Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0614
         (660 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKP6 Cluster: Putative uncharacterized protein; n=1; ...    33   4.6  
UniRef50_A5FEV0 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_Q8IKP6 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1469

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +3

Query: 192  ILITQFXKRYRCTKMHKNAKLRTEFKIT--LNNSSESFQFSNTFLKLATLXNYF*ILKYE 365
            IL+ +  K+    K+ +N K++TE KI+    N  E +Q  NT +KLAT  N     KY+
Sbjct: 902  ILVEKLKKKIDNLKI-ENEKIKTELKISNEYRNKLEVYQ-QNTIMKLATTVNKKKNQKYK 959

Query: 366  SGDF 377
            S +F
Sbjct: 960  SKNF 963


>UniRef50_A5FEV0 Cluster: Putative uncharacterized protein; n=1;
           Flavobacterium johnsoniae UW101|Rep: Putative
           uncharacterized protein - Flavobacterium johnsoniae
           UW101
          Length = 548

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 533 PFVTKVNVEKLFYGSVKSGRKAFPREFVYEGSAVAMEW 646
           PF+TK+  E+ F G++K G+K    +   E  A A +W
Sbjct: 497 PFITKMTFERTFSGNIKEGKKERTDKRKSEERAKAQKW 534


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,631,960
Number of Sequences: 1657284
Number of extensions: 11496489
Number of successful extensions: 21541
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21541
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)