Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0611
(702 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 93 5e-20
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 44 2e-05
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 41 1e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 41 1e-04
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 35 0.010
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 32 0.091
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 31 0.12
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 30 0.28
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 29 0.49
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 28 1.5
SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c... 27 2.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.4
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 26 6.0
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 92.7 bits (220), Expect = 5e-20
Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Frame = +2
Query: 2 YRASYFGFYDTARGM-LPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRA 178
YR YFG YDT + + L P + S+ + VTT +G+ SYP DT+RRRMMM SG A
Sbjct: 208 YRGLYFGMYDTLKPVVLVGPLEGNFLASFLLGWAVTTGSGVASYPLDTIRRRMMMTSGEA 267
Query: 179 KSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGTGGAFVLVLYDEIKKVL 337
+ Y ++ C I EG KGA +N+LRG GA VL +YD+++ ++
Sbjct: 268 ---VKYSSSFECGRQILAKEGARSFFKGAGANILRGVAGAGVLSIYDQVQLLM 317
Score = 27.5 bits (58), Expect = 2.0
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +2
Query: 47 LPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRAKSDIL---YKNTIHCW 217
+ + KN+ + + V+ + P + V+ + Q ++ L YK C+
Sbjct: 19 ITETKNSTFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECF 78
Query: 218 ATIAKTEGTSGLLKGAFSNVLR 283
A EG L +G +NVLR
Sbjct: 79 KRTAAEEGVISLWRGNTANVLR 100
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 44.4 bits (100), Expect = 2e-05
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Frame = +2
Query: 2 YRASYFGFYDTARGML-PDPKNTPIVISWAIAQTVTTVAG-IXSYPFDTVRRRMMMQSGR 175
+ A YFG R L P + + IA T+ + G S PFD ++ R+
Sbjct: 174 WNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVPRI 233
Query: 176 AKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLR-GTGGAFVLVLYDEI 325
A Y T+A+ EG + L KG VLR G GG +LV+++ +
Sbjct: 234 AGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGILLVVFNSV 284
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/73 (31%), Positives = 31/73 (42%)
Frame = +2
Query: 62 NTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG 241
N P +++A + YP D V+ RM + G KSD Y T C I K EG
Sbjct: 5 NIPFPVTFAAGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDCLKKIVKNEG 60
Query: 242 TSGLLKGAFSNVL 280
L +G +L
Sbjct: 61 PHRLYRGILPPIL 73
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 41.1 bits (92), Expect = 1e-04
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = +2
Query: 11 SYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRAKSDI 190
+Y + + LP + V ++ + + + P DTV+ RM QS A +
Sbjct: 183 AYNSIKQSLQSRLPPDEKLSTVTTFLVGSVAGIITVYCTQPIDTVKSRM--QSLSASKE- 239
Query: 191 LYKNTIHCWATIAKTEGTSGLLKGAFSNVLR-GTGGAFVLVLYDEIKKVL 337
YKN+IHC I +G GA + R G V +Y+++ ++L
Sbjct: 240 -YKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEIL 288
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 41.1 bits (92), Expect = 1e-04
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Frame = +2
Query: 20 GFYDTARG-----MLPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGR--A 178
GFY+ R L DPK + I+ A + PF V+ RM S +
Sbjct: 106 GFYEPIRRTLNTWFLDDPKGNKLAINVASGAGSGLCGALFGSPFFLVKTRMQSYSPKFPV 165
Query: 179 KSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGTGGAFV-LVLYDEIKKVL 337
YK+ + ++ I K G GL GA + +LR G+ V L +Y+ K+++
Sbjct: 166 GQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMI 219
Score = 31.5 bits (68), Expect = 0.12
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +2
Query: 134 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLR 283
FDTV RM Q K+ LYKN I C ++EG L KG +++ R
Sbjct: 250 FDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLAR 295
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 35.1 bits (77), Expect = 0.010
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 8 ASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRAKSD 187
A YF + + + + P+ + A A +T ++ PFD +++RM + S +
Sbjct: 93 AIYFSVLEFFKSKINASPDRPLASALAGACAIT-ISDAFMTPFDVIKQRMQLPSRK---- 147
Query: 188 ILYKNTIHCWATIAKTEG 241
YK+ +HC T+ + EG
Sbjct: 148 --YKSALHCATTVFRNEG 163
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 31.9 bits (69), Expect = 0.091
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 86 AIAQTVTTVAGIXSYPFDTVRRRMMM--QSGRAKSDILYKNTIHCWATIAKTEGTSGLLK 259
AIA +T+ A + P V+ R+ + +SG+A Y+++I C + EG GL K
Sbjct: 170 AIAGVITSAA---TNPIWLVKTRLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYK 223
Query: 260 GAFSNVLRGTGGAFVLVLYDEIK 328
G +++L VLY++ K
Sbjct: 224 GLSASLLGVGESTLQWVLYEKFK 246
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 31.5 bits (68), Expect = 0.12
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +2
Query: 32 TARGMLPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRAKSDILYKNTIH 211
+ +G +P +N V+S I+ T + PFD ++ R+ ++ +YKN +H
Sbjct: 201 SVQGTVPH-RNIVNVMSGLISGATATAI---TNPFDMLKTRVQLEPH------IYKNFLH 250
Query: 212 CWATIAKTEGTSGLLKGAFSNVLR 283
+ EG G L G F VLR
Sbjct: 251 SAKLVYANEGFRGFLDGFFLRVLR 274
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.3 bits (65), Expect = 0.28
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 131 PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGTGG-AFVL 307
P + VR R+ +Q+G+ ++LY C I+ G SG++KG R G
Sbjct: 132 PVEHVRIRLQIQTGK---NVLYHGPWDCIKKISSQYGLSGIMKGYNPTAAREAHGLGMYF 188
Query: 308 VLYDEIKK 331
+ Y+ + K
Sbjct: 189 LAYEALVK 196
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 29.5 bits (63), Expect = 0.49
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 125 SYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLR 283
++P D +RRR + YKN I KTEG +G +G SN+L+
Sbjct: 244 TFPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 169 WSCQERYPVQEHHPLLGYHCQDRGNLGPSQGSLLQRPQRYWW 294
WS RY + HH ++ Y + G+ Q S L+ P + W+
Sbjct: 908 WSQSSRYGWKGHHIMVQYWSELTGSSNYMQESDLEYPYKRWF 949
>SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 579
Score = 27.5 bits (58), Expect = 2.0
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +1
Query: 487 CFIKCYIMLVLTEVNFSNFDISIAF 561
CFIKC ++L+L+ N+S + ++ +
Sbjct: 99 CFIKCLLLLILSLGNYSPYSRNLLY 123
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 312 KTSTKAPPVPLRTLEKAPLRRP 247
K S+KAPPVPL + + P+ P
Sbjct: 1016 KLSSKAPPVPLPSADAPPIPVP 1037
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 41 GMLPDPKNTPIVISWAIAQTVTTV 112
GMLPDPK+ P++ +T V
Sbjct: 89 GMLPDPKSIPVISQALTKYKITDV 112
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,641,670
Number of Sequences: 5004
Number of extensions: 49546
Number of successful extensions: 156
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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