Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0608
(705 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 57 1e-10
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 57 1e-10
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 55 8e-10
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 54 2e-09
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 45 8e-07
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 44 1e-06
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 44 1e-06
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 36 4e-04
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 36 4e-04
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 3.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.6
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 8.6
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 57.2 bits (132), Expect = 1e-10
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +3
Query: 276 VVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVP 452
+V+IFL PKYD+ G + L N+M F ++D F L +G N I RNS+E V D VP
Sbjct: 513 MVRIFLGPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESVFVVPDEVP 571
Score = 45.2 bits (102), Expect = 6e-07
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +2
Query: 11 EYIVEFKQYLKPYTQDKLYFDGVKITDVKVDKLTTFFENFEFDASNNCTL 160
+Y ++K+ L YT ++L F GV I V VDKL T+F++FE +N ++
Sbjct: 426 DYYHKYKENLPKYTTEELNFPGVSIESVTVDKLITYFDHFESMLNNGVSI 475
Score = 38.3 bits (85), Expect = 7e-05
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 491 TF*YVGEFCYMPKRLMLPRGTXGGFPFQLFVFVYPFD--NKGKXLAP-FESFVLDNKPLG 661
TF Y + P+RL+LP+G G P+ + V V PFD N + +P + + D + +G
Sbjct: 588 TFKYSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDSNVVQIDSPVWGRHIYDGRAMG 647
Query: 662 XPSGSP 679
P P
Sbjct: 648 FPLDKP 653
Score = 27.5 bits (58), Expect = 0.13
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 196 VKVRQPRLNHSPFNVNIEVD 255
+K RQ RLNH PF +I V+
Sbjct: 486 IKARQYRLNHKPFTYHIVVN 505
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 57.2 bits (132), Expect = 1e-10
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +3
Query: 276 VVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVP 452
+V+IFL PKYD+ G + L N+M F ++D F L +G N I RNS+E V D VP
Sbjct: 513 MVRIFLGPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESVFVVPDEVP 571
Score = 45.2 bits (102), Expect = 6e-07
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +2
Query: 11 EYIVEFKQYLKPYTQDKLYFDGVKITDVKVDKLTTFFENFEFDASNNCTL 160
+Y ++K+ L YT ++L F GV I V VDKL T+F++FE +N ++
Sbjct: 426 DYYHKYKENLPKYTTEELNFPGVSIESVTVDKLITYFDHFESMLNNGVSI 475
Score = 38.3 bits (85), Expect = 7e-05
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 491 TF*YVGEFCYMPKRLMLPRGTXGGFPFQLFVFVYPFD--NKGKXLAP-FESFVLDNKPLG 661
TF Y + P+RL+LP+G G P+ + V V PFD N + +P + + D + +G
Sbjct: 588 TFKYSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDSNVVQIDSPVWGRHIYDGRAMG 647
Query: 662 XPSGSP 679
P P
Sbjct: 648 FPLDKP 653
Score = 27.5 bits (58), Expect = 0.13
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 196 VKVRQPRLNHSPFNVNIEVD 255
+K RQ RLNH PF +I V+
Sbjct: 486 IKARQYRLNHKPFTYHIVVN 505
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 54.8 bits (126), Expect = 8e-10
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +3
Query: 273 AVVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNE 422
AVV++FL PK+D G P+++ N F ELD F L AG+N IIRNS +
Sbjct: 533 AVVRVFLGPKHDHQGRPISISKNQHLFVELDQFIQNLHAGENTIIRNSQQ 582
Score = 27.9 bits (59), Expect = 0.099
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 524 PKRLMLPRGTXGGFPFQLFVFV 589
P RL LP+G GFP Q V +
Sbjct: 622 PARLSLPKGQPQGFPLQFLVVI 643
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 53.6 bits (123), Expect = 2e-09
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +3
Query: 276 VVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVPM 455
+V+IFL PKYD+ G + L N+M F ++D F L +G N I RNS+E VP
Sbjct: 139 MVRIFLGPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESXFVVPTRVPA 198
Query: 456 T 458
T
Sbjct: 199 T 199
Score = 45.2 bits (102), Expect = 6e-07
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +2
Query: 11 EYIVEFKQYLKPYTQDKLYFDGVKITDVKVDKLTTFFENFEFDASNNCTL 160
+Y ++K+ L YT ++L F GV I V VDKL T+F++FE +N ++
Sbjct: 52 DYYHKYKENLPKYTTEELNFPGVSIESVTVDKLITYFDHFESMLNNGVSI 101
Score = 27.5 bits (58), Expect = 0.13
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 196 VKVRQPRLNHSPFNVNIEVD 255
+K RQ RLNH PF +I V+
Sbjct: 112 IKARQYRLNHKPFTYHIVVN 131
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 44.8 bits (101), Expect = 8e-07
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +3
Query: 255 SNVASDAVVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIF 434
+N + V+IF+ PK D+ G+P T + ELD F L G+N I + S + +
Sbjct: 493 NNTSMKGTVRIFIGPKEDERGLPFTFREQKNLMIELDKFPITLQPGKNTIEQKSTKSSV- 551
Query: 435 KEDSVPMTEIMKMLDEGK 488
++P + LDE +
Sbjct: 552 ---TIPFERTFRNLDENR 566
Score = 29.9 bits (64), Expect = 0.025
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 515 CYMPKRLMLPRGTXGGFPFQLFVFVYPFDNKGKXLAPFESFVLDNKPLGXPSGSPRC 685
C P+ +++P+G GF +LFV V + + V N+P+G S C
Sbjct: 581 CGWPQHMLIPKGNKEGFAMELFVMVSDYK---------DDRVEQNEPIGCKDASSYC 628
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 44.4 bits (100), Expect = 1e-06
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +2
Query: 11 EYIVEFKQYLKPYTQDKLYFDGVKITDVKVDKLTTFFENFEFDASNNCTL 160
+Y +K + KPY +D++ + +KI VDKL T+FE F+ +N L
Sbjct: 427 DYYHSYKMHQKPYNKDEIIYPNLKIESFTVDKLITYFEQFDTTINNGLLL 476
Score = 42.3 bits (95), Expect = 4e-06
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +3
Query: 273 AVVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVP 452
A ++IF+ PKYD + + + ++ F+E+D + L +G NKI RNS + D P
Sbjct: 514 AAIRIFIGPKYDSHHKLIEIPEDLKYFYEIDNWMLDLNSGLNKITRNSLDCFFTMNDLEP 573
Score = 37.9 bits (84), Expect = 9e-05
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 524 PKRLMLPRGTXGGFPFQLFVFVYPFDNKGKXLAP--FESFVLDNKPLGXPSGSP 679
P RL+LPRG G PFQLF++V P ++ + + D + G P P
Sbjct: 601 PGRLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSRIWGGYKFDKRSFGFPLDKP 654
Score = 32.7 bits (71), Expect = 0.003
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 196 VKVRQPRLNHSPFNVNIEVDLMSPV 270
+K+RQ RLNH PFN +I ++ P+
Sbjct: 488 IKIRQYRLNHKPFNFHITINADKPM 512
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 44.4 bits (100), Expect = 1e-06
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +2
Query: 11 EYIVEFKQYLKPYTQDKLYFDGVKITDVKVDKLTTFFENFEFDASNNCTL 160
+Y +K + KPY +D++ + +KI VDKL T+FE F+ +N L
Sbjct: 427 DYYHSYKMHQKPYNKDEIIYPNLKIESFTVDKLITYFEQFDTTINNGLLL 476
Score = 42.3 bits (95), Expect = 4e-06
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +3
Query: 273 AVVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVP 452
A ++IF+ PKYD + + + ++ F+E+D + L +G NKI RNS + D P
Sbjct: 514 AAIRIFIGPKYDSHHKLIEIPEDLKYFYEIDNWMLDLNSGLNKITRNSLDCFFTMNDLEP 573
Score = 37.9 bits (84), Expect = 9e-05
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 524 PKRLMLPRGTXGGFPFQLFVFVYPFDNKGKXLAP--FESFVLDNKPLGXPSGSP 679
P RL+LPRG G PFQLF++V P ++ + + D + G P P
Sbjct: 601 PGRLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSRIWGGYKFDKRSFGFPLDKP 654
Score = 32.7 bits (71), Expect = 0.003
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 196 VKVRQPRLNHSPFNVNIEVDLMSPV 270
+K+RQ RLNH PFN +I ++ P+
Sbjct: 488 IKIRQYRLNHKPFNFHITINADKPM 512
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 35.9 bits (79), Expect = 4e-04
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 14 YIVEFKQYLKPYTQDKLYFDGVKITDVKVDKLTTFFENFEFDASNNCTLVK 166
Y + +K+ Y+Q +L GVK V +DKL T+F+ + NN V+
Sbjct: 430 YFLRYKKLQPQYSQSELQMPGVKFESVNIDKLYTYFDKCD-TLINNAVAVE 479
Score = 35.5 bits (78), Expect = 5e-04
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 494 F*YVGEFCYMPKRLMLPRGTXGGFPFQLFVFVYPFD---NKGKXLAPFESFVLDNKPLGX 664
F Y + P+RL+LPRG G +++F F+ D K + + LD+K G
Sbjct: 593 FTYSEKMLGFPERLILPRGKPEGMRYKMFFFLSSMDESNTKSYEIPLYGKMTLDDKVFGF 652
Query: 665 PSGSP 679
P P
Sbjct: 653 PLDRP 657
Score = 34.7 bits (76), Expect = 9e-04
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Frame = +3
Query: 255 SNVASDAVVKIFLAPKYDDNGIPLT-LEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVI 431
S+ + +++IFL P +D+ + L+ + F E+D F L G N I R S+E
Sbjct: 509 SDKETKGMMRIFLGPAFDEIKHDMVYLQKYFYLFMEMDRFAVTLRPGSNSIERQSSESPF 568
Query: 432 FKEDSVPMTEIMKMLDE---GKVPFDMSE 509
+P L++ G PF SE
Sbjct: 569 TTSTIMPSDIFYDKLNKAIGGSEPFTYSE 597
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 35.9 bits (79), Expect = 4e-04
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 14 YIVEFKQYLKPYTQDKLYFDGVKITDVKVDKLTTFFENFEFDASNNCTLVK 166
Y + +K+ Y+Q +L GVK V +DKL T+F+ + NN V+
Sbjct: 430 YFLRYKKLQPQYSQSELQMPGVKFESVNIDKLYTYFDKCD-TLINNAVAVE 479
Score = 35.5 bits (78), Expect = 5e-04
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 494 F*YVGEFCYMPKRLMLPRGTXGGFPFQLFVFVYPFD---NKGKXLAPFESFVLDNKPLGX 664
F Y + P+RL+LPRG G +++F F+ D K + + LD+K G
Sbjct: 593 FTYSEKMLGFPERLILPRGKPEGMRYKMFFFLSSMDESNTKSYEIPLYGKMTLDDKVFGF 652
Query: 665 PSGSP 679
P P
Sbjct: 653 PLDRP 657
Score = 34.7 bits (76), Expect = 9e-04
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Frame = +3
Query: 255 SNVASDAVVKIFLAPKYDDNGIPLT-LEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVI 431
S+ + +++IFL P +D+ + L+ + F E+D F L G N I R S+E
Sbjct: 509 SDKETKGMMRIFLGPAFDEIKHDMVYLQKYFYLFMEMDRFAVTLRPGSNSIERQSSESPF 568
Query: 432 FKEDSVPMTEIMKMLDE---GKVPFDMSE 509
+P L++ G PF SE
Sbjct: 569 TTSTIMPSDIFYDKLNKAIGGSEPFTYSE 597
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -2
Query: 197 TSWTWLFLISSLLKYNCCWRRIQSSRRMLSIYRL 96
T++ W FL+ L C R I+ + R +++L
Sbjct: 457 TTYLWEFLLKLLQDREYCPRYIKWTNRERGVFKL 490
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +2
Query: 26 FKQYLKPYTQDKLYFDGVKITDVKV 100
+K Y Y KLY++ + I + V
Sbjct: 311 YKNYNNNYNSKKLYYNIINIEQIPV 335
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +2
Query: 26 FKQYLKPYTQDKLYFDGVKITDVKV 100
+K Y Y KLY++ + I + V
Sbjct: 322 YKNYNNNYNSKKLYYNIINIEQIPV 346
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 8.6
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 312 NGIPLTLEDNWMKFFELDWFTTKL--TAGQNKIIRNSNEFVIFK 437
NG + LE W F W T KL GQ++I++ IF+
Sbjct: 381 NGDYVVLETEWSSFIN-PW-TKKLEFVVGQHRILKGPANPDIFR 422
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.4 bits (43), Expect = 8.6
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 312 NGIPLTLEDNWMKFFELDWFTTKL--TAGQNKIIRNSNEFVIFK 437
NG + LE W F W T KL GQ++I++ IF+
Sbjct: 87 NGDYVVLETEWSSFIN-PW-TKKLEFVVGQHRILKGPANPDIFR 128
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,481
Number of Sequences: 438
Number of extensions: 3557
Number of successful extensions: 38
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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