct: 93  LIMIWRKSAGSSGVFGTGGM-QKNHESWKC--FYTLRGHDGDVLDLAWSPNDVYLASCSI 149

Query: 264 RNKNVVAFTTPYAHIVASFRGHNFINCRGVS 172
            N  ++     + H VA+ +GH  +  +GVS
Sbjct: 150 DNTVIIWDAQAFPHSVATLKGHTGL-VKGVS 179


>AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 24/91 (26%), Positives = 41/91 (45%)
 Frame = -3

Query: 444 IIIVWLDTSTLSTSMQAATMWNKSDKRVICVFFYPLDG*TKHTNDRQWSPLLVDVINLTR 265
           +I++W  ++  S       M  K+ +   C  FY L G      D  WSP  V + + + 
Sbjct: 93  LIMIWRKSAGSSGVFGTGGM-QKNHESWKC--FYTLRGHDGDVLDLAWSPNDVYLASCSI 149

Query: 264 RNKNVVAFTTPYAHIVASFRGHNFINCRGVS 172
            N  ++     + H VA+ +GH  +  +GVS
Sbjct: 150 DNTVIIWDAQAFPHSVATLKGHTGL-VKGVS 179


>AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-PA
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 24/91 (26%), Positives = 41/91 (45%)
 Frame = -3

Query: 444 IIIVWLDTSTLSTSMQAATMWNKSDKRVICVFFYPLDG*TKHTNDRQWSPLLVDVINLTR 265
           +I++W  ++  S       M  K+ +   C  FY L G      D  WSP  V + + + 
Sbjct: 93  LIMIWRKSAGSSGVFGTGGM-QKNHESWKC--FYTLRGHDGDVLDLAWSPNDVYLASCSI 149

Query: 264 RNKNVVAFTTPYAHIVASFRGHNFINCRGVS 172
            N  ++     + H VA+ +GH  +  +GVS
Sbjct: 150 DNTVIIWDAQAFPHSVATLKGHTGL-VKGVS 179


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,132,265
Number of Sequences: 53049
Number of extensions: 517180
Number of successful extensions: 998
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)