Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0613
         (695 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060458-1|AAL25497.1|  114|Drosophila melanogaster SD03042p pro...    63   4e-10
AF220362-1|AAF37263.1|  106|Drosophila melanogaster thioredoxin ...    63   4e-10
AE014134-1667|AAN10701.1|  106|Drosophila melanogaster CG31884-P...    63   4e-10
AE014134-1666|AAN10700.1|  106|Drosophila melanogaster CG31884-P...    63   4e-10
AJ507731-1|CAD45644.1|  157|Drosophila melanogaster thioredoxinT...    50   3e-06
AE014298-718|AAF46018.2|  157|Drosophila melanogaster CG3315-PA ...    50   3e-06
BT023024-1|AAY55440.1|  139|Drosophila melanogaster IP04051p pro...    43   3e-04
BT022989-1|AAY55405.1|  139|Drosophila melanogaster IP04151p pro...    43   3e-04
AE014296-2414|AAF49714.1|  139|Drosophila melanogaster CG13473-P...    43   3e-04
AY089550-1|AAL90288.1|  287|Drosophila melanogaster LD26837p pro...    40   0.004
AF143404-1|AAF66635.1|  287|Drosophila melanogaster thioredoxin-...    40   0.004
AE014296-996|AAF50750.1|  287|Drosophila melanogaster CG5495-PA ...    40   0.004
L27072-1|AAA28937.1|  107|Drosophila melanogaster thioredoxin-li...    38   0.017
AE014298-719|AAF46019.1|  107|Drosophila melanogaster CG4193-PA ...    38   0.017
AY051709-1|AAK93133.1|  416|Drosophila melanogaster LD24756p pro...    31   1.1  
AE014298-1673|AAF48082.2|  416|Drosophila melanogaster CG1837-PA...    31   1.1  
AY070811-1|AAL48433.1|  145|Drosophila melanogaster AT22380p pro...    30   3.5  
AE013599-2952|AAF57518.2|  145|Drosophila melanogaster CG8517-PA...    30   3.5  

>AY060458-1|AAL25497.1|  114|Drosophila melanogaster SD03042p
           protein.
          Length = 114

 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +3

Query: 9   DSIXXXXXXXXECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 140
           D++        ECEDIA EYNI+SMPTFVF+KNG K++EF+GAN
Sbjct: 59  DNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGAN 102


>AF220362-1|AAF37263.1|  106|Drosophila melanogaster thioredoxin
           protein.
          Length = 106

 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +3

Query: 9   DSIXXXXXXXXECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 140
           D++        ECEDIA EYNI+SMPTFVF+KNG K++EF+GAN
Sbjct: 51  DNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGAN 94


>AE014134-1667|AAN10701.1|  106|Drosophila melanogaster CG31884-PB,
           isoform B protein.
          Length = 106

 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +3

Query: 9   DSIXXXXXXXXECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 140
           D++        ECEDIA EYNI+SMPTFVF+KNG K++EF+GAN
Sbjct: 51  DNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGAN 94


>AE014134-1666|AAN10700.1|  106|Drosophila melanogaster CG31884-PA,
           isoform A protein.
          Length = 106

 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +3

Query: 9   DSIXXXXXXXXECEDIASEYNINSMPTFVFVKNGKKLDEFSGAN 140
           D++        ECEDIA EYNI+SMPTFVF+KNG K++EF+GAN
Sbjct: 51  DNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGAN 94


>AJ507731-1|CAD45644.1|  157|Drosophila melanogaster thioredoxinT
           protein.
          Length = 157

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 22/35 (62%), Positives = 25/35 (71%)
 Frame = +3

Query: 42  ECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 146
           E EDI  EYN+NSMPTFVF+K G  L+ F G N D
Sbjct: 62  ENEDITVEYNVNSMPTFVFIKGGNVLELFVGCNSD 96


>AE014298-718|AAF46018.2|  157|Drosophila melanogaster CG3315-PA
           protein.
          Length = 157

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 22/35 (62%), Positives = 25/35 (71%)
 Frame = +3

Query: 42  ECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 146
           E EDI  EYN+NSMPTFVF+K G  L+ F G N D
Sbjct: 62  ENEDITVEYNVNSMPTFVFIKGGNVLELFVGCNSD 96


>BT023024-1|AAY55440.1|  139|Drosophila melanogaster IP04051p
           protein.
          Length = 139

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = +3

Query: 42  ECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 146
           E ED+A +Y +NSMPTF+ +KN   L +F G NV+
Sbjct: 69  ENEDLAVQYEVNSMPTFLIIKNRVTLIQFVGGNVE 103


>BT022989-1|AAY55405.1|  139|Drosophila melanogaster IP04151p
           protein.
          Length = 139

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = +3

Query: 42  ECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 146
           E ED+A +Y +NSMPTF+ +KN   L +F G NV+
Sbjct: 69  ENEDLAVQYEVNSMPTFLIIKNRVTLIQFVGGNVE 103


>AE014296-2414|AAF49714.1|  139|Drosophila melanogaster CG13473-PA
           protein.
          Length = 139

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = +3

Query: 42  ECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 146
           E ED+A +Y +NSMPTF+ +KN   L +F G NV+
Sbjct: 69  ENEDLAVQYEVNSMPTFLIIKNRVTLIQFVGGNVE 103


>AY089550-1|AAL90288.1|  287|Drosophila melanogaster LD26837p
           protein.
          Length = 287

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 14/35 (40%), Positives = 25/35 (71%)
 Frame = +3

Query: 42  ECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 146
           +C+D A+   +++MPTF+F +N  K+D   GA+V+
Sbjct: 62  KCQDTAAGQGVSAMPTFIFYRNRTKIDRVQGADVN 96


>AF143404-1|AAF66635.1|  287|Drosophila melanogaster
           thioredoxin-like protein TXL protein.
          Length = 287

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 14/35 (40%), Positives = 25/35 (71%)
 Frame = +3

Query: 42  ECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 146
           +C+D A+   +++MPTF+F +N  K+D   GA+V+
Sbjct: 62  KCQDTAAGQGVSAMPTFIFYRNRTKIDRVQGADVN 96


>AE014296-996|AAF50750.1|  287|Drosophila melanogaster CG5495-PA
           protein.
          Length = 287

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 14/35 (40%), Positives = 25/35 (71%)
 Frame = +3

Query: 42  ECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 146
           +C+D A+   +++MPTF+F +N  K+D   GA+V+
Sbjct: 62  KCQDTAAGQGVSAMPTFIFYRNRTKIDRVQGADVN 96


>L27072-1|AAA28937.1|  107|Drosophila melanogaster thioredoxin-like
           protein protein.
          Length = 107

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = +3

Query: 48  EDIASEYNINSMPTFVFVKNGKKLDEFSGAN 140
           E++   Y + SMPTFVF++  ++L  F+GA+
Sbjct: 63  EELTERYKVRSMPTFVFLRQNRRLASFAGAD 93


>AE014298-719|AAF46019.1|  107|Drosophila melanogaster CG4193-PA
           protein.
          Length = 107

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = +3

Query: 48  EDIASEYNINSMPTFVFVKNGKKLDEFSGAN 140
           E++   Y + SMPTFVF++  ++L  F+GA+
Sbjct: 63  EELTERYKVRSMPTFVFLRQNRRLASFAGAD 93


>AY051709-1|AAK93133.1|  416|Drosophila melanogaster LD24756p
           protein.
          Length = 416

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 9/28 (32%), Positives = 21/28 (75%)
 Frame = +3

Query: 54  IASEYNINSMPTFVFVKNGKKLDEFSGA 137
           I  ++ +   PT +++++GKK++++SGA
Sbjct: 230 ICQDFEVKGYPTLLWIEDGKKIEKYSGA 257


>AE014298-1673|AAF48082.2|  416|Drosophila melanogaster CG1837-PA
           protein.
          Length = 416

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 9/28 (32%), Positives = 21/28 (75%)
 Frame = +3

Query: 54  IASEYNINSMPTFVFVKNGKKLDEFSGA 137
           I  ++ +   PT +++++GKK++++SGA
Sbjct: 230 ICQDFEVKGYPTLLWIEDGKKIEKYSGA 257


>AY070811-1|AAL48433.1|  145|Drosophila melanogaster AT22380p
           protein.
          Length = 145

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 51  DIASEYNINSMPTFVFVKNGKKLDEFSG 134
           ++A +YN+ S+P+ V + NGK ++   G
Sbjct: 93  ELALDYNVGSVPSLVVISNGKVVNRMVG 120


>AE013599-2952|AAF57518.2|  145|Drosophila melanogaster CG8517-PA
           protein.
          Length = 145

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 51  DIASEYNINSMPTFVFVKNGKKLDEFSG 134
           ++A +YN+ S+P+ V + NGK ++   G
Sbjct: 93  ELALDYNVGSVPSLVVISNGKVVNRMVG 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,439,287
Number of Sequences: 53049
Number of extensions: 472444
Number of successful extensions: 894
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)