Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0625
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.34 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   1.8  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    23   3.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   4.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   4.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 342 CLLYMYIFCIIMYCLWYTATYLLYFYILQFFC 247
           C+ Y Y   II+ C++Y     + F    F+C
Sbjct: 284 CIYYFYCALIILLCIYYFCRAFIIF-PTHFYC 314



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -3

Query: 342 CLLYMYIFCIIMYCLWYTATYLLYFYILQFF 250
           C  Y Y   II+ C++Y     + F +   F
Sbjct: 99  CTYYFYYAFIILLCVYYFYYAFIIFTVHLLF 129


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = -3

Query: 342 CLLYMYIFC---IIMYCLWYTATY 280
           CL  + IF    +I+YC++ TATY
Sbjct: 320 CLNILSIFTYVPMILYCVYTTATY 343


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = -3

Query: 342 CLLYMYIFC---IIMYCLWYTATY 280
           CL  + IF    +I+YC++ TATY
Sbjct: 45  CLNILSIFTYVPMILYCVYTTATY 68


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/21 (33%), Positives = 17/21 (80%)
 Frame = +1

Query: 571 VGTTALPISAVKQ*RVRFEGR 633
           +G+++LP+ +  + R+R++GR
Sbjct: 33  LGSSSLPLRSFYRSRIRYQGR 53


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 637 SRCNYTGSRIYI 672
           SRCN  G RIY+
Sbjct: 100 SRCNAVGVRIYV 111


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 637 SRCNYTGSRIYI 672
           SRCN  G RIY+
Sbjct: 101 SRCNAVGVRIYV 112


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 637 SRCNYTGSRIYI 672
           SRCN  G RIY+
Sbjct: 101 SRCNAVGVRIYV 112


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 288 ATYLLYFYILQFFCKLNGCLEEIAFSDKTAYC 193
           ATYLL+  +L+    LNG      +  K+ YC
Sbjct: 6   ATYLLFLALLKNISALNGAWR---WECKSNYC 34


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/47 (25%), Positives = 19/47 (40%)
 Frame = -3

Query: 663 SRPGIVTTAAPPFEPNALLLHGRNRQGGGTYPRGLTRRPTTSKYPNL 523
           S+PG   +  P   P  L +  R R    +  +   R+P T   P +
Sbjct: 227 SKPGTPPSGEPGNGPLDLSVSSRKRSNDDSVSQPPNRKPRTDFKPQV 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,036
Number of Sequences: 336
Number of extensions: 2723
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)