Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0620
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   3.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.8  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   7.8  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   7.8  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   7.8  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   7.8  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   7.8  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 266 CRSGDXTPDVXRITGNSN 213
           C S D  PD+    GN+N
Sbjct: 112 CGSHDEIPDISSTRGNNN 129


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 266 CRSGDXTPDVXRITGNSN 213
           C S D  PD+    GN+N
Sbjct: 60  CGSHDEIPDISSTRGNNN 77


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 266 CRSGDXTPDVXRITGNSN 213
           C S D  PD+    GN+N
Sbjct: 243 CGSHDEIPDISSTRGNNN 260


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -3

Query: 240 CNXNHGELQLKPSQCPFRSCPDRTRV 163
           C   +G  +    +CP  +CPD  ++
Sbjct: 696 CFCENGNNKCFTMECPQVTCPDNMKL 721


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 113 QASFLVIFPIDIAESGTSN 57
           + +FL   P+D+ ESG  N
Sbjct: 289 EGAFLCEDPVDLLESGRYN 307


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 113 QASFLVIFPIDIAESGTSN 57
           + +FL   P+D+ ESG  N
Sbjct: 289 EGAFLCEDPVDLLESGRYN 307


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 113 QASFLVIFPIDIAESGTSN 57
           + +FL   P+D+ ESG  N
Sbjct: 289 EGAFLCEDPVDLLESGRYN 307


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 113 QASFLVIFPIDIAESGTSN 57
           + +FL   P+D+ ESG  N
Sbjct: 289 EGAFLCEDPVDLLESGRYN 307


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 113 QASFLVIFPIDIAESGTSN 57
           + +FL   P+D+ ESG  N
Sbjct: 288 EGAFLCEDPVDLLESGRYN 306


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,589
Number of Sequences: 336
Number of extensions: 1797
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)