Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0610
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004900-1|AAO47878.1|  573|Drosophila melanogaster LD12639p pro...    45   1e-04
AE014296-1300|AAF50529.1|  573|Drosophila melanogaster CG7492-PA...    45   1e-04
AY061428-1|AAL28976.1|  971|Drosophila melanogaster LD35896p pro...    29   4.7  
AE014297-2451|AAF55502.1|  971|Drosophila melanogaster CG7212-PA...    29   4.7  
M69111-1|AAA73062.1| 1026|Drosophila melanogaster protein ( D.me...    29   8.2  
BT010297-1|AAQ23615.1| 1025|Drosophila melanogaster LD13210p pro...    29   8.2  
AE013599-2612|AAF57752.1| 1026|Drosophila melanogaster CG5753-PA...    29   8.2  

>BT004900-1|AAO47878.1|  573|Drosophila melanogaster LD12639p
           protein.
          Length = 573

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = +2

Query: 11  EERLSVTLRYLASGNSIKSLYFEYLIGTTTLSEIIEHTCKSLWICLQPTYMP-GKTEEDW 187
           EERL++TL+YLA+G       + +      ++E+I + C   +  L+  Y+   KT++ W
Sbjct: 198 EERLAITLKYLATGEVHSCRNYCFRASKFVINEMIANICLGFYEHLKDQYVTLPKTDDQW 257

Query: 188 INIANFYFERTHFPNCLGSI 247
            + A     + + P+C+G++
Sbjct: 258 RSAAEEMERKHNLPHCVGNL 277


>AE014296-1300|AAF50529.1|  573|Drosophila melanogaster CG7492-PA
           protein.
          Length = 573

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = +2

Query: 11  EERLSVTLRYLASGNSIKSLYFEYLIGTTTLSEIIEHTCKSLWICLQPTYMP-GKTEEDW 187
           EERL++TL+YLA+G       + +      ++E+I + C   +  L+  Y+   KT++ W
Sbjct: 198 EERLAITLKYLATGEVHSCRNYCFRASKFVINEMIANICLGFYEHLKDQYVTLPKTDDQW 257

Query: 188 INIANFYFERTHFPNCLGSI 247
            + A     + + P+C+G++
Sbjct: 258 RSAAEEMERKHNLPHCVGNL 277


>AY061428-1|AAL28976.1|  971|Drosophila melanogaster LD35896p
           protein.
          Length = 971

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +3

Query: 459 TRICNIT*L*GSRTFXVVFVGDEAF-PLMEHLMRPYPNRNLSIKQRVYNYSLSYARXTVE 635
           TR C  T L  S+T  V+F  DE   PLM+ L+R +   +  + +     + S    T+E
Sbjct: 745 TRCCAPT-LEISKTAIVMFFKDEGCKPLMQQLLREFIQHSFKLFESTPEQNFSNISDTME 803

Query: 636 CAFGIM 653
             FG +
Sbjct: 804 TFFGCL 809


>AE014297-2451|AAF55502.1|  971|Drosophila melanogaster CG7212-PA
           protein.
          Length = 971

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +3

Query: 459 TRICNIT*L*GSRTFXVVFVGDEAF-PLMEHLMRPYPNRNLSIKQRVYNYSLSYARXTVE 635
           TR C  T L  S+T  V+F  DE   PLM+ L+R +   +  + +     + S    T+E
Sbjct: 745 TRCCAPT-LEISKTAIVMFFKDEGCKPLMQQLLREFIQHSFKLFESTPEQNFSNISDTME 803

Query: 636 CAFGIM 653
             FG +
Sbjct: 804 TFFGCL 809


>M69111-1|AAA73062.1| 1026|Drosophila melanogaster protein (
           D.melanogaster mRNA,complete cds. ).
          Length = 1026

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +1

Query: 364 AIDFGAYGSNSDSSVFKNSNFGKRFLNNQMHLPESATLPDYEEVGPXP 507
           A   G   SNS S++  NSN  ++      HL  S  L   +  GP P
Sbjct: 92  AYHHGNINSNSGSNISSNSNQMQKIRQQHQHLSSSNGLLGNQPPGPPP 139


>BT010297-1|AAQ23615.1| 1025|Drosophila melanogaster LD13210p
           protein.
          Length = 1025

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +1

Query: 364 AIDFGAYGSNSDSSVFKNSNFGKRFLNNQMHLPESATLPDYEEVGPXP 507
           A   G   SNS S++  NSN  ++      HL  S  L   +  GP P
Sbjct: 92  AYHHGNINSNSGSNISSNSNQMQKIRQQHQHLSSSNGLLGNQPPGPPP 139


>AE013599-2612|AAF57752.1| 1026|Drosophila melanogaster CG5753-PA,
           isoform A protein.
          Length = 1026

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +1

Query: 364 AIDFGAYGSNSDSSVFKNSNFGKRFLNNQMHLPESATLPDYEEVGPXP 507
           A   G   SNS S++  NSN  ++      HL  S  L   +  GP P
Sbjct: 92  AYHHGNINSNSGSNISSNSNQMQKIRQQHQHLSSSNGLLGNQPPGPPP 139


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,032,923
Number of Sequences: 53049
Number of extensions: 683513
Number of successful extensions: 1453
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)