Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0620
         (479 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC131821-1|AAI31822.1|  317|Homo sapiens FRAS1 protein protein.        30   4.8  
BC131820-1|AAI31821.1| 1976|Homo sapiens FRAS1 protein protein.        30   4.8  
AJ512501-1|CAD54734.1| 4007|Homo sapiens extracellular matrix pr...    30   4.8  
AC131945-1|AAY41027.1|  475|Homo sapiens unknown protein.              30   4.8  

>BC131821-1|AAI31822.1|  317|Homo sapiens FRAS1 protein protein.
          Length = 317

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 240 CNXNHGELQLKPSQCPFRSCPDRTRVRFPD 151
           C+ NHGE++  P  CP  SC  +     P+
Sbjct: 116 CSCNHGEVRCTPQPCPPLSCGHQELAFIPE 145


>BC131820-1|AAI31821.1| 1976|Homo sapiens FRAS1 protein protein.
          Length = 1976

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 240 CNXNHGELQLKPSQCPFRSCPDRTRVRFPD 151
           C+ NHGE++  P  CP  SC  +     P+
Sbjct: 116 CSCNHGEVRCTPQPCPPLSCGHQELAFIPE 145


>AJ512501-1|CAD54734.1| 4007|Homo sapiens extracellular matrix
           protein protein.
          Length = 4007

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 240 CNXNHGELQLKPSQCPFRSCPDRTRVRFPD 151
           C+ NHGE++  P  CP  SC  +     P+
Sbjct: 116 CSCNHGEVRCTPQPCPPLSCGHQELAFIPE 145


>AC131945-1|AAY41027.1|  475|Homo sapiens unknown protein.
          Length = 475

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 240 CNXNHGELQLKPSQCPFRSCPDRTRVRFPD 151
           C+ NHGE++  P  CP  SC  +     P+
Sbjct: 80  CSCNHGEVRCTPQPCPPLSCGHQELAFIPE 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,850,778
Number of Sequences: 237096
Number of extensions: 1131142
Number of successful extensions: 1974
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1974
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)