Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0624
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    58   5e-11
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    50   1e-08
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.2  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 58.4 bits (135), Expect = 5e-11
 Identities = 34/78 (43%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
 Frame = +2

Query: 272 VKVRQPRLNHSPFNVNIEVD--SNVASDAVVKIFLAPKYDDNGIPLTLEDNWMKFFELDW 445
           V VR   L H PF   I V+  SN       +IFLAPK D+ G P    D  + F ELD 
Sbjct: 470 VFVRFTHLQHQPFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPWLFRDQKIMFIELDK 529

Query: 446 FTTKLTAGQNKIIRNSNE 499
           FT  L  GQN I R S++
Sbjct: 530 FTVNLKQGQNTITRASSQ 547



 Score = 41.5 bits (93), Expect = 6e-06
 Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
 Frame = +3

Query: 39  TSLRDPAFYQLYNRIVEYIVEFKQYLKPYTQDKLYFDGVKITDVKV-------DKLTTFF 197
           T++RDP FY+ ++ I +   E+K  L  YT+++L + G+ +++++V       +   TF+
Sbjct: 392 TAMRDPIFYRWHSYIDDIFQEYKATLPRYTENQLNYPGITVSNIEVQSQGSSKNTFNTFW 451

Query: 198 ENFEFDASNSVYF 236
           +  + D S  + F
Sbjct: 452 QQSDVDLSRGMDF 464


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 50.4 bits (115), Expect = 1e-08
 Identities = 43/142 (30%), Positives = 61/142 (42%), Gaps = 3/142 (2%)
 Frame = +2

Query: 272 VKVRQPRLNHSPFNVNIEVDSNVASD-AVVKIFLAPKYDDNGIPLTLEDNWMKFFELDWF 448
           V VR   L +  F   I V+++  +     +IFLAP++D+ G P    +    F ELD F
Sbjct: 470 VFVRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDMFIELDRF 529

Query: 449 TTKLTAGQNKIIRNSNE--FVILKKTPCQ*LKL*RCSTKGKYLLICPKSSVTCLKDSCWP 622
              L  G N I R+S E    I  +   + L   R  T G  L           +    P
Sbjct: 530 AVSLKQGTNTITRHSTESSLTIPFERTFRNLDANR-PTGGDALSEFNFCGCGWPQHMLLP 588

Query: 623 RGTEGGFPFQLFVFVYPFRQQR 688
           +GTE G+P  LFV +  +   R
Sbjct: 589 KGTEAGYPCHLFVMISNYADDR 610



 Score = 39.5 bits (88), Expect = 3e-05
 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
 Frame = +3

Query: 45  LRDPAFYQLYNRIVEYIVEFKQYLKPYTQDKLYFDGVKITDVKV-------DKLTTFFEN 203
           LRDP F++ +  I +   EFK  L  YT  +L + GV +T+++V       + L+TF++ 
Sbjct: 394 LRDPLFFRWHAYIDDMFQEFKATLPRYTVAQLNYPGVTVTNIEVQAKGGKPNVLSTFWQQ 453

Query: 204 FEFDASNSVYF 236
            + D S  + F
Sbjct: 454 SDLDLSRGLDF 464


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 462 VSLVVNQSNSKNFIQLSSNVRGIPLSSYL 376
           VSL++N  N +   ++   VR + ++SYL
Sbjct: 119 VSLIINYENQRTRSRIHLFVRYVFVTSYL 147


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 603 RHVTELFGHIKRYFP 559
           +H+TE+   I R FP
Sbjct: 9   KHITEIIADIYRQFP 23


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 275 KVRQPRLNHSPFNVNIE 325
           K   P LNH P N+ I+
Sbjct: 255 KQELPDLNHKPLNLTIK 271


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 275 KVRQPRLNHSPFNVNIE 325
           K   P LNH P N+ I+
Sbjct: 147 KQELPDLNHKPLNLTIK 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,127
Number of Sequences: 336
Number of extensions: 3146
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)