Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0617
(697 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 23 2.4
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 23 2.4
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 23 2.4
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 3.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 3.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 3.2
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 4.2
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 21 7.3
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 7.3
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 9.6
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 21 9.6
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 9.6
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 8 SKGVQYLNEIKDSVVAGFQ 64
SK ++Y+N + D VAGF+
Sbjct: 183 SKIIEYMNHLVDLGVAGFR 201
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 8 SKGVQYLNEIKDSVVAGFQ 64
SK ++Y+N + D VAGF+
Sbjct: 184 SKIIEYMNHLVDLGVAGFR 202
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 8 SKGVQYLNEIKDSVVAGFQ 64
SK ++Y+N + D VAGF+
Sbjct: 184 SKIIEYMNHLVDLGVAGFR 202
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 237 SLYIFVNSVS*SSCGWYLRCTEQTSWSRFRRVPG 338
+LY+ SV S GW+ +TS+ F R G
Sbjct: 9 TLYLIPVSVILISVGWWENFVSETSYLPFIRALG 42
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 237 SLYIFVNSVS*SSCGWYLRCTEQTSWSRFRRVPG 338
+LY+ SV S GW+ +TS+ F R G
Sbjct: 242 TLYLIPVSVILISVGWWENFVSETSYLPFIRALG 275
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 237 SLYIFVNSVS*SSCGWYLRCTEQTSWSRFRRVPG 338
+LY+ SV S GW+ +TS+ F R G
Sbjct: 242 TLYLIPVSVILISVGWWENFVSETSYLPFIRALG 275
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.2 bits (45), Expect = 4.2
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +3
Query: 642 HVYFQQHMFPHHIKAD 689
H++ Q H+ HH+ A+
Sbjct: 329 HIHAQHHVVNHHVAAN 344
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 349 PMFIVKAYLPVNESFGFT 402
P F P+N SF FT
Sbjct: 629 PTFTALGLFPINGSFAFT 646
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -2
Query: 366 LHNEHRCTCHLGLF 325
+H H+CTC G +
Sbjct: 356 IHAGHKCTCPEGFY 369
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 472 GGPANGRIRTAGRP 431
GGP N +R+ G P
Sbjct: 82 GGPVNDDVRSPGTP 95
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -3
Query: 485 HGSPGRTCQWSNTHC 441
+G G+TC ++HC
Sbjct: 134 NGWKGKTCSLKDSHC 148
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 472 GGPANGRIRTAGRP 431
GGP N +R+ G P
Sbjct: 238 GGPVNDDVRSPGTP 251
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,900
Number of Sequences: 336
Number of extensions: 4232
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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