Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0625
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   3.0  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   7.0  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.2  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = -3

Query: 645 TTAAPPFEPNALLLHGRNRQGGGTYPRGLTRRPTTSKYPNLH 520
           TT  PP      +L   N  GGG  P G     TTS   + H
Sbjct: 567 TTRLPPLHQPFPML--ANHAGGGAIPEGQEPTSTTSLTTSAH 606


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 600 GRNRQGGGTYPRGLTRRPTTSKY 532
           G+  Q GG YPRG  R    + Y
Sbjct: 253 GQYDQRGGNYPRGTERNRNGNGY 275


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -1

Query: 605  FTAEIGRAVVPTRADSQDVLP-PVN 534
            F AEIG ++V    DS ++LP P N
Sbjct: 942  FHAEIGMSLVLKVGDSSEMLPAPAN 966


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,570
Number of Sequences: 2352
Number of extensions: 11052
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)