Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0617
(697 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 139 2e-33
02_04_0017 + 18937774-18937864,18938505-18940945 139 2e-33
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 137 7e-33
01_06_0662 + 30987187-30987277,30987825-30990214 135 4e-32
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 99 3e-21
03_05_0511 + 25056018-25059107 73 2e-13
02_04_0148 - 20198407-20201424 62 5e-10
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 33 0.16
04_01_0330 - 4369326-4370852 30 2.0
06_01_0673 - 4908496-4908563,4908646-4908712,4908821-4908922,490... 29 2.7
11_01_0513 - 3977031-3977328,3977425-3977469,3977553-3977629,397... 29 3.5
09_06_0142 - 21107878-21109104 29 3.5
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 29 4.7
10_01_0323 + 3530246-3530446,3531091-3531726,3531860-3532018,353... 28 8.1
02_05_1324 - 35702184-35702267,35702405-35702476,35702675-357027... 28 8.1
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 28 8.1
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 139 bits (337), Expect = 2e-33
Identities = 62/82 (75%), Positives = 71/82 (86%)
Frame = +2
Query: 11 KGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTR 190
KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+RG+ F + DV LH DAIHRGGGQ+IPT R
Sbjct: 652 KGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTAR 711
Query: 191 RCLYACLLTAQPRLMEPVYLCE 256
R +YA LTA+PRL+EPVYL E
Sbjct: 712 RVIYASQLTAKPRLLEPVYLVE 733
Score = 125 bits (301), Expect = 4e-29
Identities = 59/98 (60%), Positives = 73/98 (74%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQA 435
IQ PE A+GGIYGVLN++RGHVFEE Q GTP++ +KAYLPV ESFGF++ LR+ T GQA
Sbjct: 734 IQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQA 793
Query: 436 FPQCVFDHWQVLPGDPCEPQSKPYTL---YRKRERGKD 540
FPQCVFDHW ++ DP E S+ L RKR+ K+
Sbjct: 794 FPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRKGLKE 831
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 480 PVRTSEQALHVVQETRKRKGLKE 548
P+ S QA +V + RKRKGLKE
Sbjct: 809 PLEVSSQANQLVLDIRKRKGLKE 831
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 139 bits (337), Expect = 2e-33
Identities = 62/82 (75%), Positives = 71/82 (86%)
Frame = +2
Query: 11 KGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTR 190
KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+RG+ F + DV LH DAIHRGGGQ+IPT R
Sbjct: 652 KGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTAR 711
Query: 191 RCLYACLLTAQPRLMEPVYLCE 256
R +YA LTA+PRL+EPVYL E
Sbjct: 712 RVIYASQLTAKPRLLEPVYLVE 733
Score = 127 bits (306), Expect = 1e-29
Identities = 57/94 (60%), Positives = 71/94 (75%)
Frame = +1
Query: 256 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQA 435
IQ PE A+GGIYGVLN++RGHVFEE Q GTP++ +KAYLPV ESFGF++ LR+ T GQA
Sbjct: 734 IQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQA 793
Query: 436 FPQCVFDHWQVLPGDPCEPQSKPYTLYRKRERGK 537
FPQCVFDHW ++ DP E S+ TL + + K
Sbjct: 794 FPQCVFDHWDMMTSDPLEAGSQASTLVQDIRKRK 827
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 480 PVRTSEQALHVVQETRKRKGLKE 548
P+ QA +VQ+ RKRKGLKE
Sbjct: 809 PLEAGSQASTLVQDIRKRKGLKE 831
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 137 bits (332), Expect = 7e-33
Identities = 62/87 (71%), Positives = 73/87 (83%)
Frame = +2
Query: 11 KGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTR 190
KGVQYL+EIKDSVVAGFQWA+KEG +AEEN+RGV F + DVTLH+D+IHRGGGQ+IPT R
Sbjct: 662 KGVQYLSEIKDSVVAGFQWASKEGALAEENMRGVCFELCDVTLHSDSIHRGGGQLIPTAR 721
Query: 191 RCLYACLLTAQPRLMEPVYLCEFSVLK 271
R +YA LTA PRLMEP+Y + V K
Sbjct: 722 RAMYAAQLTASPRLMEPMYQVDIQVPK 748
Score = 104 bits (249), Expect = 8e-23
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQA 435
IQ P+ AVG +YGVLN R G + EES+ GTP+ ++ YLPV +SF FT LR+ T GQA
Sbjct: 744 IQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNLRFYLPVAKSFDFTEKLRAETSGQA 803
Query: 436 FPQCVFDHWQVLPGDPCEPQS---KPYTLYRKRERGKD 540
FPQC+F HWQ + DP + S K T RKR+ KD
Sbjct: 804 FPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLKD 841
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 135 bits (326), Expect = 4e-32
Identities = 63/84 (75%), Positives = 72/84 (85%), Gaps = 2/84 (2%)
Frame = +2
Query: 11 KGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRG--VRFNIYDVTLHTDAIHRGGGQIIPT 184
KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+RG + F + DV LH+DAIHRGGGQIIPT
Sbjct: 648 KGVQYLNEIKDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHSDAIHRGGGQIIPT 707
Query: 185 TRRCLYACLLTAQPRLMEPVYLCE 256
RR +YA LTA+PRL+EPVYL E
Sbjct: 708 ARRVIYAAQLTAKPRLLEPVYLVE 731
Score = 122 bits (295), Expect = 2e-28
Identities = 57/94 (60%), Positives = 70/94 (74%)
Frame = +1
Query: 256 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQA 435
IQ PE A+GGIY VLN++RGHVFEE Q GTP++ +KAYLPV ESFGFT+ LR+ T GQA
Sbjct: 732 IQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFTSTLRAATSGQA 791
Query: 436 FPQCVFDHWQVLPGDPCEPQSKPYTLYRKRERGK 537
FP VFDHW++L DP EP ++ TL RG+
Sbjct: 792 FPLFVFDHWEMLSVDPLEPGTRQLTLSWISARGR 825
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 99.1 bits (236), Expect = 3e-21
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +2
Query: 26 LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYA 205
LN +KDS+V GFQW A+EG + +E +R V+F I + + + +HRGGGQIIPT RR +Y+
Sbjct: 783 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPLHRGGGQIIPTARRVVYS 842
Query: 206 CLLTAQPRLMEPVYLCE 256
L A PRLMEPVY E
Sbjct: 843 AFLMANPRLMEPVYYIE 859
Score = 97.9 bits (233), Expect = 7e-21
Identities = 45/78 (57%), Positives = 55/78 (70%)
Frame = +1
Query: 256 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQA 435
IQ P V IY VL+RRRGHV + GTP+++VKA+LPV ESFGF DLR +T GQA
Sbjct: 860 IQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVKAFLPVIESFGFETDLRYHTQGQA 919
Query: 436 FPQCVFDHWQVLPGDPCE 489
F VFDHW ++PGDP +
Sbjct: 920 FCLSVFDHWAIVPGDPLD 937
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/73 (46%), Positives = 43/73 (58%)
Frame = +1
Query: 265 PEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQ 444
P +G Y VL+R+R V +E GT +F V AYLPV ES GF+ +LRS T G A
Sbjct: 900 PTEQLGATYAVLSRKRARVLKEEMQEGTSLFTVHAYLPVAESVGFSNELRSVTAGAASAL 959
Query: 445 CVFDHWQVLPGDP 483
V HW+ +P DP
Sbjct: 960 LVLSHWEAIPEDP 972
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Frame = +2
Query: 35 IKDSVVAGFQWAAKEGVMAEENLRGVRFNI--YDVTLHTDAIHRG------GGQIIPTTR 190
+++ +V+GFQ A G + +E + G+ F + Y H+DA + GQ+I +
Sbjct: 815 LRNCIVSGFQLATNAGPLCDEPMWGLVFVVEPYIFCDHSDAANHSEQYNIFSGQVITAVK 874
Query: 191 RCLYACLLTAQPRLMEPVYLCEFS 262
++ +PRL+E +Y CE +
Sbjct: 875 EACREAVVQNKPRLVEAMYFCELT 898
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/73 (41%), Positives = 38/73 (52%)
Frame = +1
Query: 265 PEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQ 444
P +G +Y VL R V +E GT +F V AYL V ES F+ LR+ T G A
Sbjct: 876 PTEQLGSMYAVLGNCRARVLKEEMQEGTSLFTVHAYLSVAESSEFSKKLRNATAGAASAL 935
Query: 445 CVFDHWQVLPGDP 483
F HW+ +P DP
Sbjct: 936 LAFSHWETVPQDP 948
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Frame = +2
Query: 35 IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTL---------HTDAIHRGGGQIIPTT 187
+K+S+ GFQ A G + E G+ F + L +D GQII
Sbjct: 790 VKNSIATGFQLATNAGPLCGEPTWGLIFLVKPYILPDSADASNNQSDHYSTFSGQIITAV 849
Query: 188 RRCLYACLLTAQPRLMEPVYLCEFS 262
R A +L ++PRL+EP+Y CE +
Sbjct: 850 REACQAAILESKPRLVEPMYFCELT 874
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 256 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQ 432
++ P G + G +N+R+G + Q +V ++P+N FG++ LRS T G+
Sbjct: 682 LKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLNNMFGYSTALRSMTQGK 738
>04_01_0330 - 4369326-4370852
Length = 508
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 183 VGMIWPPPLWMASVWSVTS 127
+G IWPPP+W S TS
Sbjct: 487 IGKIWPPPVWFKRCTSATS 505
>06_01_0673 -
4908496-4908563,4908646-4908712,4908821-4908922,
4909006-4909119,4909510-4909683,4909769-4910200,
4910855-4911295
Length = 465
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +2
Query: 389 RSVLLPICVPTPADRPSRSAYSTIGRSSLETRANLRA---SPTRCTGNEKEERIEGRSPR 559
+S+LLP A P R GR+S+ RA+ A +P R T K I G
Sbjct: 2 QSLLLPTFAAASAAPPRRGRVPPAGRASVSVRASASAAAVAPRRETDPRKRVVITGMG-- 59
Query: 560 LNSIFGQIVN 589
L S+FG V+
Sbjct: 60 LVSVFGNDVD 69
>11_01_0513 -
3977031-3977328,3977425-3977469,3977553-3977629,
3977734-3977850,3978012-3978188,3978282-3978379,
3978478-3978544,3978651-3978741,3978847-3978939,
3979049-3979380,3979938-3980189
Length = 548
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 416 PTPADRPSRSAYSTIGRSSL-ETRANLRASPTRCTGNEKEERIE--GRSPRLNSIFGQIV 586
P PA + ++A G+ + E ++R + +GN E+ E +SP L ++ G I
Sbjct: 68 PPPASK--KTALLDKGKEKVSEMDTSVRRTSKGISGNPSEDSNEPVAKSPTLKTVIGSIR 125
Query: 587 NYIVKAN*KNVSI 625
NYI + + I
Sbjct: 126 NYIATKKGRKIKI 138
>09_06_0142 - 21107878-21109104
Length = 408
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 510 RVGLALRFARVSREDLPMVEYALREGLS-AGVGTQIGSKTER 388
+V L L++ E LP++ A REG++ AGV +GS R
Sbjct: 170 KVDLGLKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASR 211
>11_06_0768 +
27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 386 SRSVLLPICVPTPADRPSRSAYSTIGRSSLETRANLRASPT 508
S S +P +P P D PS+ +T G S+ +N SP+
Sbjct: 19 STSARVPGVIPKPIDLPSQRGTATQGDKSMPPASNAWGSPS 59
>10_01_0323 +
3530246-3530446,3531091-3531726,3531860-3532018,
3532276-3532569,3557747-3557941,3558875-3559095,
3559190-3559373,3559797-3559973,3561319-3561824,
3561880-3562060
Length = 917
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 133 YIIDVESNTTQILFSHNSFLSGPLESSHNRVLN 35
Y I++ I+ S+N L G LES H+R L+
Sbjct: 644 YAINIAHRRVDIMDSNNYNLIGTLESDHHRALS 676
>02_05_1324 -
35702184-35702267,35702405-35702476,35702675-35702740,
35702826-35702857,35702941-35703100,35703254-35703389,
35703453-35703598,35703827-35704072,35704152-35704259,
35704436-35704557,35704730-35704820,35704903-35705133,
35705212-35705355,35705875-35705951,35706158-35706281,
35706368-35706535,35706625-35706948
Length = 776
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = +2
Query: 68 AAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVY 247
AAK +LR +RF D+ LHT G I RR + A L E +
Sbjct: 626 AAKNFRAGTFSLRQIRFASVDMELHTTYDPNGSLSIYDVDRRVAERTQVLAP--LPEDKF 683
Query: 248 LCEFS 262
LC FS
Sbjct: 684 LCSFS 688
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 88 HNSFLSGPLESSHNRVLNFIEVLNSF 11
HN L+ +E+SH VL FI +L SF
Sbjct: 183 HNGNLTNRMETSHEEVLPFIFLLLSF 208
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,454,686
Number of Sequences: 37544
Number of extensions: 472099
Number of successful extensions: 1270
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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