Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0620
         (479 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023035-1|AAY55451.1|  345|Drosophila melanogaster IP11040p pro...   142   3e-34
AE014297-1419|AAF54729.1|  345|Drosophila melanogaster CG18547-P...   142   3e-34
AY118797-1|AAM50657.1|  342|Drosophila melanogaster GH17980p pro...   131   6e-31
AE014297-1421|AAF54731.1|  342|Drosophila melanogaster CG3397-PA...   131   6e-31
AE014297-1420|AAF54730.1|  294|Drosophila melanogaster CG12224-P...    74   1e-13
BT029129-1|ABJ17062.1|  994|Drosophila melanogaster IP16092p pro...    28   7.6  
AF205831-1|AAF14808.1|  717|Drosophila melanogaster Melted protein.    28   7.6  
AE014296-1200|AAF50606.1|  992|Drosophila melanogaster CG8624-PA...    28   7.6  
AE014296-1199|AAX52758.1|  988|Drosophila melanogaster CG8624-PB...    28   7.6  

>BT023035-1|AAY55451.1|  345|Drosophila melanogaster IP11040p
           protein.
          Length = 345

 Score =  142 bits (343), Expect = 3e-34
 Identities = 71/155 (45%), Positives = 93/155 (60%)
 Frame = +3

Query: 6   MRYNELGTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETGPWYGQGS 185
           M Y  LG TG++VS +S G  A    YG +D +  ++ + E++  GINY++T PWYGQG 
Sbjct: 22  MEYRNLGKTGLQVSKVSFGGGALCANYG-FDLEEGIKTVHEAVKSGINYIDTAPWYGQGR 80

Query: 186 SEKDIGKALVGVPRDSXYIGSXVAATTRSTLKMFDFSAEKXXXXXXXXXXXXXXDYVDLI 365
           SE+ +G AL  VPR+S YI + VA       KMFDFSA+K              DYVD+I
Sbjct: 81  SEEVLGLALKDVPRESYYIATKVARYELDYDKMFDFSAKKTRESVEKSLKLLGLDYVDVI 140

Query: 366 QVHDITFAPDTSVXLKETLPVLEXXVRVXXARFIG 470
           Q+HDI FA D  + + ETLP LE  V+   ARFIG
Sbjct: 141 QIHDIEFAKDLDIVINETLPTLEQLVKEGKARFIG 175


>AE014297-1419|AAF54729.1|  345|Drosophila melanogaster CG18547-PA
           protein.
          Length = 345

 Score =  142 bits (343), Expect = 3e-34
 Identities = 71/155 (45%), Positives = 93/155 (60%)
 Frame = +3

Query: 6   MRYNELGTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETGPWYGQGS 185
           M Y  LG TG++VS +S G  A    YG +D +  ++ + E++  GINY++T PWYGQG 
Sbjct: 22  MEYRNLGKTGLQVSKVSFGGGALCANYG-FDLEEGIKTVHEAVKSGINYIDTAPWYGQGR 80

Query: 186 SEKDIGKALVGVPRDSXYIGSXVAATTRSTLKMFDFSAEKXXXXXXXXXXXXXXDYVDLI 365
           SE+ +G AL  VPR+S YI + VA       KMFDFSA+K              DYVD+I
Sbjct: 81  SEEVLGLALKDVPRESYYIATKVARYELDYDKMFDFSAKKTRESVEKSLKLLGLDYVDVI 140

Query: 366 QVHDITFAPDTSVXLKETLPVLEXXVRVXXARFIG 470
           Q+HDI FA D  + + ETLP LE  V+   ARFIG
Sbjct: 141 QIHDIEFAKDLDIVINETLPTLEQLVKEGKARFIG 175


>AY118797-1|AAM50657.1|  342|Drosophila melanogaster GH17980p
           protein.
          Length = 342

 Score =  131 bits (316), Expect = 6e-31
 Identities = 63/156 (40%), Positives = 95/156 (60%), Gaps = 1/156 (0%)
 Frame = +3

Query: 6   MRYNELGTTGIKVSHISVGSAAFSNIYGK-YDEKRSLELIKESLNLGINYLETGPWYGQG 182
           M Y +LG+TG++VS I++G A  S ++   +D +  +  ++E++  GINY++T P+YGQG
Sbjct: 22  MEYRQLGSTGLRVSKIALGGATLSKLFSDDFDREEGILTVQEAIRSGINYIDTAPFYGQG 81

Query: 183 SSEKDIGKALVGVPRDSXYIGSXVAATTRSTLKMFDFSAEKXXXXXXXXXXXXXXDYVDL 362
            SE+ +G+AL  VPR++ YI + VA        MFD++A K              D VD+
Sbjct: 82  KSEELLGQALKDVPREAYYIATKVARYELDPNNMFDYTAAKARESVKRSLELLQLDRVDV 141

Query: 363 IQVHDITFAPDTSVXLKETLPVLEXXVRVXXARFIG 470
           +QVHD+  AP   + L ET+PVLE  V+   ARFIG
Sbjct: 142 LQVHDVDAAPSLDMVLNETIPVLEEYVQAGKARFIG 177


>AE014297-1421|AAF54731.1|  342|Drosophila melanogaster CG3397-PA
           protein.
          Length = 342

 Score =  131 bits (316), Expect = 6e-31
 Identities = 63/156 (40%), Positives = 95/156 (60%), Gaps = 1/156 (0%)
 Frame = +3

Query: 6   MRYNELGTTGIKVSHISVGSAAFSNIYGK-YDEKRSLELIKESLNLGINYLETGPWYGQG 182
           M Y +LG+TG++VS I++G A  S ++   +D +  +  ++E++  GINY++T P+YGQG
Sbjct: 22  MEYRQLGSTGLRVSKIALGGATLSKLFSDDFDREEGILTVQEAIRSGINYIDTAPFYGQG 81

Query: 183 SSEKDIGKALVGVPRDSXYIGSXVAATTRSTLKMFDFSAEKXXXXXXXXXXXXXXDYVDL 362
            SE+ +G+AL  VPR++ YI + VA        MFD++A K              D VD+
Sbjct: 82  KSEELLGQALKDVPREAYYIATKVARYELDPNNMFDYTAAKARESVKRSLELLQLDRVDV 141

Query: 363 IQVHDITFAPDTSVXLKETLPVLEXXVRVXXARFIG 470
           +QVHD+  AP   + L ET+PVLE  V+   ARFIG
Sbjct: 142 LQVHDVDAAPSLDMVLNETIPVLEEYVQAGKARFIG 177


>AE014297-1420|AAF54730.1|  294|Drosophila melanogaster CG12224-PA
           protein.
          Length = 294

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 39/94 (41%), Positives = 52/94 (55%)
 Frame = +3

Query: 189 EKDIGKALVGVPRDSXYIGSXVAATTRSTLKMFDFSAEKXXXXXXXXXXXXXXDYVDLIQ 368
           E+ I  AL  VPR++ YI + VA        MFD+SA+K              D VD++Q
Sbjct: 55  EEGILMALKDVPREAYYIATKVARYGLDPKNMFDYSADKARESVKRSLERLQLDRVDILQ 114

Query: 369 VHDITFAPDTSVXLKETLPVLEXXVRVXXARFIG 470
           VHD+  AP+  + L ET+PVLE  V+   ARFIG
Sbjct: 115 VHDVDAAPNLDIVLNETIPVLEEYVQAGKARFIG 148



 Score = 32.7 bits (71), Expect = 0.27
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 6   MRYNELGTTGIKVSHISVGSAAFSNI-YGKYDEKRSLELIKESLNLGINYLET 161
           M Y +LG+TG+ VS +++G +   N+ +  YD +  + +  + +     Y+ T
Sbjct: 22  MEYRQLGSTGLHVSKLAIGGSPLCNLFFDDYDREEGILMALKDVPREAYYIAT 74


>BT029129-1|ABJ17062.1|  994|Drosophila melanogaster IP16092p
           protein.
          Length = 994

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 24  GTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETG 164
           GTT  +  H  + +   S+I+  YD+K   EL+K +L + + +L  G
Sbjct: 98  GTTKEEPPHAKIAADIISSIFLNYDKK---ELMKIALPVAVQFLPKG 141


>AF205831-1|AAF14808.1|  717|Drosophila melanogaster Melted protein.
          Length = 717

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 24  GTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETG 164
           GTT  +  H  + +   S+I+  YD+K   EL+K +L + + +L  G
Sbjct: 98  GTTKEEPPHAKIAADIISSIFLNYDKK---ELMKIALPVAVQFLPKG 141


>AE014296-1200|AAF50606.1|  992|Drosophila melanogaster CG8624-PA,
           isoform A protein.
          Length = 992

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 24  GTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETG 164
           GTT  +  H  + +   S+I+  YD+K   EL+K +L + + +L  G
Sbjct: 98  GTTKEEPPHAKIAADIISSIFLNYDKK---ELMKIALPVAVQFLPKG 141


>AE014296-1199|AAX52758.1|  988|Drosophila melanogaster CG8624-PB,
           isoform B protein.
          Length = 988

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 24  GTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETG 164
           GTT  +  H  + +   S+I+  YD+K   EL+K +L + + +L  G
Sbjct: 98  GTTKEEPPHAKIAADIISSIFLNYDKK---ELMKIALPVAVQFLPKG 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,885,115
Number of Sequences: 53049
Number of extensions: 337533
Number of successful extensions: 766
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)