Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0620
(479 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.42
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.42
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.42
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.42
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 6.9
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 6.9
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 6.9
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 6.9
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 6.9
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.0 bits (52), Expect = 0.42
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 139 SVSTIWKPDPGTVRAAPKRT 198
+++ +WK D GT+R +P T
Sbjct: 213 AITYVWKNDEGTLRKSPSLT 232
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.0 bits (52), Expect = 0.42
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 139 SVSTIWKPDPGTVRAAPKRT 198
+++ +WK D GT+R +P T
Sbjct: 213 AITYVWKNDEGTLRKSPSLT 232
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.0 bits (52), Expect = 0.42
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 139 SVSTIWKPDPGTVRAAPKRT 198
+++ +WK D GT+R +P T
Sbjct: 264 AITYVWKNDEGTLRKSPSLT 283
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.0 bits (52), Expect = 0.42
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 139 SVSTIWKPDPGTVRAAPKRT 198
+++ +WK D GT+R +P T
Sbjct: 213 AITYVWKNDEGTLRKSPSLT 232
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 239 HREXSRRYDKEHSK 280
+RE +RRY+K H++
Sbjct: 12 YREKNRRYEKLHNE 25
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 239 HREXSRRYDKEHSK 280
+RE +RRY+K H++
Sbjct: 12 YREKNRRYEKLHNE 25
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 239 HREXSRRYDKEHSK 280
+RE +RRY+K H++
Sbjct: 12 YREKNRRYEKLHNE 25
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 239 HREXSRRYDKEHSK 280
+RE +RRY+K H++
Sbjct: 12 YREKNRRYEKLHNE 25
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 239 HREXSRRYDKEHSK 280
+RE +RRY+K H++
Sbjct: 12 YREKNRRYEKLHNE 25
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 239 HREXSRRYDKEHSK 280
+RE +RRY+K H++
Sbjct: 12 YREKNRRYEKLHNE 25
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 239 HREXSRRYDKEHSK 280
+RE +RRY+K H++
Sbjct: 12 YREKNRRYEKLHNE 25
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 6.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 239 HREXSRRYDKEHSK 280
+RE RRY+K H++
Sbjct: 12 YREKDRRYEKLHNE 25
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 6.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 239 HREXSRRYDKEHSK 280
+RE RRY+K H++
Sbjct: 12 YREKDRRYEKLHNE 25
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.0 bits (42), Expect = 6.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 239 HREXSRRYDKEHSK 280
+RE RRY+K H++
Sbjct: 12 YREKDRRYEKLHNE 25
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 6.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 239 HREXSRRYDKEHSK 280
+RE RRY+K H++
Sbjct: 12 YREKDRRYEKLHNE 25
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 6.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 239 HREXSRRYDKEHSK 280
+RE RRY+K H++
Sbjct: 245 YREKDRRYEKLHNE 258
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,536
Number of Sequences: 438
Number of extensions: 2114
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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