Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0611
(702 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 116 2e-26
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 88 6e-18
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 87 1e-17
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 82 5e-16
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 46 3e-05
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 45 7e-05
03_05_1041 - 29884975-29885107,29885485-29885552,29885652-298858... 44 1e-04
03_02_0646 + 10141967-10142476,10143721-10144254 42 4e-04
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 42 4e-04
07_01_1210 - 11538233-11538349,11538532-11538612,11538697-115387... 41 8e-04
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 41 8e-04
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 38 0.006
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 38 0.008
08_02_1016 - 23606089-23607072 37 0.013
09_04_0437 - 17587944-17588909 36 0.031
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 36 0.041
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 35 0.072
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 35 0.072
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 34 0.13
01_07_0386 + 43218686-43218745,43218972-43219190,43219307-432193... 33 0.22
09_04_0628 + 19093665-19094033,19094408-19094722 33 0.29
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 33 0.29
07_03_0117 + 13589997-13590998 30 1.5
05_03_0427 - 13886814-13887935 30 1.5
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 30 2.0
01_03_0308 - 14883728-14884120 29 3.6
10_08_0185 + 15578607-15578845,15580422-15580536,15580656-155807... 29 4.7
05_03_0038 + 7612866-7613132,7615691-7616608 28 6.2
03_02_0469 + 8720119-8720199,8720295-8720372,8720496-8720570,872... 28 6.2
02_05_1331 + 35736543-35736638,35737407-35737525,35737670-357377... 28 6.2
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 28 8.3
02_01_0218 + 1433310-1435620,1435672-1435951,1436461-1436524,143... 28 8.3
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 116 bits (278), Expect = 2e-26
Identities = 55/112 (49%), Positives = 74/112 (66%)
Frame = +2
Query: 2 YRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRAK 181
+R YFG +DTA+ ++ P ++P+ W AQ VT++AG+ SYP DTVRRRMMMQSG
Sbjct: 228 HRGLYFGGFDTAKDVMV-PLDSPLWQRWVTAQAVTSMAGLISYPLDTVRRRMMMQSGMDV 286
Query: 182 SDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGTGGAFVLVLYDEIKKVL 337
+Y +T+ CW I K EG +GA SN+ R TG A +LVLYDE+KK +
Sbjct: 287 Q--MYSSTLDCWRKIYKVEGIKSFYRGALSNMFRSTGAAAILVLYDEVKKFM 336
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 88.2 bits (209), Expect = 6e-18
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 YRASYFGFYDTARGM-LPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRA 178
YR YFG YDT + + L P S+A+ +TT +G +YPFDT+RRRMM+ SG+
Sbjct: 204 YRGLYFGIYDTMKPLILVGPLQENFFASFALGWAITTFSGACAYPFDTLRRRMMLTSGQ- 262
Query: 179 KSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGTGGAFVLVLYDEIKK 331
+ YKN H I TEG L +G +N+L G GA VL YD++ +
Sbjct: 263 --PLKYKNAFHAAKQIVSTEGFFTLFRGVGANILSGMAGAGVLAGYDQLHR 311
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 87.4 bits (207), Expect = 1e-17
Identities = 47/110 (42%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 YRASYFGFYDTARGM-LPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRA 178
YR YFG YD+ + + L S+A+ +T AG+ SYP DTVRRRMMM SG A
Sbjct: 263 YRGLYFGMYDSLKPVVLTGSLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEA 322
Query: 179 KSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGTGGAFVLVLYDEIK 328
+ YK+++ ++ I K EG L KGA +N+LR GA VL YD+++
Sbjct: 323 ---VKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLSGYDQLQ 369
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 81.8 bits (193), Expect = 5e-16
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 2 YRASYFGFYDTARGM-LPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRA 178
YR YFG YD+ + + L + S+ + +T AG+ SYP DTVRRRMMM SG A
Sbjct: 261 YRGLYFGMYDSLKPVVLVGNLQDNFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEA 320
Query: 179 KSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGTGGAFVLVLYDEIKKVL 337
+ Y +++ + I EG L KGA +N+LR GA VL YD+++ V+
Sbjct: 321 ---VKYNSSLDAFKQIVAKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVVV 370
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 158 MMQSGRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLR 283
M++SGR YK C+ K EG L +G +NV+R
Sbjct: 114 MIKSGRLSHP--YKGIADCFGRTIKDEGVIALWRGNTANVIR 153
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +2
Query: 17 FGFYDTARG--MLPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRAKSDI 190
F Y+T R + P ++P++IS A + ++P D VRRRM ++ ++ +
Sbjct: 217 FCVYETLRSHWQIERPYDSPVLISLACGSLSGIASSTITFPLDLVRRRMQLEGAAGRARV 276
Query: 191 LYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGTGG-AFVLVLYDEIKKVL 337
+ I +TE GL +G + V + Y+ +K +L
Sbjct: 277 YQTGLFGTFGHIVRTESLRGLYRGILPEYCKVVPSVGIVFMTYETLKSIL 326
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/94 (28%), Positives = 41/94 (43%)
Frame = +2
Query: 2 YRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRAK 181
Y F FY+T + +P+ I+ A + +YP D VRR+M +Q+ +
Sbjct: 219 YSGLKFYFYETMKTYVPEEHRKDIIAKLACGSVAGLLGQTITYPLDVVRRQMQVQAFSSS 278
Query: 182 SDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLR 283
+ K T A IAK +G L G N L+
Sbjct: 279 NLEKGKGTFGSIAMIAKHQGWRQLFSGLSINYLK 312
>03_05_1041 -
29884975-29885107,29885485-29885552,29885652-29885816,
29886262-29886372,29886999-29887072,29887387-29887480,
29887750-29887849,29888075-29888151,29888856-29888935,
29889025-29889157
Length = 344
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 128 YPFDTVRRRMMMQSGRAKSDIL-YKNTIHCWATIAKTEGTSGLLKGAFSNVLRGT 289
+P D VR R + GR D+ Y+NT H TIA++EG GL G + VL T
Sbjct: 34 HPLDVVRTRFQVSGGRGCYDLPPYRNTAHAVYTIARSEGLRGLYAGFYPAVLGST 88
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 107 TVAGIXSYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLR- 283
T I + PFD V+ R+M Q GR DI YK +H TI EG L KG ++R
Sbjct: 262 TAGPICTGPFDVVKTRLMAQ-GRT-GDIKYKGMVHAIRTIYTEEGLRALWKGLLPRLMRI 319
Query: 284 GTGGAFVLVLYDEI 325
G A + + D++
Sbjct: 320 PPGQAIMWAVADQV 333
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 143 VRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLR-GTGGA 298
V+ R+ Q G + + YK IHC TI EG GL GA V+R GT A
Sbjct: 172 VKIRLQQQKGLSPDLLRYKGPIHCARTIVTEEGLFGLWAGALPTVMRNGTNQA 224
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 131 PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLLKG 262
P D ++ R+ + A Y+ HC T+ ++EG L KG
Sbjct: 59 PIDVIKTRLQLDRSGA-----YRGIAHCGTTVVRSEGVRALWKG 97
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +2
Query: 2 YRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRAK 181
Y A F +D + +P+ + S A A T A + YP DTVRR+M M+
Sbjct: 262 YIAVNFCVFDLMKKSVPEKYKSRPETSLATALLSATFATLMCYPLDTVRRQMQMKGSP-- 319
Query: 182 SDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGTGGAFV-LVLYDEIKKVL 337
Y + I + +G GL +G N L+ + + L +D +K ++
Sbjct: 320 ----YNTVLDAIPGIVERDGLIGLYRGFVPNALKNLPNSSIKLTAFDTVKTLI 368
>07_01_1210 -
11538233-11538349,11538532-11538612,11538697-11538758,
11539108-11539159,11539779-11539868,11539957-11540052,
11540127-11540180,11540314-11540404,11540731-11540807,
11541089-11541171,11541441-11541492
Length = 284
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 110 VAGIXSYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVL-RG 286
+ G + P D ++ R+M+Q G+A Y+ I C TI + EG LKG VL G
Sbjct: 201 ITGAITTPLDVLKTRLMVQ-GQANQ---YRGIISCAQTILREEGAGAFLKGIEPRVLWIG 256
Query: 287 TGGAFVLVLYDEIKKVL 337
GG+ + ++ K +L
Sbjct: 257 IGGSIFFGVLEKTKSIL 273
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 113 AGIXSYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGTG 292
A I +YP + VR ++ Q + Y I C + + EG G +G +N+LR T
Sbjct: 233 ASIITYPHEVVRSKLQEQGRARHGAVHYTGVIDCIKQVYQKEGIPGFYRGCATNLLRTTP 292
Query: 293 GAFV-LVLYDEIKKVL 337
A + Y+ I +++
Sbjct: 293 NAVITFTSYEMINRLM 308
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Frame = +2
Query: 17 FGFYDTARG--MLPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRAKSDI 190
F Y++ R + P+++P V+S + ++P D V+RRM +Q S +
Sbjct: 187 FTVYESLRSHWQMERPQDSPAVVSLFSGSLSGIASSTATFPLDLVKRRMQLQGAAGTSSV 246
Query: 191 LYKNTIHCWATIAKTEGTSGLLKG---AFSNVLRGTGGAFVLVLYDEIKKVL 337
+ I + EG G +G + V+ G AF + Y+ +K +L
Sbjct: 247 CKSSITGTIRQIFQKEGLRGFYRGIVPEYLKVVPSVGIAF--MTYETLKSLL 296
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Frame = +2
Query: 107 TVAGIXSYPFDTVRRRMMM---------QSGRAKSDILYKNTIHCWATIAKTEGTSGLLK 259
T+ +YP D +RRRM M +G K + Y I + + EG L K
Sbjct: 261 TIGQTVAYPLDVIRRRMQMVGWNNAASIVTGEGKEALQYNGMIDAFRKTVRYEGVGALYK 320
Query: 260 GAFSNVLRGTGG-AFVLVLYDEIKKVL 337
G N ++ A V Y+ ++KVL
Sbjct: 321 GLVPNSVKVVPSIAIAFVTYEFVQKVL 347
>08_02_1016 - 23606089-23607072
Length = 327
Score = 37.1 bits (82), Expect = 0.013
Identities = 30/99 (30%), Positives = 42/99 (42%)
Frame = +2
Query: 38 RGMLPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRAKSDILYKNTIHCW 217
RG D T +V S+A VA S P D V+ R+M + Y I C
Sbjct: 226 RGPGADGLGTHVVASFAAG----LVAAAASNPVDVVKTRVMNMKVAPGAPPPYSGAIDCA 281
Query: 218 ATIAKTEGTSGLLKGAFSNVLRGTGGAFVLVLYDEIKKV 334
++EG L KG V R G F +VL+ +++V
Sbjct: 282 LKTVRSEGVMALYKGFIPTVSR--QGPFTVVLFVTLEQV 318
>09_04_0437 - 17587944-17588909
Length = 321
Score = 35.9 bits (79), Expect = 0.031
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 110 VAGIXSYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGT 289
VA S P D V+ R+M A + Y + C ++EG L KG V R
Sbjct: 240 VAASASTPVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKGFVPTVTR-- 297
Query: 290 GGAFVLVLYDEIKKV 334
G F +VL+ +++V
Sbjct: 298 QGPFTIVLFVTLEQV 312
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 35.5 bits (78), Expect = 0.041
Identities = 29/92 (31%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
Frame = +2
Query: 53 DPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGR-AKSDILYKNTIHCWATIA 229
D K P+V I T + P D RM S A YKN H IA
Sbjct: 110 DGKPLPLVQKAGIGLTAGAIGACVGSPADLALIRMQADSTLPAAQSRNYKNAFHALYRIA 169
Query: 230 KTEGTSGLLKGAFSNVLRGTG-GAFVLVLYDE 322
EG L KGA V+R +L YD+
Sbjct: 170 ADEGVLALWKGAGPTVVRAMSLNMGMLASYDQ 201
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 34.7 bits (76), Expect = 0.072
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 131 PFDTVRRRMMMQS-GRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLR-GTGGAFV 304
P +T+R +M+ S G + +++ + +I KTEG +GL +G F NV+R A
Sbjct: 156 PLETIRTHLMVGSNGDSMTEV--------FQSIMKTEGWTGLFRGNFVNVIRVAPSKAIE 207
Query: 305 LVLYDEIKKVL 337
L +D KK L
Sbjct: 208 LFAFDTAKKFL 218
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 34.7 bits (76), Expect = 0.072
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +2
Query: 2 YRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGR-- 175
Y F Y+ + +P+ +V+ + +YP D VRR+M +Q+ +
Sbjct: 210 YAGLKFYIYEDLKSRVPEDYKRSVVLKLSCGALAGLFGQTLTYPLDVVRRQMQVQNKQPH 269
Query: 176 -AKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGTGG-AFVLVLYDEIKKVL 337
A + T A I + +G L G N ++ A YD +K +L
Sbjct: 270 NANDAFRIRGTFQGLALIIRCQGWRQLFAGLSLNYVKVVPSVAIGFTTYDMMKNLL 325
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 191 LYKNTIHCWATIAKTEGTSGLLKGAFSNVLR-GTGGAFVLVLYDEIKKV 334
+Y+N HC + TEG + L KG F+ R G A V+ ++++++
Sbjct: 811 VYRNGFHCGYQVVVTEGVTSLYKGGFATFARLGPQTAITFVVCEKLREL 859
>01_07_0386 +
43218686-43218745,43218972-43219190,43219307-43219391,
43219583-43219713,43219802-43219900,43219984-43220088,
43220190-43220264,43222006-43222092,43222129-43222173
Length = 301
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 131 PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLR 283
P D V+ RMM D YK+T+ C+A K +G KG +N R
Sbjct: 230 PVDVVKSRMM-------GDATYKSTLDCFAKTLKNDGLPAFYKGFIANFCR 273
>09_04_0628 + 19093665-19094033,19094408-19094722
Length = 227
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 205 GVLVQDIALGTTRLHHHAPTDCVEGIGXDTGDCGYG 98
G V+ +ALG LHHHAP D ++ G D + G
Sbjct: 8 GGAVEGLALGIAPLHHHAPCDDLKDDGGDAEEAEDG 43
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/116 (21%), Positives = 43/116 (37%), Gaps = 4/116 (3%)
Frame = +2
Query: 2 YRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMMQSGRAK 181
Y F Y+ + +P+ + + + +YP D VRR+M +QS +
Sbjct: 207 YAGLKFYIYEGLKAHVPEDYKNSVTLKLSCGAAAGLFGQTLTYPLDVVRRQMQVQSQQYH 266
Query: 182 SDI---LYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGTGG-AFVLVLYDEIKKVL 337
+ T I +T+G L G N ++ A YD +K +L
Sbjct: 267 DKFGGPQIRGTFQGLMIIKQTQGWRQLFAGLSLNYIKVVPSVAIGFTAYDTMKSLL 322
>07_03_0117 + 13589997-13590998
Length = 333
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +2
Query: 110 VAGIXSYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLLKG-AFSNVLRG 286
VA +YP D VRR++ + G T+ + I + +G L G + V +
Sbjct: 251 VASTATYPLDVVRRQIQLGGGGG-------GTLQAFRAIVRAQGARQLYAGLGITYVKKV 303
Query: 287 TGGAFVLVLYDEIKKVL 337
A LV YD +K +L
Sbjct: 304 PSTAVGLVAYDYMKSLL 320
>05_03_0427 - 13886814-13887935
Length = 373
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 239 PRSW-QW*PSSGWCSCTGYRSWHDQTASSCAYG 144
PRSW QW P S +C T ++S+ +T YG
Sbjct: 116 PRSWLQWLPWSEYCYNTSFQSFLRETPFKVVYG 148
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 29.9 bits (64), Expect = 2.0
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Frame = +2
Query: 2 YRASYFGFYDTARGML------PDPKNTPIVISWAIAQTVTTVAGIXSYPFDTVRRRMMM 163
++A F YDT R L + N I+ A A T+ I P DT+R RM+
Sbjct: 194 FKAVNFYAYDTYRKQLLKWSGNDETTNFERFIAGAAAGVTATILCI---PMDTIRTRMVA 250
Query: 164 QSGRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVL-RGTGGAFVLVLYDEIK 328
G A + I + +TEG L KG +++ GA +YD +K
Sbjct: 251 PGGEALGGV-----IGVARHMIQTEGFFSLYKGLVPSLISMAPSGAVFYGVYDILK 301
>01_03_0308 - 14883728-14884120
Length = 130
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 174 VPRAISCTRTPSTAGLPLPRPREPRAFSREPSPTSSEVLV 293
+ A S T T +TA LP P P E SR P PT+S ++
Sbjct: 21 IAMAASRTDTGATA-LPSPSPIENSTASRSPFPTTSPSMI 59
>10_08_0185 +
15578607-15578845,15580422-15580536,15580656-15580745,
15581935-15582033,15582154-15582258
Length = 215
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -1
Query: 330 FLISSYKT-STKAPPVPLRTLEKAPLRRPEV 241
FL+S+Y+ + PP+PL +L+ +PL P++
Sbjct: 16 FLLSAYQEYALLLPPLPLPSLKNSPLANPDL 46
>05_03_0038 + 7612866-7613132,7615691-7616608
Length = 394
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 168 LVVPRAISCTRTPSTAGLPLPRPREPRAFS-REPSP 272
L PR+ + PS++ P P P P + + REPSP
Sbjct: 271 LKAPRSSATRDVPSSSTQPPPAPERPASVARREPSP 306
>03_02_0469 +
8720119-8720199,8720295-8720372,8720496-8720570,
8720666-8720796,8720948-8721002,8721107-8721217,
8721538-8721606,8721687-8721794,8722106-8722174,
8722266-8722320,8722499-8722701
Length = 344
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 113 AGIXSYPFDTVRRRMMM-QSGRAKSDILYKNTIHCWATIAKTEGTSGLLKGAFSNVLRGT 289
A + +YP V+ R+ + Q YK T + + EG SGL KG + +++
Sbjct: 248 ATVVTYPLLVVKARLQVKQIIDDDKRHRYKGTFDAITKMIRYEGLSGLYKGMSTKIVQSV 307
Query: 290 -GGAFVLVLYDEIKK 331
A + ++ +E+ K
Sbjct: 308 FASALLFMIKEELVK 322
>02_05_1331 + 35736543-35736638,35737407-35737525,35737670-35737715,
35738117-35738172,35738452-35738547,35738844-35738961,
35739406-35739672,35740023-35740124,35740302-35740659,
35740750-35740863,35741045-35741676,35741895-35742103,
35742597-35742819,35743419-35743538,35743888-35743914,
35744281-35745045,35745431-35748511
Length = 2142
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 238 LGLGNGSPAVDGVLVQDIALGTTRL 164
+G G GS A GV +D+AL TRL
Sbjct: 2090 MGQGGGSAADTGVATRDVALQNTRL 2114
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 180 RAISCTRTPSTAGLPLPRPREPRAFSRE 263
R + T T +T+ LP PREP+ SR+
Sbjct: 489 RRPAATATVATSSASLPAPREPQCHSRQ 516
>02_01_0218 +
1433310-1435620,1435672-1435951,1436461-1436524,
1436557-1436562
Length = 886
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 327 LISSYKTSTKAPPVPLRTLEKAPLRRPEVPSVLAMVA 217
L +++ ST+APP PL L RR + + L VA
Sbjct: 22 LSNTFSASTRAPPPPLPPLSPLLPRRADAATALTPVA 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,969,336
Number of Sequences: 37544
Number of extensions: 350635
Number of successful extensions: 1175
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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