Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0615
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.3  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   7.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.1  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   7.1  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 577 IFVFGFQISIVCFGLTVAITITFHFFRRW 663
           + +F  + S+ CF   V +  TF+  R W
Sbjct: 66  VLMFFKEASLYCFNYYVIVVTTFYKRRTW 94


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
 Frame = -3

Query: 680 SQPLNHHLRKKWKVI-----VIATVNPKHT 606
           S  +NH L+K+ K+I     V+AT N  HT
Sbjct: 3   SVAINHSLKKRLKIITIVILVVATGNIIHT 32


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 456 ISFIKNYNFD 485
           I+FIK YNFD
Sbjct: 282 ITFIKQYNFD 291


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -3

Query: 149 NIFITILFLIKHLLLSRFI*HLSREEYKITQTFY 48
           ++F+T++ L +H   + F   L  E   +++TFY
Sbjct: 82  HVFVTMMTLKRHKWSTLFEILLKLESKDLSRTFY 115


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 21  FFLYLFS*IVKCLRNFV 71
           +F+Y+F  + KCL  FV
Sbjct: 296 YFIYMFVSVWKCLLFFV 312


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 21  FFLYLFS*IVKCLRNFV 71
           +F+Y+F  + KCL  FV
Sbjct: 296 YFIYMFVSVWKCLLFFV 312


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 21  FFLYLFS*IVKCLRNFV 71
           +F+Y+F  + KCL  FV
Sbjct: 296 YFIYMFVSVWKCLLFFV 312


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 21  FFLYLFS*IVKCLRNFV 71
           +F+Y+F  + KCL  FV
Sbjct: 296 YFIYMFVSVWKCLLFFV 312


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 582 RVWVSDINCMFWIDSSYNNNFPFF 653
           +V V D  C +  +SSY  N P F
Sbjct: 188 QVVVKDETCQYDTESSYQFNDPQF 211


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 606 CMFWIDSSYN 635
           C+ W+D SYN
Sbjct: 395 CLSWLDLSYN 404


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 582 RVWVSDINCMFWIDSSYNNNFPFF 653
           +V V D  C +  +SSY  N P F
Sbjct: 208 QVVVKDETCQYDTESSYQFNDPQF 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,924
Number of Sequences: 336
Number of extensions: 2614
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)